Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:56:38 (2877945): wrapper (7.7.26015): starting
06:56:38 (2877945): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 06:56:38] Arguments: --nthreads 4
[2025-11-22 06:56:38] Threads: 4
[2025-11-22 06:56:38] Checking for CVMFS
[2025-11-22 06:56:38] No cvmfs_config command found, will try listing directly
[2025-11-22 06:56:38] CVMFS is ok
[2025-11-22 06:56:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 06:56:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 06:56:38] Further information can be found at the LHC@home message board.
[2025-11-22 06:56:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 06:56:38] Checking for apptainer binary...
[2025-11-22 06:56:38] which: no apptainer in ((null))
[2025-11-22 06:56:38] apptainer is not installed, using version from CVMFS
[2025-11-22 06:56:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 06:56:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-11-22 06:56:38] apptainer works
[2025-11-22 06:56:38] Set ATHENA_PROC_NUMBER=4
[2025-11-22 06:56:38] Set ATHENA_CORE_NUMBER=4
[2025-11-22 06:56:38] Starting ATLAS job with PandaID=6892527357
[2025-11-22 06:56:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:09:18]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:09:18] 2025-11-22 21:06:36,619 | INFO     | .. there are 7 such processes running
[2025-11-22 22:09:18] 2025-11-22 21:06:37,620 | INFO     | time since job start (54586s) is within the limit (172800.0s)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,748 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 22:09:18] 2025-11-22 21:06:38,767 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2724.5901718749988
[2025-11-22 22:09:18] 2025-11-22 21:06:38,789 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6892527357/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,790 | INFO     | extracted standard info from prmon json
[2025-11-22 22:09:18] 2025-11-22 21:06:38,790 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:09:18] 2025-11-22 21:06:38,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:09:18] 2025-11-22 21:06:38,803 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:09:18] 2025-11-22 21:06:38,804 | INFO     | sum of square deviations: 222303851840.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,820 | INFO     | sum of deviations: 638783130600.0001
[2025-11-22 22:09:18] 2025-11-22 21:06:38,820 | INFO     | mean x: 1763818313.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,821 | INFO     | mean y: 2268985.346368715
[2025-11-22 22:09:18] 2025-11-22 21:06:38,821 | INFO     | intersect: -5066007495.07501
[2025-11-22 22:09:18] 2025-11-22 21:06:38,822 | INFO     | chi2: 4.613628094558735
[2025-11-22 22:09:18] 2025-11-22 21:06:38,823 | INFO     | sum of square deviations: 218598861442.5
[2025-11-22 22:09:18] 2025-11-22 21:06:38,839 | INFO     | sum of deviations: 845338651388.4999
[2025-11-22 22:09:18] 2025-11-22 21:06:38,839 | INFO     | mean x: 1763818160.5
[2025-11-22 22:09:18] 2025-11-22 21:06:38,839 | INFO     | mean y: 2277480.643820225
[2025-11-22 22:09:18] 2025-11-22 21:06:38,839 | INFO     | intersect: -6818543338.149931
[2025-11-22 22:09:18] 2025-11-22 21:06:38,840 | INFO     | chi2: 1.9861214753769703
[2025-11-22 22:09:18] 2025-11-22 21:06:38,840 | INFO     | current chi2=1.9861214753769703 (change=56.950984460160946 %)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,841 | INFO     | sum of square deviations: 214935267170.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,857 | INFO     | sum of deviations: 858999506015.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,857 | INFO     | mean x: 1763818008.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,858 | INFO     | mean y: 2278045.283615819
[2025-11-22 22:09:18] 2025-11-22 21:06:38,858 | INFO     | intersect: -7046908519.218148
[2025-11-22 22:09:18] 2025-11-22 21:06:38,859 | INFO     | chi2: 1.895783665951737
[2025-11-22 22:09:18] 2025-11-22 21:06:38,859 | INFO     | current chi2=1.895783665951737 (change=4.548453382393786 %)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,859 | INFO     | right removable region: 884
[2025-11-22 22:09:18] 2025-11-22 21:06:38,860 | INFO     | sum of square deviations: 218598861442.5
[2025-11-22 22:09:18] 2025-11-22 21:06:38,876 | INFO     | sum of deviations: 485137963569.9998
[2025-11-22 22:09:18] 2025-11-22 21:06:38,876 | INFO     | mean x: 1763818465.5
[2025-11-22 22:09:18] 2025-11-22 21:06:38,876 | INFO     | mean y: 2275295.7662921348
[2025-11-22 22:09:18] 2025-11-22 21:06:38,876 | INFO     | intersect: -3912179211.513532
[2025-11-22 22:09:18] 2025-11-22 21:06:38,877 | INFO     | chi2: 2.825405519087388
[2025-11-22 22:09:18] 2025-11-22 21:06:38,877 | INFO     | current chi2=2.825405519087388 (change=38.75957356815037 %)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,878 | INFO     | sum of square deviations: 214935267170.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,894 | INFO     | sum of deviations: 463851704727.0001
[2025-11-22 22:09:18] 2025-11-22 21:06:38,894 | INFO     | mean x: 1763818618.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,894 | INFO     | mean y: 2276181.28700565
[2025-11-22 22:09:18] 2025-11-22 21:06:38,895 | INFO     | intersect: -3804219995.7290125
[2025-11-22 22:09:18] 2025-11-22 21:06:38,895 | INFO     | chi2: 2.8171780121153507
[2025-11-22 22:09:18] 2025-11-22 21:06:38,896 | INFO     | current chi2=2.8171780121153507 (change=0.2911973844623531 %)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,896 | INFO     | left removable region: 20
[2025-11-22 22:09:18] 2025-11-22 21:06:38,897 | INFO     | sum of square deviations: 199994968440.0
[2025-11-22 22:09:18] 2025-11-22 21:06:38,912 | INFO     | sum of deviations: 646118877963.4999
[2025-11-22 22:09:18] 2025-11-22 21:06:38,912 | INFO     | mean x: 1763818587.5
[2025-11-22 22:09:18] 2025-11-22 21:06:38,912 | INFO     | mean y: 2286854.563657407
[2025-11-22 22:09:18] 2025-11-22 21:06:38,912 | INFO     | intersect: -5696038936.210247
[2025-11-22 22:09:18] 2025-11-22 21:06:38,913 | INFO     | chi2: 0.07704890345060801
[2025-11-22 22:09:18] 2025-11-22 21:06:38,913 | INFO     | current memory leak: 3.23 B/s (using 864 data points, chi2=0.08)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | could have reported an average CPU frequency of 2709 MHz (34 samples)
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | ..............................
