Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:47:16 (22157): wrapper (7.7.26015): starting
07:47:16 (22157): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 07:47:16] Arguments: --nthreads 8
[2025-11-19 07:47:16] Threads: 8
[2025-11-19 07:47:16] Checking for CVMFS
[2025-11-19 07:47:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 07:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 07:47:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 07:47:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 07:47:17] 2.11.2.0 2913 63239 84732 153045 0 81 12126057 20275201 1 130560 0 18972220 99.895 3189384 33006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 07:47:17] CVMFS is ok
[2025-11-19 07:47:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 07:47:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 07:47:17] Further information can be found at the LHC@home message board.
[2025-11-19 07:47:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 07:47:17] Checking for apptainer binary...
[2025-11-19 07:47:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 07:47:17] Running /usr/bin/apptainer --version
[2025-11-19 07:47:17] apptainer version 1.3.2-1.el7
[2025-11-19 07:47:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 07:47:18] c-115-15.aglt2.org
[2025-11-19 07:47:18] apptainer works
[2025-11-19 07:47:18] Set ATHENA_PROC_NUMBER=8
[2025-11-19 07:47:18] Set ATHENA_CORE_NUMBER=8
[2025-11-19 07:47:18] Starting ATLAS job with PandaID=6892537928
[2025-11-19 07:47:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 19:19:56]  *** The last 200 lines of the pilot log: ***
[2025-11-19 19:19:56] 2025-11-20 00:19:22,483 | INFO     | PID=25830 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-19 19:19:56] 2025-11-20 00:19:23,483 | INFO     | time since job start (41508s) is within the limit (172800.0s)
[2025-11-19 19:19:56] 2025-11-20 00:19:23,528 | INFO     | monitor loop #3062: job 0:6892537928 is in state 'finished'
[2025-11-19 19:19:56] 2025-11-20 00:19:23,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,646 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-19 19:19:56] 2025-11-20 00:19:24,650 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-19 19:19:56] 2025-11-20 00:19:24,652 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892537928/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,653 | INFO     | extracted standard info from prmon json
[2025-11-19 19:19:56] 2025-11-20 00:19:24,653 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 19:19:56] 2025-11-20 00:19:24,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 19:19:56] 2025-11-20 00:19:24,665 | INFO     | fitting pss+swap vs Time
[2025-11-19 19:19:56] 2025-11-20 00:19:24,666 | INFO     | sum of square deviations: 97499879892.22192
[2025-11-19 19:19:56] 2025-11-20 00:19:24,674 | INFO     | sum of deviations: 733279177957.4822
[2025-11-19 19:19:56] 2025-11-20 00:19:24,675 | INFO     | mean x: 1763577197.0338235
[2025-11-19 19:19:56] 2025-11-20 00:19:24,675 | INFO     | mean y: 2952450.1529411767
[2025-11-19 19:19:56] 2025-11-20 00:19:24,675 | INFO     | intersect: -13260596579.18989
[2025-11-19 19:19:56] 2025-11-20 00:19:24,676 | INFO     | chi2: 5.769958478395716
[2025-11-19 19:19:56] 2025-11-20 00:19:24,676 | INFO     | sum of square deviations: 95365029645.78676
[2025-11-19 19:19:56] 2025-11-20 00:19:24,685 | INFO     | sum of deviations: 953242616169.3016
[2025-11-19 19:19:56] 2025-11-20 00:19:24,685 | INFO     | mean x: 1763577044.5377777
[2025-11-19 19:19:56] 2025-11-20 00:19:24,685 | INFO     | mean y: 2968157.3214814817
[2025-11-19 19:19:56] 2025-11-20 00:19:24,685 | INFO     | intersect: -17625263092.597584
[2025-11-19 19:19:56] 2025-11-20 00:19:24,686 | INFO     | chi2: 2.8787054860871137
