Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:32:45 (104191): wrapper (7.7.26015): starting
02:32:45 (104191): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 02:32:45] Arguments: --nthreads 4
[2025-11-24 02:32:45] Threads: 4
[2025-11-24 02:32:45] Checking for CVMFS
[2025-11-24 02:32:45] No cvmfs_config command found, will try listing directly
[2025-11-24 02:32:45] CVMFS is ok
[2025-11-24 02:32:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:32:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:32:45] Further information can be found at the LHC@home message board.
[2025-11-24 02:32:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:32:45] Checking for apptainer binary...
[2025-11-24 02:32:45] which: no apptainer in ((null))
[2025-11-24 02:32:45] apptainer is not installed, using version from CVMFS
[2025-11-24 02:32:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:32:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-11-24 02:32:47] apptainer works
[2025-11-24 02:32:47] Set ATHENA_PROC_NUMBER=4
[2025-11-24 02:32:47] Set ATHENA_CORE_NUMBER=4
[2025-11-24 02:32:47] Starting ATLAS job with PandaID=6892544050
[2025-11-24 02:32:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:33:05]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:33:05] 2025-11-25 00:09:04,252 | INFO     | extracted standard info from prmon json
[2025-11-25 01:33:05] 2025-11-25 00:09:04,252 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:33:05] 2025-11-25 00:09:04,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:33:05] 2025-11-25 00:09:04,277 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:33:05] 2025-11-25 00:09:04,279 | INFO     | sum of square deviations: 732808720564.9092
[2025-11-25 01:33:05] 2025-11-25 00:09:04,327 | INFO     | sum of deviations: 2110029119322.079
[2025-11-25 01:33:05] 2025-11-25 00:09:04,327 | INFO     | mean x: 1763988709.5082583
[2025-11-25 01:33:05] 2025-11-25 00:09:04,328 | INFO     | mean y: 2310029.0382882883
[2025-11-25 01:33:05] 2025-11-25 00:09:04,328 | INFO     | intersect: -5076870170.057221
[2025-11-25 01:33:05] 2025-11-25 00:09:04,330 | INFO     | chi2: 4.578887774555856
[2025-11-25 01:33:05] 2025-11-25 00:09:04,332 | INFO     | sum of square deviations: 724587304654.9133
[2025-11-25 01:33:05] 2025-11-25 00:09:04,380 | INFO     | sum of deviations: 2413388917787.5454
[2025-11-25 01:33:05] 2025-11-25 00:09:04,380 | INFO     | mean x: 1763988557.0082893
[2025-11-25 01:33:05] 2025-11-25 00:09:04,380 | INFO     | mean y: 2315653.495855313
[2025-11-25 01:33:05] 2025-11-25 00:09:04,380 | INFO     | intersect: -5873015596.774045
[2025-11-25 01:33:05] 2025-11-25 00:09:04,382 | INFO     | chi2: 2.0688451628293887
[2025-11-25 01:33:05] 2025-11-25 00:09:04,383 | INFO     | current chi2=2.0688451628293887 (change=54.81773599419428 %)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,384 | INFO     | sum of square deviations: 716427610832.4078
[2025-11-25 01:33:05] 2025-11-25 00:09:04,432 | INFO     | sum of deviations: 2413848216657.1797
[2025-11-25 01:33:05] 2025-11-25 00:09:04,432 | INFO     | mean x: 1763988404.5083208
[2025-11-25 01:33:05] 2025-11-25 00:09:04,433 | INFO     | mean y: 2315660.8925869893
[2025-11-25 01:33:05] 2025-11-25 00:09:04,433 | INFO     | intersect: -5941062567.480045
[2025-11-25 01:33:05] 2025-11-25 00:09:04,435 | INFO     | chi2: 2.031146374972471
[2025-11-25 01:33:05] 2025-11-25 00:09:04,435 | INFO     | current chi2=2.031146374972471 (change=1.8222140803113653 %)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,435 | INFO     | right removable region: 1321
