Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:54:52 (1014996): wrapper (7.7.26015): starting
22:54:52 (1014996): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 22:54:52] Arguments: --nthreads 4
[2025-11-25 22:54:52] Threads: 4
[2025-11-25 22:54:52] Checking for CVMFS
[2025-11-25 22:54:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:54:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:54:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:54:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:54:52] 2.12.7.0 1036173 10758 67116 153298 2 81 5744204 6144001 3284 130560 139 12883857 99.9395 909607 1000 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-11-25 22:54:52] CVMFS is ok
[2025-11-25 22:54:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:54:52] Checking for apptainer binary...
[2025-11-25 22:54:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:54:52] Running /usr/bin/apptainer --version
[2025-11-25 22:54:52] apptainer version 1.4.2
[2025-11-25 22:54:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:54:52] Ryzen5
[2025-11-25 22:54:52] apptainer works
[2025-11-25 22:54:52] Set ATHENA_PROC_NUMBER=4
[2025-11-25 22:54:52] Set ATHENA_CORE_NUMBER=4
[2025-11-25 22:54:52] Starting ATLAS job with PandaID=6892537046
[2025-11-25 22:54:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/boinc4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:23:14]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:23:14] 2025-11-26 09:22:23,003 | INFO     | PID=1018767 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:23:14] 2025-11-26 09:22:23,003 | INFO     | .. there are 5 such processes running
[2025-11-26 10:23:14] 2025-11-26 09:22:23,410 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 10:23:14] 2025-11-26 09:22:23,412 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3943.45825
[2025-11-26 10:23:14] 2025-11-26 09:22:23,414 | INFO     | using path: /var/lib/boinc/boinc4/slots/0/PanDA_Pilot-6892537046/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,415 | INFO     | extracted standard info from prmon json
[2025-11-26 10:23:14] 2025-11-26 09:22:23,415 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:23:14] 2025-11-26 09:22:23,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:23:14] 2025-11-26 09:22:23,423 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:23:14] 2025-11-26 09:22:23,424 | INFO     | sum of square deviations: 95789423925.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,431 | INFO     | sum of deviations: 462997611153.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,431 | INFO     | mean x: 1764128307.5
[2025-11-26 10:23:14] 2025-11-26 09:22:23,431 | INFO     | mean y: 2348788.020710059
[2025-11-26 10:23:14] 2025-11-26 09:22:23,431 | INFO     | intersect: -8524554900.004418
[2025-11-26 10:23:14] 2025-11-26 09:22:23,432 | INFO     | chi2: 2.578350101572383
[2025-11-26 10:23:14] 2025-11-26 09:22:23,432 | INFO     | sum of square deviations: 93679598320.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,440 | INFO     | sum of deviations: 546345951366.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,440 | INFO     | mean x: 1764128155.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,440 | INFO     | mean y: 2354795.6885245903
[2025-11-26 10:23:14] 2025-11-26 09:22:23,440 | INFO     | intersect: -10286163648.665768
[2025-11-26 10:23:14] 2025-11-26 09:22:23,441 | INFO     | chi2: 1.6107483293759173
[2025-11-26 10:23:14] 2025-11-26 09:22:23,441 | INFO     | current chi2=1.6107483293759173 (change=37.52794361038801 %)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,441 | INFO     | sum of square deviations: 91600982602.5