[2025-11-19 19:19:56] 2025-11-20 00:19:24,686 | INFO     | current chi2=2.8787054860871137 (change=50.108731338955636 %)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,687 | INFO     | sum of square deviations: 93261575336.82967
[2025-11-19 19:19:56] 2025-11-20 00:19:24,695 | INFO     | sum of deviations: 1021326689884.3431
[2025-11-19 19:19:56] 2025-11-20 00:19:24,695 | INFO     | mean x: 1763576892.041791
[2025-11-19 19:19:56] 2025-11-20 00:19:24,695 | INFO     | mean y: 2973084.880597015
[2025-11-19 19:19:56] 2025-11-20 00:19:24,695 | INFO     | intersect: -19310320122.96272
[2025-11-19 19:19:56] 2025-11-20 00:19:24,696 | INFO     | chi2: 2.4691874558891325
[2025-11-19 19:19:56] 2025-11-20 00:19:24,696 | INFO     | current chi2=2.4691874558891325 (change=14.22577030464549 %)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,696 | INFO     | right removable region: 669
[2025-11-19 19:19:56] 2025-11-20 00:19:24,697 | INFO     | sum of square deviations: 95364808215.78665
[2025-11-19 19:19:56] 2025-11-20 00:19:24,705 | INFO     | sum of deviations: 541601606331.27057
[2025-11-19 19:19:56] 2025-11-20 00:19:24,706 | INFO     | mean x: 1763577349.5377777
[2025-11-19 19:19:56] 2025-11-20 00:19:24,706 | INFO     | mean y: 2966115.0874074074
[2025-11-19 19:19:56] 2025-11-20 00:19:24,706 | INFO     | intersect: -10012849396.624477
[2025-11-19 19:19:56] 2025-11-20 00:19:24,707 | INFO     | chi2: 3.46163116845492
[2025-11-19 19:19:56] 2025-11-20 00:19:24,707 | INFO     | current chi2=3.46163116845492 (change=40.005960503594565 %)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,707 | INFO     | sum of square deviations: 93261132476.82967
[2025-11-19 19:19:56] 2025-11-20 00:19:24,716 | INFO     | sum of deviations: 503386108800.44775
[2025-11-19 19:19:56] 2025-11-20 00:19:24,716 | INFO     | mean x: 1763577502.041791
[2025-11-19 19:19:56] 2025-11-20 00:19:24,716 | INFO     | mean y: 2968883.6268656715
[2025-11-19 19:19:56] 2025-11-20 00:19:24,716 | INFO     | intersect: -9516113640.28942
[2025-11-19 19:19:56] 2025-11-20 00:19:24,717 | INFO     | chi2: 3.4270956811395297
[2025-11-19 19:19:56] 2025-11-20 00:19:24,717 | INFO     | current chi2=3.4270956811395297 (change=0.9976651363121672 %)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,717 | INFO     | left removable region: 20
[2025-11-19 19:19:56] 2025-11-20 00:19:24,718 | INFO     | sum of square deviations: 84763978718.72194
[2025-11-19 19:19:56] 2025-11-20 00:19:24,726 | INFO     | sum of deviations: 743546683151.4204
[2025-11-19 19:19:56] 2025-11-20 00:19:24,726 | INFO     | mean x: 1763577471.5485363
[2025-11-19 19:19:56] 2025-11-20 00:19:24,726 | INFO     | mean y: 2993297.653312789
[2025-11-19 19:19:56] 2025-11-20 00:19:24,726 | INFO     | intersect: -15467047151.979963
[2025-11-19 19:19:56] 2025-11-20 00:19:24,727 | INFO     | chi2: 0.0972534805760736
[2025-11-19 19:19:56] 2025-11-20 00:19:24,727 | INFO     | current memory leak: 8.77 B/s (using 649 data points, chi2=0.10)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,727 | INFO     | could have reported an average CPU frequency of 2393 MHz (26 samples)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | ..............................
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . Timing measurements:
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . get job = 0 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . initial setup = 2 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . payload setup = 8 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . stage-in = 0 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . payload execution = 41465 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . stage-out = 3 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,728 | INFO     | . log creation = 0 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,729 | INFO     | ..............................
