Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:30:58 (2536445): wrapper (7.7.26015): starting
10:30:58 (2536445): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 10:30:58] Arguments: --nthreads 8
[2025-11-19 10:30:58] Threads: 8
[2025-11-19 10:30:58] Checking for CVMFS
[2025-11-19 10:30:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 10:30:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 10:30:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 10:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 10:30:58] 2.13.2.0 8445 25442 201736 153049 0 362 38391566 40960001 22070 16776704 0 40604881 99.744 19855172 31813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 10:30:58] CVMFS is ok
[2025-11-19 10:30:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 10:30:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 10:30:58] Further information can be found at the LHC@home message board.
[2025-11-19 10:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 10:30:58] Checking for apptainer binary...
[2025-11-19 10:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 10:30:58] Running /usr/bin/apptainer --version
[2025-11-19 10:30:58] apptainer version 1.4.4-1.el9
[2025-11-19 10:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 10:30:58] c-212-2.aglt2.org
[2025-11-19 10:30:58] apptainer works
[2025-11-19 10:30:58] Set ATHENA_PROC_NUMBER=8
[2025-11-19 10:30:58] Set ATHENA_CORE_NUMBER=8
[2025-11-19 10:30:58] Starting ATLAS job with PandaID=6892522616
[2025-11-19 10:30:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 02:32:15]  *** The last 200 lines of the pilot log: ***
[2025-11-20 02:32:15] 2025-11-20 07:31:41,247 | INFO     | monitor loop #4033: job 0:6892522616 is in state 'finished'
[2025-11-20 02:32:15] 2025-11-20 07:31:41,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 02:32:15] 2025-11-20 07:31:41,650 | INFO     | time since job start (57629s) is within the limit (172800.0s)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,019 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 02:32:15] 2025-11-20 07:31:43,025 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3090.9324687499993
[2025-11-20 02:32:15] 2025-11-20 07:31:43,040 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6892522616/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,041 | INFO     | extracted standard info from prmon json
[2025-11-20 02:32:15] 2025-11-20 07:31:43,041 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 02:32:15] 2025-11-20 07:31:43,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 02:32:15] 2025-11-20 07:31:43,056 | INFO     | fitting pss+swap vs Time
[2025-11-20 02:32:15] 2025-11-20 07:31:43,057 | INFO     | sum of square deviations: 260851777869.7953
[2025-11-20 02:32:15] 2025-11-20 07:31:43,076 | INFO     | sum of deviations: 2766712938748.4546
[2025-11-20 02:32:15] 2025-11-20 07:31:43,076 | INFO     | mean x: 1763595065.5667372
[2025-11-20 02:32:15] 2025-11-20 07:31:43,077 | INFO     | mean y: 2794791.1991525423
[2025-11-20 02:32:15] 2025-11-20 07:31:43,077 | INFO     | intersect: -18702698905.117397
[2025-11-20 02:32:15] 2025-11-20 07:31:43,078 | INFO     | chi2: 6.056698927688089
[2025-11-20 02:32:15] 2025-11-20 07:31:43,079 | INFO     | sum of square deviations: 256729105369.0757
[2025-11-20 02:32:15] 2025-11-20 07:31:43,096 | INFO     | sum of deviations: 3048949025920.3237
[2025-11-20 02:32:15] 2025-11-20 07:31:43,096 | INFO     | mean x: 1763594913.0724175
[2025-11-20 02:32:15] 2025-11-20 07:31:43,097 | INFO     | mean y: 2805228.7305644304
[2025-11-20 02:32:15] 2025-11-20 07:31:43,097 | INFO     | intersect: -20941882692.80451
[2025-11-20 02:32:15] 2025-11-20 07:31:43,097 | INFO     | chi2: 3.2184432696495824
[2025-11-20 02:32:15] 2025-11-20 07:31:43,098 | INFO     | current chi2=3.2184432696495824 (change=46.86142883978387 %)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,098 | INFO     | sum of square deviations: 252649936638.25394