[2025-11-26 10:23:14] 2025-11-26 09:22:23,448 | INFO     | sum of deviations: 539078233825.49994
[2025-11-26 10:23:14] 2025-11-26 09:22:23,449 | INFO     | mean x: 1764128002.5
[2025-11-26 10:23:14] 2025-11-26 09:22:23,449 | INFO     | mean y: 2354262.316816817
[2025-11-26 10:23:14] 2025-11-26 09:22:23,449 | INFO     | intersect: -10379663275.165934
[2025-11-26 10:23:14] 2025-11-26 09:22:23,449 | INFO     | chi2: 1.609436313362552
[2025-11-26 10:23:14] 2025-11-26 09:22:23,449 | INFO     | current chi2=1.609436313362552 (change=0.08145381804453708 %)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,449 | INFO     | right removable region: 665
[2025-11-26 10:23:14] 2025-11-26 09:22:23,450 | INFO     | sum of square deviations: 93679598320.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,458 | INFO     | sum of deviations: 356490630456.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,458 | INFO     | mean x: 1764128460.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,458 | INFO     | mean y: 2356462.8509687036
[2025-11-26 10:23:14] 2025-11-26 09:22:23,458 | INFO     | intersect: -6710901046.671329
[2025-11-26 10:23:14] 2025-11-26 09:22:23,458 | INFO     | chi2: 1.0956637448699158
[2025-11-26 10:23:14] 2025-11-26 09:22:23,458 | INFO     | current chi2=1.0956637448699158 (change=57.50523777970511 %)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,459 | INFO     | sum of square deviations: 91600982602.5
[2025-11-26 10:23:14] 2025-11-26 09:22:23,466 | INFO     | sum of deviations: 338266170385.5
[2025-11-26 10:23:14] 2025-11-26 09:22:23,466 | INFO     | mean x: 1764128612.5
[2025-11-26 10:23:14] 2025-11-26 09:22:23,467 | INFO     | mean y: 2357799.493993994
[2025-11-26 10:23:14] 2025-11-26 09:22:23,467 | INFO     | intersect: -6512256049.217867
[2025-11-26 10:23:14] 2025-11-26 09:22:23,467 | INFO     | chi2: 1.0867458947821458
[2025-11-26 10:23:14] 2025-11-26 09:22:23,467 | INFO     | current chi2=1.0867458947821458 (change=0.8139221663147029 %)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,467 | INFO     | left removable region: 20
[2025-11-26 10:23:14] 2025-11-26 09:22:23,468 | INFO     | sum of square deviations: 83206360090.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,475 | INFO     | sum of deviations: 381649301547.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,475 | INFO     | mean x: 1764128582.0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,475 | INFO     | mean y: 2365877.1736434107
[2025-11-26 10:23:14] 2025-11-26 09:22:23,475 | INFO     | intersect: -8089304524.357553
[2025-11-26 10:23:14] 2025-11-26 09:22:23,476 | INFO     | chi2: 0.10345145332391288
[2025-11-26 10:23:14] 2025-11-26 09:22:23,476 | INFO     | current memory leak: 4.59 B/s (using 645 data points, chi2=0.10)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,476 | INFO     | could have reported an average CPU frequency of 3907 MHz (26 samples)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | ..............................
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . Timing measurements:
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . get job = 0 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . initial setup = 1 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . payload setup = 3 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . stage-in = 0 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . payload execution = 41216 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . stage-out = 1 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | . log creation = 0 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,477 | INFO     | ..............................