[2025-11-19 19:19:56] 2025-11-20 00:19:24,814 | INFO     | 
[2025-11-19 19:19:56] 2025-11-20 00:19:24,814 | INFO     | job summary report
[2025-11-19 19:19:56] 2025-11-20 00:19:24,814 | INFO     | --------------------------------------------------
[2025-11-19 19:19:56] 2025-11-20 00:19:24,814 | INFO     | PanDA job id: 6892537928
[2025-11-19 19:19:56] 2025-11-20 00:19:24,814 | INFO     | task id: 47493029
[2025-11-19 19:19:56] 2025-11-20 00:19:24,815 | INFO     | errors: (none)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 19:19:56] 2025-11-20 00:19:24,815 | INFO     | pilot state: finished 
[2025-11-19 19:19:56] 2025-11-20 00:19:24,815 | INFO     | transexitcode: 0
[2025-11-19 19:19:56] 2025-11-20 00:19:24,815 | INFO     | exeerrorcode: 0
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | exeerrordiag: 
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | exitcode: 0
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | exitmsg: OK
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | cpuconsumptiontime: 320123 s
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | nevents: 1000
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | neventsw: 0
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | pid: 32372
[2025-11-19 19:19:56] 2025-11-20 00:19:24,816 | INFO     | pgrp: 32372
[2025-11-19 19:19:56] 2025-11-20 00:19:24,817 | INFO     | corecount: 8
[2025-11-19 19:19:56] 2025-11-20 00:19:24,817 | INFO     | event service: False
[2025-11-19 19:19:56] 2025-11-20 00:19:24,817 | INFO     | sizes: {0: 2297194, 1: 2297194, 6: 2297484, 11: 2297512, 41477: 2341652, 41480: 2350646, 41483: 2350830, 41492: 2351076}
[2025-11-19 19:19:56] 2025-11-20 00:19:24,817 | INFO     | --------------------------------------------------
[2025-11-19 19:19:56] 2025-11-20 00:19:24,817 | INFO     | 
[2025-11-19 19:19:56] 2025-11-20 00:19:24,817 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-19 19:19:56] 2025-11-20 00:19:24,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,850 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,850 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 19:19:56] 2025-11-20 00:19:24,851 | INFO     | job 6892537928 has completed (purged errors)
[2025-11-19 19:19:56] 2025-11-20 00:19:24,851 | INFO     | overall cleanup function is called
[2025-11-19 19:19:56] 2025-11-20 00:19:25,867 | INFO     | --- collectZombieJob: --- 10, [32372]
[2025-11-19 19:19:56] 2025-11-20 00:19:25,867 | INFO     | zombie collector waiting for pid 32372
[2025-11-19 19:19:56] 2025-11-20 00:19:25,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 19:19:56] 2025-11-20 00:19:25,867 | INFO     | collected zombie processes
[2025-11-19 19:19:56] 2025-11-20 00:19:25,867 | INFO     | will attempt to kill all subprocesses of pid=32372
[2025-11-19 19:19:56] 2025-11-20 00:19:25,953 | INFO     | process IDs to be killed: [32372] (in reverse order)
[2025-11-19 19:19:56] 2025-11-20 00:19:26,010 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 19:19:56] 2025-11-20 00:19:26,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 19:19:56] 2025-11-20 00:19:26,015 | INFO     | did not find any defunct processes belonging to 32372
[2025-11-19 19:19:56] 2025-11-20 00:19:26,018 | INFO     | did not find any defunct processes belonging to 32372
[2025-11-19 19:19:56] 2025-11-20 00:19:26,020 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 19:19:56] 2025-11-20 00:19:26,021 | INFO     | ready for new job
[2025-11-19 19:19:56] 2025-11-20 00:19:26,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 19:19:56] 2025-11-20 00:19:26,024 | INFO     | ***************************************
[2025-11-19 19:19:56] 2025-11-20 00:19:26,024 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 19:19:56] 2025-11-20 00:19:26,024 | INFO     | ***************************************
[2025-11-19 19:19:56] 2025-11-20 00:19:26,024 | INFO     | 
[2025-11-19 19:19:56] 2025-11-20 00:19:26,025 | INFO     | architecture information:
[2025-11-19 19:19:56] 2025-11-20 00:19:26,025 | INFO     | executing command: cat /etc/os-release
[2025-11-19 19:19:56] 2025-11-20 00:19:26,043 | INFO     | cat /etc/os-release:
[2025-11-19 19:19:56] NAME="CentOS Linux"
[2025-11-19 19:19:56] VERSION="7 (Core)"
[2025-11-19 19:19:56] ID="centos"
[2025-11-19 19:19:56] ID_LIKE="rhel fedora"
[2025-11-19 19:19:56] VERSION_ID="7"
[2025-11-19 19:19:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 19:19:56] ANSI_COLOR="0;31"
[2025-11-19 19:19:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 19:19:56] HOME_URL="https://www.centos.org/"