[2025-11-25 01:33:05] 2025-11-25 00:09:04,437 | INFO     | sum of square deviations: 724587297944.9136
[2025-11-25 01:33:05] 2025-11-25 00:09:04,485 | INFO     | sum of deviations: 1837593194009.2842
[2025-11-25 01:33:05] 2025-11-25 00:09:04,485 | INFO     | mean x: 1763988862.0082893
[2025-11-25 01:33:05] 2025-11-25 00:09:04,485 | INFO     | mean y: 2315078.428786737
[2025-11-25 01:33:05] 2025-11-25 00:09:04,485 | INFO     | intersect: -4471257583.317001
[2025-11-25 01:33:05] 2025-11-25 00:09:04,487 | INFO     | chi2: 2.716017459402043
[2025-11-25 01:33:05] 2025-11-25 00:09:04,487 | INFO     | current chi2=2.716017459402043 (change=40.683904189691745 %)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,489 | INFO     | sum of square deviations: 716427597412.408
[2025-11-25 01:33:05] 2025-11-25 00:09:04,517 | INFO     | monitor loop #5857: job 0:6892544050 is in state 'finished'
[2025-11-25 01:33:05] 2025-11-25 00:09:04,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,523 | INFO     | time since job start (81334s) is within the limit (172800.0s)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,538 | INFO     | sum of deviations: 1803836194307.7507
[2025-11-25 01:33:05] 2025-11-25 00:09:04,538 | INFO     | mean x: 1763989014.5083208
[2025-11-25 01:33:05] 2025-11-25 00:09:04,538 | INFO     | mean y: 2315709.1134644477
[2025-11-25 01:33:05] 2025-11-25 00:09:04,538 | INFO     | intersect: -4439092246.448159
[2025-11-25 01:33:05] 2025-11-25 00:09:04,540 | INFO     | chi2: 2.7120865369593177
[2025-11-25 01:33:05] 2025-11-25 00:09:04,540 | INFO     | current chi2=2.7120865369593177 (change=0.14473111831875832 %)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,540 | INFO     | left removable region: 20
[2025-11-25 01:33:05] 2025-11-25 00:09:04,542 | INFO     | sum of square deviations: 682825626662.9065
[2025-11-25 01:33:05] 2025-11-25 00:09:04,590 | INFO     | sum of deviations: 2073948321057.5337
[2025-11-25 01:33:05] 2025-11-25 00:09:04,590 | INFO     | mean x: 1763988984.008455
[2025-11-25 01:33:05] 2025-11-25 00:09:04,590 | INFO     | mean y: 2321894.3151421985
[2025-11-25 01:33:05] 2025-11-25 00:09:04,591 | INFO     | intersect: -5355447130.30055
[2025-11-25 01:33:05] 2025-11-25 00:09:04,592 | INFO     | chi2: 0.14860952272776645
[2025-11-25 01:33:05] 2025-11-25 00:09:04,593 | INFO     | current memory leak: 3.04 B/s (using 1301 data points, chi2=0.15)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,594 | INFO     | could have reported an average CPU frequency of 2595 MHz (48 samples)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,594 | INFO     | ..............................
[2025-11-25 01:33:05] 2025-11-25 00:09:04,594 | INFO     | . Timing measurements:
[2025-11-25 01:33:05] 2025-11-25 00:09:04,594 | INFO     | . get job = 0 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,595 | INFO     | . initial setup = 2 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,595 | INFO     | . payload setup = 27 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,595 | INFO     | . stage-in = 0 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,595 | INFO     | . payload execution = 81234 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,595 | INFO     | . stage-out = 2 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,595 | INFO     | . log creation = 0 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,595 | INFO     | ..............................