[2025-11-20 02:32:15] 2025-11-20 07:31:43,116 | INFO     | sum of deviations: 3049103916245.7417
[2025-11-20 02:32:15] 2025-11-20 07:31:43,116 | INFO     | mean x: 1763594760.5749464
[2025-11-20 02:32:15] 2025-11-20 07:31:43,116 | INFO     | mean y: 2805229.296573876
[2025-11-20 02:32:15] 2025-11-20 07:31:43,116 | INFO     | intersect: -21281125266.35567
[2025-11-20 02:32:15] 2025-11-20 07:31:43,117 | INFO     | chi2: 3.101781250567304
[2025-11-20 02:32:15] 2025-11-20 07:31:43,117 | INFO     | current chi2=3.101781250567304 (change=3.624796502781923 %)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,117 | INFO     | right removable region: 933
[2025-11-20 02:32:15] 2025-11-20 07:31:43,118 | INFO     | sum of square deviations: 256728491099.07578
[2025-11-20 02:32:15] 2025-11-20 07:31:43,136 | INFO     | sum of deviations: 2472698004703.4014
[2025-11-20 02:32:15] 2025-11-20 07:31:43,136 | INFO     | mean x: 1763595218.0724175
[2025-11-20 02:32:15] 2025-11-20 07:31:43,136 | INFO     | mean y: 2805658.2587859426
[2025-11-20 02:32:15] 2025-11-20 07:31:43,136 | INFO     | intersect: -16983382193.985502
[2025-11-20 02:32:15] 2025-11-20 07:31:43,137 | INFO     | chi2: 3.4207212097497397
[2025-11-20 02:32:15] 2025-11-20 07:31:43,137 | INFO     | current chi2=3.4207212097497397 (change=43.52168977539935 %)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,138 | INFO     | sum of square deviations: 252649051040.2539
[2025-11-20 02:32:15] 2025-11-20 07:31:43,155 | INFO     | sum of deviations: 2361880384786.126
[2025-11-20 02:32:15] 2025-11-20 07:31:43,155 | INFO     | mean x: 1763595370.5749464
[2025-11-20 02:32:15] 2025-11-20 07:31:43,155 | INFO     | mean y: 2809794.5267665954
[2025-11-20 02:32:15] 2025-11-20 07:31:43,155 | INFO     | intersect: -16484096826.772684
[2025-11-20 02:32:15] 2025-11-20 07:31:43,156 | INFO     | chi2: 3.07563403748755
[2025-11-20 02:32:15] 2025-11-20 07:31:43,156 | INFO     | current chi2=3.07563403748755 (change=10.088140807225749 %)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,156 | INFO     | left removable region: 20
[2025-11-20 02:32:15] 2025-11-20 07:31:43,157 | INFO     | sum of square deviations: 235988058232.5059
[2025-11-20 02:32:15] 2025-11-20 07:31:43,174 | INFO     | sum of deviations: 2537343100135.3896
[2025-11-20 02:32:15] 2025-11-20 07:31:43,174 | INFO     | mean x: 1763595340.0843372
[2025-11-20 02:32:15] 2025-11-20 07:31:43,174 | INFO     | mean y: 2824092.4884994524
[2025-11-20 02:32:15] 2025-11-20 07:31:43,174 | INFO     | intersect: -18959349252.67756
[2025-11-20 02:32:15] 2025-11-20 07:31:43,175 | INFO     | chi2: 0.084823395887522
[2025-11-20 02:32:15] 2025-11-20 07:31:43,175 | INFO     | current memory leak: 10.75 B/s (using 913 data points, chi2=0.08)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,176 | INFO     | could have reported an average CPU frequency of 3026 MHz (35 samples)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,176 | INFO     | ..............................
[2025-11-20 02:32:15] 2025-11-20 07:31:43,176 | INFO     | . Timing measurements:
[2025-11-20 02:32:15] 2025-11-20 07:31:43,176 | INFO     | . get job = 0 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,177 | INFO     | . initial setup = 2 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,177 | INFO     | . payload setup = 8 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,177 | INFO     | . stage-in = 0 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,177 | INFO     | . payload execution = 57589 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,177 | INFO     | . stage-out = 3 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,177 | INFO     | . log creation = 0 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,177 | INFO     | ..............................