[2025-11-19 19:19:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 19:19:56] 
[2025-11-19 19:19:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 19:19:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 19:19:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 19:19:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 19:19:56] 
[2025-11-19 19:19:56] 2025-11-20 00:19:26,044 | INFO     | ***************************************
[2025-11-19 19:19:56] 2025-11-20 00:19:26,547 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-19 19:19:56] 2025-11-20 00:19:26,567 | INFO     | sufficient remaining disk space (17458790400 B)
[2025-11-19 19:19:56] 2025-11-20 00:19:26,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 19:19:56] 2025-11-20 00:19:26,568 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 19:19:56] 2025-11-20 00:19:26,568 | INFO     | update_server=False
[2025-11-19 19:19:56] 2025-11-20 00:19:26,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 19:19:56] 2025-11-20 00:19:26,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 19:19:56] 2025-11-20 00:19:26,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 19:19:56] 2025-11-20 00:19:26,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 19:19:56] 2025-11-20 00:19:26,785 | INFO     | all data control threads have been joined
[2025-11-19 19:19:56] 2025-11-20 00:19:27,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 19:19:56] 2025-11-20 00:19:27,037 | INFO     | aborting loop
[2025-11-19 19:19:56] 2025-11-20 00:19:27,573 | INFO     | [job] queue monitor thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:27,574 | INFO     | [job] retrieve thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:27,600 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:27,740 | INFO     | all job control threads have been joined
[2025-11-19 19:19:56] 2025-11-20 00:19:27,786 | INFO     | [data] control thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,011 | INFO     | all payload control threads have been joined
[2025-11-19 19:19:56] 2025-11-20 00:19:28,013 | INFO     | [job] validate thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,042 | INFO     | [job] job monitor thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,345 | INFO     | [data] copytool_in thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,507 | INFO     | [payload] validate_post thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,575 | INFO     | [data] copytool_out thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,744 | INFO     | [job] control thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,803 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,886 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:28,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:29,014 | INFO     | [payload] control thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:29,123 | INFO     | [payload] failed_post thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:30,741 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 19:19:56] 2025-11-20 00:19:43,842 | INFO     | [monitor] cgroup control has ended
[2025-11-19 19:19:56] 2025-11-20 00:19:45,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796575188800)>', '<ExcThread(monitor, started 139795481229056)>']
[2025-11-19 19:19:56] 2025-11-20 00:19:50,618 | INFO     | all workflow threads have been joined
[2025-11-19 19:19:56] 2025-11-20 00:19:50,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 19:19:56] 2025-11-20 00:19:50,619 | INFO     | traces error code: 0
[2025-11-19 19:19:56] 2025-11-20 00:19:50,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 19:19:56] 2025-11-20 00:19:56,606 | INFO     | PID=25830 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-19 19:19:56] 2025-11-20 00:19:56,607 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 19:19:56] 2025-11-20 00:19:56,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 19:19:56] 2025-11-20 00:19:56,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 19:19:56] 2025-11-20 00:19:56,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 19:19:56] 2025-11-20 00:19:56,607 | INFO     | [monitor] control thread has ended
[2025-11-19 19:19:56] 2025-11-20 00:19:56,723 [wrapper] ==== pilot stdout END ====
[2025-11-19 19:19:56] 2025-11-20 00:19:56,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 19:19:56] 2025-11-20 00:19:56,732 [wrapper] pilotpid: 25830
[2025-11-19 19:19:56] 2025-11-20 00:19:56,737 [wrapper] Pilot exit status: 0
[2025-11-19 19:19:56] 2025-11-20 00:19:56,755 [wrapper] pandaids: 6892537928
[2025-11-19 19:19:56] 2025-11-20 00:19:56,794 [wrapper] cleanup supervisor_pilot 31762 25831