[2025-11-25 01:33:05] 2025-11-25 00:09:04,935 | INFO     | 
[2025-11-25 01:33:05] 2025-11-25 00:09:04,935 | INFO     | job summary report
[2025-11-25 01:33:05] 2025-11-25 00:09:04,935 | INFO     | --------------------------------------------------
[2025-11-25 01:33:05] 2025-11-25 00:09:04,936 | INFO     | PanDA job id: 6892544050
[2025-11-25 01:33:05] 2025-11-25 00:09:04,936 | INFO     | task id: 47493029
[2025-11-25 01:33:05] 2025-11-25 00:09:04,936 | INFO     | errors: (none)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:33:05] 2025-11-25 00:09:04,936 | INFO     | pilot state: finished 
[2025-11-25 01:33:05] 2025-11-25 00:09:04,936 | INFO     | transexitcode: 0
[2025-11-25 01:33:05] 2025-11-25 00:09:04,936 | INFO     | exeerrorcode: 0
[2025-11-25 01:33:05] 2025-11-25 00:09:04,937 | INFO     | exeerrordiag: 
[2025-11-25 01:33:05] 2025-11-25 00:09:04,937 | INFO     | exitcode: 0
[2025-11-25 01:33:05] 2025-11-25 00:09:04,937 | INFO     | exitmsg: OK
[2025-11-25 01:33:05] 2025-11-25 00:09:04,937 | INFO     | cpuconsumptiontime: 318295 s
[2025-11-25 01:33:05] 2025-11-25 00:09:04,937 | INFO     | nevents: 1000
[2025-11-25 01:33:05] 2025-11-25 00:09:04,937 | INFO     | neventsw: 0
[2025-11-25 01:33:05] 2025-11-25 00:09:04,937 | INFO     | pid: 115146
[2025-11-25 01:33:05] 2025-11-25 00:09:04,938 | INFO     | pgrp: 115146
[2025-11-25 01:33:05] 2025-11-25 00:09:04,938 | INFO     | corecount: 4
[2025-11-25 01:33:05] 2025-11-25 00:09:04,938 | INFO     | event service: False
[2025-11-25 01:33:05] 2025-11-25 00:09:04,938 | INFO     | sizes: {0: 2298807, 1: 2298807, 12: 2298835, 22: 2298863, 23: 2299153, 33: 2299181, 81266: 2361863, 81269: 2371670, 81271: 2371726, 81279: 2371972}
[2025-11-25 01:33:05] 2025-11-25 00:09:04,938 | INFO     | --------------------------------------------------
[2025-11-25 01:33:05] 2025-11-25 00:09:04,938 | INFO     | 
[2025-11-25 01:33:05] 2025-11-25 00:09:04,938 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-11-25 01:33:05] 2025-11-25 00:09:04,957 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,960 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:33:05] 2025-11-25 00:09:04,960 | INFO     | job 6892544050 has completed (purged errors)
[2025-11-25 01:33:05] 2025-11-25 00:09:04,960 | INFO     | overall cleanup function is called
[2025-11-25 01:33:05] 2025-11-25 00:09:05,974 | INFO     | --- collectZombieJob: --- 10, [115146]
[2025-11-25 01:33:05] 2025-11-25 00:09:05,974 | INFO     | zombie collector waiting for pid 115146
[2025-11-25 01:33:05] 2025-11-25 00:09:05,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:33:05] 2025-11-25 00:09:05,975 | INFO     | collected zombie processes
[2025-11-25 01:33:05] 2025-11-25 00:09:05,975 | INFO     | will attempt to kill all subprocesses of pid=115146
[2025-11-25 01:33:05] 2025-11-25 00:09:06,331 | INFO     | process IDs to be killed: [115146] (in reverse order)
[2025-11-25 01:33:05] 2025-11-25 00:09:06,416 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:33:05] 2025-11-25 00:09:06,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:33:05] 2025-11-25 00:09:06,425 | INFO     | did not find any defunct processes belonging to 115146
[2025-11-25 01:33:05] 2025-11-25 00:09:06,433 | INFO     | did not find any defunct processes belonging to 115146
[2025-11-25 01:33:05] 2025-11-25 00:09:06,434 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:33:05] 2025-11-25 00:09:06,435 | INFO     | ready for new job
[2025-11-25 01:33:05] 2025-11-25 00:09:06,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:33:05] 2025-11-25 00:09:06,441 | INFO     | ***************************************
[2025-11-25 01:33:05] 2025-11-25 00:09:06,441 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:33:05] 2025-11-25 00:09:06,441 | INFO     | ***************************************
[2025-11-25 01:33:05] 2025-11-25 00:09:06,441 | INFO     | 
[2025-11-25 01:33:05] 2025-11-25 00:09:06,444 | INFO     | architecture information:
[2025-11-25 01:33:05] 2025-11-25 00:09:06,444 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:33:05] 2025-11-25 00:09:06,455 | INFO     | cat /etc/os-release:
[2025-11-25 01:33:05] NAME="CentOS Linux"
[2025-11-25 01:33:05] VERSION="7 (Core)"
[2025-11-25 01:33:05] ID="centos"
[2025-11-25 01:33:05] ID_LIKE="rhel fedora"
[2025-11-25 01:33:05] VERSION_ID="7"
[2025-11-25 01:33:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:33:05] ANSI_COLOR="0;31"
[2025-11-25 01:33:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:33:05] HOME_URL="https://www.centos.org/"
[2025-11-25 01:33:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:33:05] 