[2025-11-20 02:32:15] 2025-11-20 07:31:43,524 | INFO     | 
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | job summary report
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | --------------------------------------------------
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | PanDA job id: 6892522616
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | task id: 47493029
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | errors: (none)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | pilot state: finished 
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | transexitcode: 0
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | exeerrorcode: 0
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | exeerrordiag: 
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | exitcode: 0
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | exitmsg: OK
[2025-11-20 02:32:15] 2025-11-20 07:31:43,525 | INFO     | cpuconsumptiontime: 204239 s
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | nevents: 1000
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | neventsw: 0
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | pid: 2547820
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | pgrp: 2547820
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | corecount: 8
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | event service: False
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | sizes: {0: 2296969, 1: 2297224, 7: 2297486, 12: 2297514, 57601: 2349352, 57605: 2358530, 57615: 2358720}
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | --------------------------------------------------
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | 
[2025-11-20 02:32:15] 2025-11-20 07:31:43,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-20 02:32:15] 2025-11-20 07:31:43,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,552 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,552 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,552 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 02:32:15] 2025-11-20 07:31:43,554 | INFO     | job 6892522616 has completed (purged errors)
[2025-11-20 02:32:15] 2025-11-20 07:31:43,554 | INFO     | overall cleanup function is called
[2025-11-20 02:32:15] 2025-11-20 07:31:44,571 | INFO     | --- collectZombieJob: --- 10, [2547820]
[2025-11-20 02:32:15] 2025-11-20 07:31:44,572 | INFO     | zombie collector waiting for pid 2547820
[2025-11-20 02:32:15] 2025-11-20 07:31:44,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 02:32:15] 2025-11-20 07:31:44,572 | INFO     | collected zombie processes
[2025-11-20 02:32:15] 2025-11-20 07:31:44,572 | INFO     | will attempt to kill all subprocesses of pid=2547820
[2025-11-20 02:32:15] 2025-11-20 07:31:44,931 | INFO     | process IDs to be killed: [2547820] (in reverse order)
[2025-11-20 02:32:15] 2025-11-20 07:31:45,046 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 02:32:15] 2025-11-20 07:31:45,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 02:32:15] 2025-11-20 07:31:45,062 | INFO     | did not find any defunct processes belonging to 2547820
[2025-11-20 02:32:15] 2025-11-20 07:31:45,078 | INFO     | did not find any defunct processes belonging to 2547820
[2025-11-20 02:32:15] 2025-11-20 07:31:45,080 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 02:32:15] 2025-11-20 07:31:45,080 | INFO     | ready for new job
[2025-11-20 02:32:15] 2025-11-20 07:31:45,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 02:32:15] 2025-11-20 07:31:45,086 | INFO     | ***************************************
[2025-11-20 02:32:15] 2025-11-20 07:31:45,087 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 02:32:15] 2025-11-20 07:31:45,088 | INFO     | ***************************************
[2025-11-20 02:32:15] 2025-11-20 07:31:45,088 | INFO     | 
[2025-11-20 02:32:15] 2025-11-20 07:31:45,091 | INFO     | architecture information:
[2025-11-20 02:32:15] 2025-11-20 07:31:45,092 | INFO     | executing command: cat /etc/os-release
[2025-11-20 02:32:15] 2025-11-20 07:31:45,106 | INFO     | cat /etc/os-release:
[2025-11-20 02:32:15] NAME="CentOS Linux"
[2025-11-20 02:32:15] VERSION="7 (Core)"
[2025-11-20 02:32:15] ID="centos"
[2025-11-20 02:32:15] ID_LIKE="rhel fedora"
[2025-11-20 02:32:15] VERSION_ID="7"
[2025-11-20 02:32:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 02:32:15] ANSI_COLOR="0;31"
[2025-11-20 02:32:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 02:32:15] HOME_URL="https://www.centos.org/"
[2025-11-20 02:32:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 02:32:15] 
[2025-11-20 02:32:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 02:32:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 02:32:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 02:32:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 02:32:15] 
[2025-11-20 02:32:15] 2025-11-20 07:31:45,106 | INFO     | ***************************************
[2025-11-20 02:32:15] 2025-11-20 07:31:45,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-20 02:32:15] 2025-11-20 07:31:45,632 | INFO     | sufficient remaining disk space (125587947520 B)
[2025-11-20 02:32:15] 2025-11-20 07:31:45,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 02:32:15] 2025-11-20 07:31:45,633 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 02:32:15] 2025-11-20 07:31:45,633 | INFO     | update_server=False
[2025-11-20 02:32:15] 2025-11-20 07:31:45,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 02:32:15] 2025-11-20 07:31:45,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 02:32:15] 2025-11-20 07:31:45,633 | INFO     | aborting loop
[2025-11-20 02:32:15] 2025-11-20 07:31:45,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 02:32:15] 2025-11-20 07:31:46,104 | INFO     | all data control threads have been joined
[2025-11-20 02:32:15] 2025-11-20 07:31:46,256 | INFO     | all job control threads have been joined
[2025-11-20 02:32:15] 2025-11-20 07:31:46,319 | INFO     | all payload control threads have been joined
[2025-11-20 02:32:15] 2025-11-20 07:31:46,639 | INFO     | [job] retrieve thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:46,640 | INFO     | [job] job monitor thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:46,874 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:46,899 | INFO     | [payload] failed_post thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,110 | INFO     | [data] control thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,262 | INFO     | [job] control thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,324 | INFO     | [payload] control thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,544 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,717 | INFO     | [data] copytool_out thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,747 | INFO     | [data] copytool_in thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,846 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:47,942 | INFO     | [job] validate thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:48,085 | INFO     | [payload] validate_post thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:48,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 02:32:15] 2025-11-20 07:31:48,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 02:32:15] 2025-11-20 07:31:48,356 | INFO     | [monitor] cgroup control has ended
[2025-11-20 02:32:15] 2025-11-20 07:31:49,268 | INFO     | [job] queue monitor thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:52,270 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 02:32:15] 2025-11-20 07:31:53,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874891970368)>', '<ExcThread(monitor, started 139874233464576)>']
[2025-11-20 02:32:15] 2025-11-20 07:31:58,374 | INFO     | all workflow threads have been joined
[2025-11-20 02:32:15] 2025-11-20 07:31:58,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 02:32:15] 2025-11-20 07:31:58,375 | INFO     | traces error code: 0
[2025-11-20 02:32:15] 2025-11-20 07:31:58,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 02:32:15] 2025-11-20 07:32:15,158 | INFO     | PID=2540125 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 02:32:15] 2025-11-20 07:32:15,158 | INFO     | .. there are 15 such processes running
[2025-11-20 02:32:15] 2025-11-20 07:32:15,158 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 02:32:15] 2025-11-20 07:32:15,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 02:32:15] 2025-11-20 07:32:15,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 02:32:15] 2025-11-20 07:32:15,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 02:32:15] 2025-11-20 07:32:15,159 | INFO     | [monitor] control thread has ended
[2025-11-20 02:32:15] 2025-11-20 07:32:15,280 [wrapper] ==== pilot stdout END ====
[2025-11-20 02:32:15] 2025-11-20 07:32:15,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 02:32:15] 2025-11-20 07:32:15,285 [wrapper] pilotpid: 2540125
[2025-11-20 02:32:15] 2025-11-20 07:32:15,288 [wrapper] Pilot exit status: 0
[2025-11-20 02:32:15] 2025-11-20 07:32:15,306 [wrapper] pandaids: 6892522616
[2025-11-20 02:32:15] 2025-11-20 07:32:15,394 [wrapper] cleanup supervisor_pilot  431303 2540126