[2025-11-19 19:19:56] 2025-11-20 00:19:56,799 [wrapper] Test setup, not cleaning
[2025-11-19 19:19:56] 2025-11-20 00:19:56,804 [wrapper] apfmon messages muted
[2025-11-19 19:19:56] 2025-11-20 00:19:56,808 [wrapper] ==== wrapper stdout END ====
[2025-11-19 19:19:56] 2025-11-20 00:19:56,813 [wrapper] ==== wrapper stderr END ====
[2025-11-19 19:19:56]  *** Error codes and diagnostics ***
[2025-11-19 19:19:56]     "exeErrorCode": 0,
[2025-11-19 19:19:56]     "exeErrorDiag": "",
[2025-11-19 19:19:56]     "pilotErrorCode": 0,
[2025-11-19 19:19:56]     "pilotErrorDiag": "",
[2025-11-19 19:19:56]  *** Listing of results directory ***
[2025-11-19 19:19:56] total 1325140
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:27 queuedata.json
[2025-11-19 19:19:56] -rwx------ 1 boincer umatlas     36292 Nov 19 02:28 runpilot2-wrapper.sh
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas       100 Nov 19 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 19:19:56] -rwxr-xr-x 1 boincer umatlas      7986 Nov 19 07:47 run_atlas
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas       105 Nov 19 07:47 job.xml
[2025-11-19 19:19:56] -rw-r--r-- 2 boincer umatlas 409366460 Nov 19 07:47 EVNT.47493027._000224.pool.root.1
[2025-11-19 19:19:56] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 07:47 start_atlas.sh
[2025-11-19 19:19:56] drwxrwx--x 2 boincer umatlas      4096 Nov 19 07:47 shared
[2025-11-19 19:19:56] -rw-r--r-- 2 boincer umatlas    611280 Nov 19 07:47 input.tar.gz
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas         0 Nov 19 07:47 boinc_lockfile
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas      2770 Nov 19 07:47 pandaJob.out
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas    989442 Nov 19 07:47 agis_schedconf.cvmfs.json
[2025-11-19 19:19:56] drwx------ 7 boincer umatlas      4096 Nov 19 07:47 pilot3
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas       533 Nov 19 19:09 boinc_task_state.xml
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas      5912 Nov 19 19:12 init_data.xml
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas 928295227 Nov 19 19:18 HITS.47493029._002191.pool.root.1
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas      1065 Nov 19 19:19 memory_monitor_summary.json
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas   1525063 Nov 19 19:19 agis_ddmendpoints.agis.ALL.json
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas        95 Nov 19 19:19 pilot_heartbeat.json
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas   1936015 Nov 19 19:19 log.47493029._002191.job.log.tgz.1
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas      8669 Nov 19 19:19 heartbeat.json
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas      8192 Nov 19 19:19 boinc_mmap_file
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas        29 Nov 19 19:19 wrapper_checkpoint.txt
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas       745 Nov 19 19:19 pilotlog.txt
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas   5728424 Nov 19 19:19 log.47493029._002191.job.log.1
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas       353 Nov 19 19:19 output.list
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas       620 Nov 19 19:19 runtime_log
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas   7680000 Nov 19 19:19 result.tar.gz
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas      8704 Nov 19 19:19 runtime_log.err
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas       668 Nov 19 19:19 BOfNDmBnrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA1FKDmTsJMDo.diag
[2025-11-19 19:19:56] -rw-r--r-- 1 boincer umatlas     21413 Nov 19 19:19 stderr.txt
[2025-11-19 19:19:56] HITS file was successfully produced:
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas 928295227 Nov 19 19:18 shared/HITS.pool.root.1
[2025-11-19 19:19:56]  *** Contents of shared directory: ***
[2025-11-19 19:19:56] total 1314432
[2025-11-19 19:19:56] -rw-r--r-- 2 boincer umatlas 409366460 Nov 19 07:47 ATLAS.root_0
[2025-11-19 19:19:56] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 07:47 start_atlas.sh
[2025-11-19 19:19:56] -rw-r--r-- 2 boincer umatlas    611280 Nov 19 07:47 input.tar.gz
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas 928295227 Nov 19 19:18 HITS.pool.root.1
[2025-11-19 19:19:56] -rw------- 1 boincer umatlas   7680000 Nov 19 19:19 result.tar.gz
19:19:58 (22157): run_atlas exited; CPU time 316818.419779
19:19:58 (22157): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN