Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:47 (1813111): wrapper (7.7.26015): starting
14:40:47 (1813111): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 14:40:47] Arguments: --nthreads 4
[2025-11-23 14:40:47] Threads: 4
[2025-11-23 14:40:47] Checking for CVMFS
[2025-11-23 14:40:47] No cvmfs_config command found, will try listing directly
[2025-11-23 14:40:47] CVMFS is ok
[2025-11-23 14:40:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 14:40:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 14:40:47] Further information can be found at the LHC@home message board.
[2025-11-23 14:40:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:40:47] Checking for apptainer binary...
[2025-11-23 14:40:47] which: no apptainer in ((null))
[2025-11-23 14:40:47] apptainer is not installed, using version from CVMFS
[2025-11-23 14:40:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:40:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-11-23 14:40:47] apptainer works
[2025-11-23 14:40:47] Set ATHENA_PROC_NUMBER=4
[2025-11-23 14:40:47] Set ATHENA_CORE_NUMBER=4
[2025-11-23 14:40:48] Starting ATLAS job with PandaID=6892528451
[2025-11-23 14:40:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 06:46:41]  *** The last 200 lines of the pilot log: ***
[2025-11-24 06:46:41] 2025-11-24 05:38:10,682 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 06:46:41] 2025-11-24 05:38:10,707 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2685.5159140624987
[2025-11-24 06:46:41] 2025-11-24 05:38:10,732 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6892528451/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,733 | INFO     | extracted standard info from prmon json
[2025-11-24 06:46:41] 2025-11-24 05:38:10,733 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 06:46:41] 2025-11-24 05:38:10,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 06:46:41] 2025-11-24 05:38:10,749 | INFO     | fitting pss+swap vs Time
[2025-11-24 06:46:41] 2025-11-24 05:38:10,751 | INFO     | sum of square deviations: 257547499993.89792
[2025-11-24 06:46:41] 2025-11-24 05:38:10,771 | INFO     | sum of deviations: 793080751279.0034
[2025-11-24 06:46:41] 2025-11-24 05:38:10,771 | INFO     | mean x: 1763934004.5574467
[2025-11-24 06:46:41] 2025-11-24 05:38:10,771 | INFO     | mean y: 2275377.435106383
[2025-11-24 06:46:41] 2025-11-24 05:38:10,771 | INFO     | intersect: -5429507519.211711
[2025-11-24 06:46:41] 2025-11-24 05:38:10,773 | INFO     | chi2: 5.042129487624432
[2025-11-24 06:46:41] 2025-11-24 05:38:10,774 | INFO     | sum of square deviations: 253459495628.8813
[2025-11-24 06:46:41] 2025-11-24 05:38:10,794 | INFO     | sum of deviations: 1004761729191.9288
[2025-11-24 06:46:41] 2025-11-24 05:38:10,794 | INFO     | mean x: 1763933852.057754
[2025-11-24 06:46:41] 2025-11-24 05:38:10,794 | INFO     | mean y: 2283267.5754010696
[2025-11-24 06:46:41] 2025-11-24 05:38:10,794 | INFO     | intersect: -6990286582.594277
[2025-11-24 06:46:41] 2025-11-24 05:38:10,795 | INFO     | chi2: 2.556293280756709
[2025-11-24 06:46:41] 2025-11-24 05:38:10,795 | INFO     | current chi2=2.556293280756709 (change=49.30131629838227 %)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,796 | INFO     | sum of square deviations: 249414980451.36517
[2025-11-24 06:46:41] 2025-11-24 05:38:10,816 | INFO     | sum of deviations: 1060207742209.8408
[2025-11-24 06:46:41] 2025-11-24 05:38:10,816 | INFO     | mean x: 1763933699.5580645
[2025-11-24 06:46:41] 2025-11-24 05:38:10,816 | INFO     | mean y: 2285356.734408602
[2025-11-24 06:46:41] 2025-11-24 05:38:10,816 | INFO     | intersect: -7495805422.06296
[2025-11-24 06:46:41] 2025-11-24 05:38:10,817 | INFO     | chi2: 2.3312153310202857
[2025-11-24 06:46:41] 2025-11-24 05:38:10,818 | INFO     | current chi2=2.3312153310202857 (change=8.804856290581663 %)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,818 | INFO     | right removable region: 929
[2025-11-24 06:46:41] 2025-11-24 05:38:10,819 | INFO     | sum of square deviations: 253459519783.99637
[2025-11-24 06:46:41] 2025-11-24 05:38:10,839 | INFO     | sum of deviations: 598626181975.061
[2025-11-24 06:46:41] 2025-11-24 05:38:10,839 | INFO     | mean x: 1763934157.0566845
[2025-11-24 06:46:41] 2025-11-24 05:38:10,839 | INFO     | mean y: 2282619.942245989
[2025-11-24 06:46:41] 2025-11-24 05:38:10,839 | INFO     | intersect: -4163815266.592586
[2025-11-24 06:46:41] 2025-11-24 05:38:10,840 | INFO     | chi2: 2.8236793596137018
[2025-11-24 06:46:41] 2025-11-24 05:38:10,841 | INFO     | current chi2=2.8236793596137018 (change=43.99827758203685 %)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,842 | INFO     | sum of square deviations: 249414971971.47992
[2025-11-24 06:46:41] 2025-11-24 05:38:10,861 | INFO     | sum of deviations: 569281703495.9452
[2025-11-24 06:46:41] 2025-11-24 05:38:10,861 | INFO     | mean x: 1763934309.5569892
[2025-11-24 06:46:41] 2025-11-24 05:38:10,861 | INFO     | mean y: 2283725.7086021504
[2025-11-24 06:46:41] 2025-11-24 05:38:10,861 | INFO     | intersect: -4023839969.5215793
[2025-11-24 06:46:41] 2025-11-24 05:38:10,862 | INFO     | chi2: 2.8055531022746374
[2025-11-24 06:46:41] 2025-11-24 05:38:10,862 | INFO     | current chi2=2.8055531022746374 (change=0.6419375230176333 %)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,862 | INFO     | left removable region: 20
[2025-11-24 06:46:41] 2025-11-24 05:38:10,864 | INFO     | sum of square deviations: 232897820462.35657
[2025-11-24 06:46:41] 2025-11-24 05:38:10,883 | INFO     | sum of deviations: 802479244046.5095
[2025-11-24 06:46:41] 2025-11-24 05:38:10,883 | INFO     | mean x: 1763934279.0539055
[2025-11-24 06:46:41] 2025-11-24 05:38:10,883 | INFO     | mean y: 2295421.3773377337
[2025-11-24 06:46:41] 2025-11-24 05:38:10,883 | INFO     | intersect: -6075565865.571436
[2025-11-24 06:46:41] 2025-11-24 05:38:10,884 | INFO     | chi2: 0.0694044658563971
[2025-11-24 06:46:41] 2025-11-24 05:38:10,884 | INFO     | current memory leak: 3.45 B/s (using 909 data points, chi2=0.07)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,885 | INFO     | monitor loop #3837: job 0:6892528451 is in state 'finished'
[2025-11-24 06:46:41] 2025-11-24 05:38:10,886 | INFO     | could have reported an average CPU frequency of 2677 MHz (35 samples)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,886 | INFO     | ..............................
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . Timing measurements:
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . get job = 0 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . initial setup = 1 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . payload setup = 18 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . stage-in = 0 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . payload execution = 57335 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . stage-out = 2 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | . log creation = 0 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,887 | INFO     | ..............................