[2025-11-25 01:33:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:33:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:33:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:33:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:33:05] 
[2025-11-25 01:33:05] 2025-11-25 00:09:06,456 | INFO     | ***************************************
[2025-11-25 01:33:05] 2025-11-25 00:09:06,958 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-11-25 01:33:05] 2025-11-25 00:09:06,971 | INFO     | sufficient remaining disk space (1662859083776 B)
[2025-11-25 01:33:05] 2025-11-25 00:09:06,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:33:05] 2025-11-25 00:09:06,972 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:33:05] 2025-11-25 00:09:06,972 | INFO     | update_server=False
[2025-11-25 01:33:05] 2025-11-25 00:09:06,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:33:05] 2025-11-25 00:09:07,020 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 01:33:05] 2025-11-25 00:09:07,020 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 01:33:05] 2025-11-25 00:09:07,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:33:05] 2025-11-25 00:09:07,020 | INFO     | will abort loop
[2025-11-25 01:33:05] 2025-11-25 00:09:07,267 | INFO     | all data control threads have been joined
[2025-11-25 01:33:05] 2025-11-25 00:09:07,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:33:05] 2025-11-25 00:09:07,611 | INFO     | all payload control threads have been joined
[2025-11-25 01:33:05] 2025-11-25 00:09:07,767 | INFO     | all job control threads have been joined
[2025-11-25 01:33:05] 2025-11-25 00:09:07,978 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:08,025 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:08,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:33:05] 2025-11-25 00:09:08,272 | INFO     | [data] control thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:08,297 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:08,459 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:08,616 | INFO     | [payload] control thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:08,772 | INFO     | [job] control thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:08,825 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:09,130 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:09,218 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:09,409 | INFO     | [job] validate thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:09,452 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:09,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:33:05] 2025-11-25 00:09:10,131 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:10,721 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:11,288 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:17,396 | INFO     | job.realtimelogging is not enabled
[2025-11-25 01:33:05] 2025-11-25 00:09:18,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:33:05] 2025-11-25 00:09:38,047 | INFO     | PID=108025 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 01:33:05] 2025-11-25 00:09:38,047 | INFO     | .. there are 2 such processes running
[2025-11-25 01:33:05] 2025-11-25 00:09:38,048 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:33:05] 2025-11-25 00:09:38,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:33:05] 2025-11-25 00:09:38,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:33:05] 2025-11-25 00:09:45,440 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:33:05] 2025-11-25 00:09:46,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22620207081280)>', '<ExcThread(monitor, started 22619963217664)>']
[2025-11-25 01:33:05] 2025-11-25 00:09:47,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:33:05] 2025-11-25 00:09:47,091 | INFO     | [monitor] control thread has ended
[2025-11-25 01:33:05] 2025-11-25 00:09:51,398 | INFO     | all workflow threads have been joined
[2025-11-25 01:33:05] 2025-11-25 00:09:51,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:33:05] 2025-11-25 00:09:51,399 | INFO     | traces error code: 0
[2025-11-25 01:33:05] 2025-11-25 00:09:51,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:33:05] 2025-11-25 00:09:51,530 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:33:05] 2025-11-25 00:09:51,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:33:05] 2025-11-25 00:09:51,535 [wrapper] pilotpid: 108025
[2025-11-25 01:33:05] 2025-11-25 00:09:51,537 [wrapper] Pilot exit status: 0
[2025-11-25 01:33:05] 2025-11-25 00:09:51,546 [wrapper] pandaids: 6892544050
[2025-11-25 01:33:05] 2025-11-25 00:09:51,605 [wrapper] cleanup supervisor_pilot 1087885 108026
[2025-11-25 01:33:05] 2025-11-25 00:09:51,608 [wrapper] Test setup, not cleaning
[2025-11-25 01:33:05] 2025-11-25 00:09:51,611 [wrapper] apfmon messages muted
[2025-11-25 01:33:05] 2025-11-25 00:09:51,614 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:33:05] 2025-11-25 00:09:51,616 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:33:05]  *** Error codes and diagnostics ***
[2025-11-25 01:33:05]     "exeErrorCode": 0,
[2025-11-25 01:33:05]     "exeErrorDiag": "",
[2025-11-25 01:33:05]     "pilotErrorCode": 0,
[2025-11-25 01:33:05]     "pilotErrorDiag": "",
[2025-11-25 01:33:05]  *** Listing of results directory ***
[2025-11-25 01:33:05] total 1319448
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc    576529 Nov 19 09:00 pilot3.tar.gz
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc      5112 Nov 19 09:05 queuedata.json
[2025-11-25 01:33:05] -rwx------ 1 boinc boinc     36292 Nov 19 09:06 runpilot2-wrapper.sh
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc       100 Nov 24 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:33:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 02:32 run_atlas
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc       105 Nov 24 02:32 job.xml
[2025-11-25 01:33:05] -rw-r--r-- 2 boinc boinc 409848390 Nov 24 02:32 EVNT.47493027._000271.pool.root.1
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc      6421 Nov 24 02:32 init_data.xml
[2025-11-25 01:33:05] -rw-r--r-- 2 boinc boinc     15120 Nov 24 02:32 start_atlas.sh
[2025-11-25 01:33:05] drwxrwx--x 2 boinc boinc      4096 Nov 24 02:32 shared
[2025-11-25 01:33:05] -rw-r--r-- 2 boinc boinc    590097 Nov 24 02:32 input.tar.gz
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc         0 Nov 24 02:32 boinc_lockfile
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc      2773 Nov 24 02:32 pandaJob.out
[2025-11-25 01:33:05] -rw------- 1 boinc boinc    989786 Nov 24 02:33 agis_schedconf.cvmfs.json
[2025-11-25 01:33:05] drwx------ 5 boinc boinc      4096 Nov 24 02:33 pilot3
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc       532 Nov 25 01:01 boinc_task_state.xml
[2025-11-25 01:33:05] -rw------- 1 boinc boinc 910623820 Nov 25 01:08 HITS.47493029._002667.pool.root.1
[2025-11-25 01:33:05] -rw------- 1 boinc boinc      1054 Nov 25 01:08 memory_monitor_summary.json
[2025-11-25 01:33:05] -rw------- 1 boinc boinc   1516227 Nov 25 01:08 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:33:05] -rw------- 1 boinc boinc   1991866 Nov 25 01:08 log.47493029._002667.job.log.tgz.1
[2025-11-25 01:33:05] -rw------- 1 boinc boinc      8654 Nov 25 01:09 heartbeat.json
[2025-11-25 01:33:05] -rw------- 1 boinc boinc        95 Nov 25 01:09 pilot_heartbeat.json
[2025-11-25 01:33:05] -rw------- 1 boinc boinc      5091 Nov 25 01:09 pilotlog.txt
[2025-11-25 01:33:05] -rw------- 1 boinc boinc  11367270 Nov 25 01:09 log.47493029._002667.job.log.1
[2025-11-25 01:33:05] -rw------- 1 boinc boinc       353 Nov 25 01:09 output.list
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc       620 Nov 25 01:09 runtime_log
[2025-11-25 01:33:05] -rw------- 1 boinc boinc  13383680 Nov 25 01:09 result.tar.gz
[2025-11-25 01:33:05] -rw------- 1 boinc boinc       671 Nov 25 01:09 vbdNDmUOsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtyGKDmgkM5Wm.diag
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc      9070 Nov 25 01:09 runtime_log.err
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc        28 Nov 25 01:33 wrapper_checkpoint.txt
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc      8192 Nov 25 01:33 boinc_mmap_file
[2025-11-25 01:33:05] -rw-r--r-- 1 boinc boinc     21059 Nov 25 01:33 stderr.txt
[2025-11-25 01:33:05] HITS file was successfully produced:
[2025-11-25 01:33:05] -rw------- 1 boinc boinc 910623820 Nov 25 01:08 shared/HITS.pool.root.1
[2025-11-25 01:33:05]  *** Contents of shared directory: ***
[2025-11-25 01:33:05] total 1303204
[2025-11-25 01:33:05] -rw-r--r-- 2 boinc boinc 409848390 Nov 24 02:32 ATLAS.root_0
[2025-11-25 01:33:05] -rw-r--r-- 2 boinc boinc     15120 Nov 24 02:32 start_atlas.sh
[2025-11-25 01:33:05] -rw-r--r-- 2 boinc boinc    590097 Nov 24 02:32 input.tar.gz
[2025-11-25 01:33:05] -rw------- 1 boinc boinc 910623820 Nov 25 01:08 HITS.pool.root.1
[2025-11-25 01:33:05] -rw------- 1 boinc boinc  13383680 Nov 25 01:09 result.tar.gz
01:33:07 (104191): run_atlas exited; CPU time 321223.985843
01:33:07 (104191): called boinc_finish(0)

</stderr_txt>
]]>

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