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | 
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | job summary report
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | --------------------------------------------------
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | PanDA job id: 6892537046
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | task id: 47493029
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | errors: (none)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | pilot state: finished 
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | transexitcode: 0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | exeerrorcode: 0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | exeerrordiag: 
[2025-11-26 10:23:14] 2025-11-26 09:22:23,545 | INFO     | exitcode: 0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | exitmsg: OK
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | cpuconsumptiontime: 161402 s
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | nevents: 1000
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | neventsw: 0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | pid: 1025315
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | pgrp: 1025315
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | corecount: 4
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | event service: False
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | sizes: {0: 2284084, 1: 2284339, 3: 2284601, 11: 2284629, 41223: 2328788, 41226: 2337796, 41228: 2337980, 41231: 2338226}
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | --------------------------------------------------
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | 
[2025-11-26 10:23:14] 2025-11-26 09:22:23,546 | INFO     | executing command: ls -lF /var/lib/boinc/boinc4/slots/0
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | job 6892537046 has completed (purged errors)
[2025-11-26 10:23:14] 2025-11-26 09:22:23,561 | INFO     | overall cleanup function is called
[2025-11-26 10:23:14] 2025-11-26 09:22:24,569 | INFO     | --- collectZombieJob: --- 10, [1025315]
[2025-11-26 10:23:14] 2025-11-26 09:22:24,569 | INFO     | zombie collector waiting for pid 1025315
[2025-11-26 10:23:14] 2025-11-26 09:22:24,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:23:14] 2025-11-26 09:22:24,569 | INFO     | collected zombie processes
[2025-11-26 10:23:14] 2025-11-26 09:22:24,569 | INFO     | will attempt to kill all subprocesses of pid=1025315
[2025-11-26 10:23:14] 2025-11-26 09:22:24,666 | INFO     | process IDs to be killed: [1025315] (in reverse order)
[2025-11-26 10:23:14] 2025-11-26 09:22:24,705 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:23:14] 2025-11-26 09:22:24,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:23:14] 2025-11-26 09:22:24,708 | INFO     | did not find any defunct processes belonging to 1025315
[2025-11-26 10:23:14] 2025-11-26 09:22:24,710 | INFO     | did not find any defunct processes belonging to 1025315
[2025-11-26 10:23:14] 2025-11-26 09:22:24,711 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:23:14] 2025-11-26 09:22:24,711 | INFO     | ready for new job
[2025-11-26 10:23:14] 2025-11-26 09:22:24,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:23:14] 2025-11-26 09:22:24,714 | INFO     | ***************************************
[2025-11-26 10:23:14] 2025-11-26 09:22:24,714 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:23:14] 2025-11-26 09:22:24,714 | INFO     | ***************************************
[2025-11-26 10:23:14] 2025-11-26 09:22:24,714 | INFO     | 
[2025-11-26 10:23:14] 2025-11-26 09:22:24,715 | INFO     | architecture information:
[2025-11-26 10:23:14] 2025-11-26 09:22:24,716 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:23:14] 2025-11-26 09:22:24,727 | INFO     | cat /etc/os-release:
[2025-11-26 10:23:14] NAME="CentOS Linux"
[2025-11-26 10:23:14] VERSION="7 (Core)"
[2025-11-26 10:23:14] ID="centos"
[2025-11-26 10:23:14] ID_LIKE="rhel fedora"
[2025-11-26 10:23:14] VERSION_ID="7"
[2025-11-26 10:23:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:23:14] ANSI_COLOR="0;31"
[2025-11-26 10:23:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:23:14] HOME_URL="https://www.centos.org/"
[2025-11-26 10:23:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:23:14] 
[2025-11-26 10:23:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:23:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:23:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:23:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:23:14] 