[2025-11-24 06:46:41] 2025-11-24 05:38:10,986 | INFO     | 
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | job summary report
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | --------------------------------------------------
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | PanDA job id: 6892528451
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | task id: 47493029
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | errors: (none)
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | pilot state: finished 
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | transexitcode: 0
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | exeerrorcode: 0
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | exeerrordiag: 
[2025-11-24 06:46:41] 2025-11-24 05:38:10,987 | INFO     | exitcode: 0
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | exitmsg: OK
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | cpuconsumptiontime: 222720 s
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | nevents: 1000
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | neventsw: 0
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | pid: 1838994
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | pgrp: 1838994
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | corecount: 4
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | event service: False
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | sizes: {0: 2298637, 1: 2298836, 12: 2298836, 16: 2299126, 22: 2299154, 57357: 2351976, 57358: 2352103, 57360: 2361177, 57363: 2361233, 57371: 2361479}
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | --------------------------------------------------
[2025-11-24 06:46:41] 2025-11-24 05:38:10,988 | INFO     | 
[2025-11-24 06:46:41] 2025-11-24 05:38:10,989 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 06:46:41] 2025-11-24 05:38:11,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 06:46:41] 2025-11-24 05:38:11,021 | INFO     | job 6892528451 has completed (purged errors)
[2025-11-24 06:46:41] 2025-11-24 05:38:11,021 | INFO     | overall cleanup function is called
[2025-11-24 06:46:41] 2025-11-24 05:38:12,037 | INFO     | --- collectZombieJob: --- 10, [1838994]
[2025-11-24 06:46:41] 2025-11-24 05:38:12,038 | INFO     | zombie collector waiting for pid 1838994
[2025-11-24 06:46:41] 2025-11-24 05:38:12,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 06:46:41] 2025-11-24 05:38:12,038 | INFO     | collected zombie processes
[2025-11-24 06:46:41] 2025-11-24 05:38:12,038 | INFO     | will attempt to kill all subprocesses of pid=1838994
[2025-11-24 06:46:41] 2025-11-24 05:38:12,835 | INFO     | process IDs to be killed: [1838994] (in reverse order)
[2025-11-24 06:46:41] 2025-11-24 05:38:13,112 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 06:46:41] 2025-11-24 05:38:13,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 06:46:41] 2025-11-24 05:38:13,144 | INFO     | did not find any defunct processes belonging to 1838994
[2025-11-24 06:46:41] 2025-11-24 05:38:13,170 | INFO     | did not find any defunct processes belonging to 1838994
[2025-11-24 06:46:41] 2025-11-24 05:38:13,172 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 06:46:41] 2025-11-24 05:38:13,173 | INFO     | ready for new job
[2025-11-24 06:46:41] 2025-11-24 05:38:13,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 06:46:41] 2025-11-24 05:38:13,180 | INFO     | ***************************************
[2025-11-24 06:46:41] 2025-11-24 05:38:13,180 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 06:46:41] 2025-11-24 05:38:13,180 | INFO     | ***************************************
[2025-11-24 06:46:41] 2025-11-24 05:38:13,180 | INFO     | 
[2025-11-24 06:46:41] 2025-11-24 05:38:13,189 | INFO     | architecture information:
[2025-11-24 06:46:41] 2025-11-24 05:38:13,189 | INFO     | executing command: cat /etc/os-release
[2025-11-24 06:46:41] 2025-11-24 05:38:13,210 | INFO     | cat /etc/os-release:
[2025-11-24 06:46:41] NAME="CentOS Linux"
[2025-11-24 06:46:41] VERSION="7 (Core)"
[2025-11-24 06:46:41] ID="centos"
[2025-11-24 06:46:41] ID_LIKE="rhel fedora"
[2025-11-24 06:46:41] VERSION_ID="7"
[2025-11-24 06:46:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 06:46:41] ANSI_COLOR="0;31"
[2025-11-24 06:46:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 06:46:41] HOME_URL="https://www.centos.org/"
[2025-11-24 06:46:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 06:46:41] 