[2025-11-20 02:32:15] 2025-11-20 07:32:15,401 [wrapper] Test setup, not cleaning
[2025-11-20 02:32:15] 2025-11-20 07:32:15,405 [wrapper] apfmon messages muted
[2025-11-20 02:32:15] 2025-11-20 07:32:15,409 [wrapper] ==== wrapper stdout END ====
[2025-11-20 02:32:15] 2025-11-20 07:32:15,413 [wrapper] ==== wrapper stderr END ====
[2025-11-20 02:32:15]  *** Error codes and diagnostics ***
[2025-11-20 02:32:15]     "exeErrorCode": 0,
[2025-11-20 02:32:15]     "exeErrorDiag": "",
[2025-11-20 02:32:15]     "pilotErrorCode": 0,
[2025-11-20 02:32:15]     "pilotErrorDiag": "",
[2025-11-20 02:32:15]  *** Listing of results directory ***
[2025-11-20 02:32:15] total 1309496
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:04 queuedata.json
[2025-11-20 02:32:15] -rwx------. 1 boincer umatlas     36292 Nov 19 02:05 runpilot2-wrapper.sh
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas       100 Nov 19 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 02:32:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 10:30 run_atlas
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas       105 Nov 19 10:30 job.xml
[2025-11-20 02:32:15] -rw-r--r--. 2 boincer umatlas 410021191 Nov 19 10:30 EVNT.47493027._000046.pool.root.1
[2025-11-20 02:32:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 10:30 shared
[2025-11-20 02:32:15] -rw-r--r--. 2 boincer umatlas    590095 Nov 19 10:30 input.tar.gz
[2025-11-20 02:32:15] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 10:30 start_atlas.sh
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas         0 Nov 19 10:30 boinc_lockfile
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas      2771 Nov 19 10:30 pandaJob.out
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas    989434 Nov 19 10:31 agis_schedconf.cvmfs.json
[2025-11-20 02:32:15] drwx------. 5 boincer umatlas      4096 Nov 19 10:31 pilot3
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas       533 Nov 20 02:23 boinc_task_state.xml
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas 906829908 Nov 20 02:30 HITS.47493029._000414.pool.root.1
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas      6947 Nov 20 02:31 init_data.xml
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas        95 Nov 20 02:31 pilot_heartbeat.json
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas      1069 Nov 20 02:31 memory_monitor_summary.json
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas   1525063 Nov 20 02:31 agis_ddmendpoints.agis.ALL.json
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas   2155391 Nov 20 02:31 log.47493029._000414.job.log.tgz.1
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas      8621 Nov 20 02:31 heartbeat.json
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 02:32 boinc_mmap_file
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas        29 Nov 20 02:32 wrapper_checkpoint.txt
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas       823 Nov 20 02:32 pilotlog.txt
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas   7919708 Nov 20 02:32 log.47493029._000414.job.log.1
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas       353 Nov 20 02:32 output.list
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas       620 Nov 20 02:32 runtime_log
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas  10096640 Nov 20 02:32 result.tar.gz
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas      8699 Nov 20 02:32 runtime_log.err
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas       663 Nov 20 02:32 B8xMDmLRrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEdGKDm3CgmOm.diag
[2025-11-20 02:32:15] -rw-r--r--. 1 boincer umatlas     21327 Nov 20 02:32 stderr.txt
[2025-11-20 02:32:15] HITS file was successfully produced:
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas 906829908 Nov 20 02:30 shared/HITS.pool.root.1
[2025-11-20 02:32:15]  *** Contents of shared directory: ***
[2025-11-20 02:32:15] total 1296456
[2025-11-20 02:32:15] -rw-r--r--. 2 boincer umatlas 410021191 Nov 19 10:30 ATLAS.root_0
[2025-11-20 02:32:15] -rw-r--r--. 2 boincer umatlas    590095 Nov 19 10:30 input.tar.gz
[2025-11-20 02:32:15] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 10:30 start_atlas.sh
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas 906829908 Nov 20 02:30 HITS.pool.root.1
[2025-11-20 02:32:15] -rw-------. 1 boincer umatlas  10096640 Nov 20 02:32 result.tar.gz
02:32:16 (2536445): run_atlas exited; CPU time 204489.628258
02:32:16 (2536445): called boinc_finish(0)

</stderr_txt>
]]>

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