[2025-11-26 10:23:14] 2025-11-26 09:22:24,727 | INFO     | ***************************************
[2025-11-26 10:23:14] 2025-11-26 09:22:25,229 | INFO     | executing command: df -mP /var/lib/boinc/boinc4/slots/0
[2025-11-26 10:23:14] 2025-11-26 09:22:25,242 | INFO     | sufficient remaining disk space (215641751552 B)
[2025-11-26 10:23:14] 2025-11-26 09:22:25,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:23:14] 2025-11-26 09:22:25,242 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:23:14] 2025-11-26 09:22:25,243 | INFO     | update_server=False
[2025-11-26 10:23:14] 2025-11-26 09:22:25,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:23:14] 2025-11-26 09:22:25,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:23:14] 2025-11-26 09:22:25,243 | INFO     | aborting loop
[2025-11-26 10:23:14] 2025-11-26 09:22:25,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:23:14] 2025-11-26 09:22:25,722 | INFO     | all payload control threads have been joined
[2025-11-26 10:23:14] 2025-11-26 09:22:26,112 | INFO     | all job control threads have been joined
[2025-11-26 10:23:14] 2025-11-26 09:22:26,246 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:26,247 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:26,248 | INFO     | all data control threads have been joined
[2025-11-26 10:23:14] 2025-11-26 09:22:26,249 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:26,409 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:26,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:23:14] 2025-11-26 09:22:26,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:23:14] 2025-11-26 09:22:26,728 | INFO     | [payload] control thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,031 | INFO     | [job] validate thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,036 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,117 | INFO     | [job] control thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,228 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,242 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,253 | INFO     | [data] control thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,312 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:27,406 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:28,709 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:30,578 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:35,702 | INFO     | job.realtimelogging is not enabled
[2025-11-26 10:23:14] 2025-11-26 09:22:36,708 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:23:14] 2025-11-26 09:22:55,194 | INFO     | PID=1018767 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:23:14] 2025-11-26 09:22:55,194 | INFO     | .. there are 5 such processes running
[2025-11-26 10:23:14] 2025-11-26 09:22:55,195 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:23:14] 2025-11-26 09:22:55,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:23:14] 2025-11-26 09:22:55,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:23:14] 2025-11-26 09:23:07,322 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:23:14] 2025-11-26 09:23:09,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664821884736)>', '<ExcThread(monitor, started 140664306120448)>']
[2025-11-26 10:23:14] 2025-11-26 09:23:10,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:23:14] 2025-11-26 09:23:10,253 | INFO     | [monitor] control thread has ended
[2025-11-26 10:23:14] 2025-11-26 09:23:14,302 | INFO     | all workflow threads have been joined
[2025-11-26 10:23:14] 2025-11-26 09:23:14,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:23:14] 2025-11-26 09:23:14,303 | INFO     | traces error code: 0
[2025-11-26 10:23:14] 2025-11-26 09:23:14,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:23:14] 2025-11-26 09:23:14,376 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:23:14] 2025-11-26 09:23:14,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:23:14] 2025-11-26 09:23:14,380 [wrapper] pilotpid: 1018767
[2025-11-26 10:23:14] 2025-11-26 09:23:14,381 [wrapper] Pilot exit status: 0
[2025-11-26 10:23:14] 2025-11-26 09:23:14,387 [wrapper] pandaids: 6892537046
[2025-11-26 10:23:14] 2025-11-26 09:23:14,411 [wrapper] cleanup supervisor_pilot 1360510 1018768
[2025-11-26 10:23:14] 2025-11-26 09:23:14,413 [wrapper] Test setup, not cleaning
[2025-11-26 10:23:14] 2025-11-26 09:23:14,415 [wrapper] apfmon messages muted
[2025-11-26 10:23:14] 2025-11-26 09:23:14,416 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:23:14] 2025-11-26 09:23:14,418 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:23:14]  *** Error codes and diagnostics ***
[2025-11-26 10:23:14]     "exeErrorCode": 0,
[2025-11-26 10:23:14]     "exeErrorDiag": "",
[2025-11-26 10:23:14]     "pilotErrorCode": 0,
[2025-11-26 10:23:14]     "pilotErrorDiag": "",
[2025-11-26 10:23:14]  *** Listing of results directory ***
[2025-11-26 10:23:14] insgesamt 1331892
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc    576529 19. Nov 08:27 pilot3.tar.gz
[2025-11-26 10:23:14] -rwx------ 1 boinc boinc     36292 19. Nov 08:30 runpilot2-wrapper.sh
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc      5112 19. Nov 08:30 queuedata.json
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc       100 25. Nov 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:23:14] -rwxr-xr-x 1 boinc boinc      7986 25. Nov 22:54 run_atlas
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc       105 25. Nov 22:54 job.xml
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc      7021 25. Nov 22:54 init_data.xml
[2025-11-26 10:23:14] -rw-r--r-- 2 boinc boinc 411046640 25. Nov 22:54 EVNT.47493027._000201.pool.root.1
[2025-11-26 10:23:14] drwxrwx--x 2 boinc boinc      4096 25. Nov 22:54 shared
[2025-11-26 10:23:14] -rw-r--r-- 2 boinc boinc    590092 25. Nov 22:54 input.tar.gz
[2025-11-26 10:23:14] -rw-r--r-- 2 boinc boinc     15120 25. Nov 22:54 start_atlas.sh
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc         0 25. Nov 22:54 boinc_lockfile
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc      2773 25. Nov 22:54 pandaJob.out
[2025-11-26 10:23:14] -rw------- 1 boinc boinc    991893 25. Nov 22:54 agis_schedconf.cvmfs.json
[2025-11-26 10:23:14] drwx------ 5 boinc boinc      4096 25. Nov 22:54 pilot3
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc       533 26. Nov 10:17 boinc_task_state.xml
[2025-11-26 10:23:14] -rw------- 1 boinc boinc 934189774 26. Nov 10:21 HITS.47493029._001962.pool.root.1
[2025-11-26 10:23:14] -rw------- 1 boinc boinc      1025 26. Nov 10:22 memory_monitor_summary.json
[2025-11-26 10:23:14] -rw------- 1 boinc boinc   1516240 26. Nov 10:22 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:23:14] -rw------- 1 boinc boinc   1456029 26. Nov 10:22 log.47493029._001962.job.log.tgz.1
[2025-11-26 10:23:14] -rw------- 1 boinc boinc      8543 26. Nov 10:22 heartbeat.json
[2025-11-26 10:23:14] -rw------- 1 boinc boinc        95 26. Nov 10:22 pilot_heartbeat.json
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc      8192 26. Nov 10:23 boinc_mmap_file
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc        29 26. Nov 10:23 wrapper_checkpoint.txt
[2025-11-26 10:23:14] -rw------- 1 boinc boinc      4903 26. Nov 10:23 pilotlog.txt
[2025-11-26 10:23:14] -rw------- 1 boinc boinc   5894811 26. Nov 10:23 log.47493029._001962.job.log.1
[2025-11-26 10:23:14] -rw------- 1 boinc boinc       353 26. Nov 10:23 output.list
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc       620 26. Nov 10:23 runtime_log
[2025-11-26 10:23:14] -rw------- 1 boinc boinc   7372800 26. Nov 10:23 result.tar.gz
[2025-11-26 10:23:14] -rw------- 1 boinc boinc       651 26. Nov 10:23 SvTMDmAprf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxqGKDmeUIEAo.diag
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc      8757 26. Nov 10:23 runtime_log.err
[2025-11-26 10:23:14] -rw-r--r-- 1 boinc boinc     20993 26. Nov 10:23 stderr.txt
[2025-11-26 10:23:14] HITS file was successfully produced:
[2025-11-26 10:23:14] -rw------- 1 boinc boinc 934189774 26. Nov 10:21 shared/HITS.pool.root.1
[2025-11-26 10:23:14]  *** Contents of shared directory: ***
[2025-11-26 10:23:14] insgesamt 1321512
[2025-11-26 10:23:14] -rw-r--r-- 2 boinc boinc 411046640 25. Nov 22:54 ATLAS.root_0
[2025-11-26 10:23:14] -rw-r--r-- 2 boinc boinc    590092 25. Nov 22:54 input.tar.gz
[2025-11-26 10:23:14] -rw-r--r-- 2 boinc boinc     15120 25. Nov 22:54 start_atlas.sh
[2025-11-26 10:23:14] -rw------- 1 boinc boinc 934189774 26. Nov 10:21 HITS.pool.root.1
[2025-11-26 10:23:14] -rw------- 1 boinc boinc   7372800 26. Nov 10:23 result.tar.gz
10:23:16 (1014996): run_atlas exited; CPU time 161574.605904
10:23:16 (1014996): called boinc_finish(0)

</stderr_txt>
]]>

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