[2025-11-24 06:46:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 06:46:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 06:46:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 06:46:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 06:46:41] 
[2025-11-24 06:46:41] 2025-11-24 05:38:13,211 | INFO     | ***************************************
[2025-11-24 06:46:41] 2025-11-24 05:38:13,714 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-11-24 06:46:41] 2025-11-24 05:38:13,736 | INFO     | sufficient remaining disk space (3302563512320 B)
[2025-11-24 06:46:41] 2025-11-24 05:38:13,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 06:46:41] 2025-11-24 05:38:13,737 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 06:46:41] 2025-11-24 05:38:13,737 | INFO     | update_server=False
[2025-11-24 06:46:41] 2025-11-24 05:38:13,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 06:46:41] 2025-11-24 05:38:13,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 06:46:41] 2025-11-24 05:38:13,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 06:46:41] 2025-11-24 05:38:14,000 | INFO     | all data control threads have been joined
[2025-11-24 06:46:41] 2025-11-24 05:38:14,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:46:41] 2025-11-24 05:38:14,395 | INFO     | aborting loop
[2025-11-24 06:46:41] 2025-11-24 05:38:14,480 | INFO     | all job control threads have been joined
[2025-11-24 06:46:41] 2025-11-24 05:38:14,725 | INFO     | all payload control threads have been joined
[2025-11-24 06:46:41] 2025-11-24 05:38:14,742 | INFO     | [job] retrieve thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:14,766 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:14,849 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:14,946 | INFO     | [payload] failed_post thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,005 | INFO     | [data] control thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,290 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,400 | INFO     | [job] job monitor thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,486 | INFO     | [job] control thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,649 | INFO     | [job] validate thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,674 | INFO     | [data] copytool_in thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,731 | INFO     | [payload] control thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,744 | INFO     | [data] copytool_out thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,968 | INFO     | [payload] validate_post thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:15,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 06:46:41] 2025-11-24 05:38:17,001 | INFO     | [job] queue monitor thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:17,744 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:24,554 | INFO     | job.realtimelogging is not enabled
[2025-11-24 06:46:41] 2025-11-24 05:38:25,559 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 06:46:41] 2025-11-24 05:38:43,307 | INFO     | PID=1823165 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 06:46:41] 2025-11-24 05:38:43,307 | INFO     | .. there are 10 such processes running
[2025-11-24 06:46:41] 2025-11-24 05:38:43,308 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 06:46:41] 2025-11-24 05:38:43,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 06:46:41] 2025-11-24 05:38:43,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 06:46:41] 2025-11-24 05:38:56,230 | INFO     | [monitor] cgroup control has ended
[2025-11-24 06:46:41] 2025-11-24 05:38:58,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22825492096832)>', '<ExcThread(monitor, started 22825255536384)>']
[2025-11-24 06:46:41] 2025-11-24 05:38:58,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 06:46:41] 2025-11-24 05:38:58,371 | INFO     | [monitor] control thread has ended
[2025-11-24 06:46:41] 2025-11-24 05:39:03,180 | INFO     | all workflow threads have been joined
[2025-11-24 06:46:41] 2025-11-24 05:39:03,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 06:46:41] 2025-11-24 05:39:03,181 | INFO     | traces error code: 0
[2025-11-24 06:46:41] 2025-11-24 05:39:03,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 06:46:41] 2025-11-24 05:39:03,322 [wrapper] ==== pilot stdout END ====
[2025-11-24 06:46:41] 2025-11-24 05:39:03,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 06:46:41] 2025-11-24 05:39:03,332 [wrapper] pilotpid: 1823165
[2025-11-24 06:46:41] 2025-11-24 05:39:03,336 [wrapper] Pilot exit status: 0
[2025-11-24 06:46:41] 2025-11-24 05:39:03,354 [wrapper] pandaids: 6892528451
[2025-11-24 06:46:41] 2025-11-24 05:39:03,535 [wrapper] cleanup supervisor_pilot 3400173 1823166
[2025-11-24 06:46:41] 2025-11-24 05:39:03,539 [wrapper] Test setup, not cleaning
[2025-11-24 06:46:41] 2025-11-24 05:39:03,543 [wrapper] apfmon messages muted
[2025-11-24 06:46:41] 2025-11-24 05:39:03,547 [wrapper] ==== wrapper stdout END ====
[2025-11-24 06:46:41] 2025-11-24 05:39:03,551 [wrapper] ==== wrapper stderr END ====
[2025-11-24 06:46:41]  *** Error codes and diagnostics ***
[2025-11-24 06:46:41]     "exeErrorCode": 0,
[2025-11-24 06:46:41]     "exeErrorDiag": "",
[2025-11-24 06:46:41]     "pilotErrorCode": 0,
[2025-11-24 06:46:41]     "pilotErrorDiag": "",
[2025-11-24 06:46:41]  *** Listing of results directory ***
[2025-11-24 06:46:41] total 1307952
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:12 queuedata.json
[2025-11-24 06:46:41] -rwx------ 1 boinc boinc     36292 Nov 19 08:13 runpilot2-wrapper.sh
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc       100 Nov 23 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 06:46:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 14:40 run_atlas
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc       105 Nov 23 14:40 job.xml
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc      6687 Nov 23 14:40 init_data.xml
[2025-11-24 06:46:41] -rw-r--r-- 2 boinc boinc 407748165 Nov 23 14:40 EVNT.47493027._000169.pool.root.1
[2025-11-24 06:46:41] -rw-r--r-- 2 boinc boinc     15120 Nov 23 14:40 start_atlas.sh
[2025-11-24 06:46:41] drwxrwx--x 2 boinc boinc      4096 Nov 23 14:40 shared
[2025-11-24 06:46:41] -rw-r--r-- 2 boinc boinc    590104 Nov 23 14:40 input.tar.gz
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc         0 Nov 23 14:40 boinc_lockfile
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc      2773 Nov 23 14:40 pandaJob.out
[2025-11-24 06:46:41] -rw------- 1 boinc boinc    989785 Nov 23 14:41 agis_schedconf.cvmfs.json
[2025-11-24 06:46:41] drwx------ 5 boinc boinc      4096 Nov 23 14:41 pilot3
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc       532 Nov 24 06:26 boinc_task_state.xml
[2025-11-24 06:46:41] -rw------- 1 boinc boinc 908583707 Nov 24 06:37 HITS.47493029._001643.pool.root.1
[2025-11-24 06:46:41] -rw------- 1 boinc boinc        95 Nov 24 06:37 pilot_heartbeat.json
[2025-11-24 06:46:41] -rw------- 1 boinc boinc      1039 Nov 24 06:37 memory_monitor_summary.json
[2025-11-24 06:46:41] -rw------- 1 boinc boinc   1526164 Nov 24 06:37 agis_ddmendpoints.agis.ALL.json
[2025-11-24 06:46:41] -rw------- 1 boinc boinc   1676945 Nov 24 06:37 log.47493029._001643.job.log.tgz.1
[2025-11-24 06:46:41] -rw------- 1 boinc boinc      7938 Nov 24 06:38 heartbeat.json
[2025-11-24 06:46:41] -rw------- 1 boinc boinc      4909 Nov 24 06:39 pilotlog.txt
[2025-11-24 06:46:41] -rw------- 1 boinc boinc   7871910 Nov 24 06:39 log.47493029._001643.job.log.1
[2025-11-24 06:46:41] -rw------- 1 boinc boinc       353 Nov 24 06:39 output.list
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc       620 Nov 24 06:39 runtime_log
[2025-11-24 06:46:41] -rw------- 1 boinc boinc   9564160 Nov 24 06:39 result.tar.gz
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc      9085 Nov 24 06:39 runtime_log.err
[2025-11-24 06:46:41] -rw------- 1 boinc boinc       670 Nov 24 06:39 eOcNDm1Yrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2yFKDmb1dNRn.diag
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc        28 Nov 24 06:46 wrapper_checkpoint.txt
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc      8192 Nov 24 06:46 boinc_mmap_file
[2025-11-24 06:46:41] -rw-r--r-- 1 boinc boinc     21134 Nov 24 06:46 stderr.txt
[2025-11-24 06:46:41] HITS file was successfully produced:
[2025-11-24 06:46:41] -rw------- 1 boinc boinc 908583707 Nov 24 06:37 shared/HITS.pool.root.1
[2025-11-24 06:46:41]  *** Contents of shared directory: ***
[2025-11-24 06:46:41] total 1295428
[2025-11-24 06:46:41] -rw-r--r-- 2 boinc boinc 407748165 Nov 23 14:40 ATLAS.root_0
[2025-11-24 06:46:41] -rw-r--r-- 2 boinc boinc     15120 Nov 23 14:40 start_atlas.sh
[2025-11-24 06:46:41] -rw-r--r-- 2 boinc boinc    590104 Nov 23 14:40 input.tar.gz
[2025-11-24 06:46:41] -rw------- 1 boinc boinc 908583707 Nov 24 06:37 HITS.pool.root.1
[2025-11-24 06:46:41] -rw------- 1 boinc boinc   9564160 Nov 24 06:39 result.tar.gz
06:46:42 (1813111): run_atlas exited; CPU time 225609.795904
06:46:42 (1813111): called boinc_finish(0)

</stderr_txt>
]]>

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