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | . Timing measurements:
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | . get job = 0 s
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | . initial setup = 1 s
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | . payload setup = 9 s
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | . stage-in = 0 s
[2025-11-22 22:09:18] 2025-11-22 21:06:38,914 | INFO     | . payload execution = 54545 s
[2025-11-22 22:09:18] 2025-11-22 21:06:38,915 | INFO     | . stage-out = 2 s
[2025-11-22 22:09:18] 2025-11-22 21:06:38,915 | INFO     | . log creation = 0 s
[2025-11-22 22:09:18] 2025-11-22 21:06:38,915 | INFO     | ..............................
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | 
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | job summary report
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | --------------------------------------------------
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | PanDA job id: 6892527357
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | task id: 47493029
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | errors: (none)
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | pilot state: finished 
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | transexitcode: 0
[2025-11-22 22:09:18] 2025-11-22 21:06:39,467 | INFO     | exeerrorcode: 0
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | exeerrordiag: 
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | exitcode: 0
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | exitmsg: OK
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | cpuconsumptiontime: 216014 s
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | nevents: 1000
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | neventsw: 0
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | pid: 2891340
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | pgrp: 2891340
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | corecount: 4
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | event service: False
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | sizes: {0: 2298637, 1: 2298836, 7: 2299098, 11: 2299126, 54559: 2351683, 54561: 2360885, 54569: 2361075}
[2025-11-22 22:09:18] 2025-11-22 21:06:39,468 | INFO     | --------------------------------------------------
[2025-11-22 22:09:18] 2025-11-22 21:06:39,469 | INFO     | 
[2025-11-22 22:09:18] 2025-11-22 21:06:39,469 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-11-22 22:09:18] 2025-11-22 21:06:39,495 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,495 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:09:18] 2025-11-22 21:06:39,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,497 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:09:18] 2025-11-22 21:06:39,497 | INFO     | job 6892527357 has completed (purged errors)
[2025-11-22 22:09:18] 2025-11-22 21:06:39,497 | INFO     | overall cleanup function is called
[2025-11-22 22:09:18] 2025-11-22 21:06:40,513 | INFO     | --- collectZombieJob: --- 10, [2891340]
[2025-11-22 22:09:18] 2025-11-22 21:06:40,513 | INFO     | zombie collector waiting for pid 2891340
[2025-11-22 22:09:18] 2025-11-22 21:06:40,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:09:18] 2025-11-22 21:06:40,513 | INFO     | collected zombie processes
[2025-11-22 22:09:18] 2025-11-22 21:06:40,513 | INFO     | will attempt to kill all subprocesses of pid=2891340
[2025-11-22 22:09:18] 2025-11-22 21:06:41,314 | INFO     | process IDs to be killed: [2891340] (in reverse order)
[2025-11-22 22:09:18] 2025-11-22 21:06:41,564 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:09:18] 2025-11-22 21:06:41,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:09:18] 2025-11-22 21:06:41,598 | INFO     | did not find any defunct processes belonging to 2891340
[2025-11-22 22:09:18] 2025-11-22 21:06:41,630 | INFO     | did not find any defunct processes belonging to 2891340
[2025-11-22 22:09:18] 2025-11-22 21:06:41,631 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:09:18] 2025-11-22 21:06:41,631 | INFO     | ready for new job
[2025-11-22 22:09:18] 2025-11-22 21:06:41,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:09:18] 2025-11-22 21:06:41,637 | INFO     | ***************************************
[2025-11-22 22:09:18] 2025-11-22 21:06:41,638 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:09:18] 2025-11-22 21:06:41,638 | INFO     | ***************************************
[2025-11-22 22:09:18] 2025-11-22 21:06:41,638 | INFO     | 
[2025-11-22 22:09:18] 2025-11-22 21:06:41,646 | INFO     | architecture information:
[2025-11-22 22:09:18] 2025-11-22 21:06:41,647 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:09:18] 2025-11-22 21:06:41,673 | INFO     | cat /etc/os-release:
[2025-11-22 22:09:18] NAME="CentOS Linux"
[2025-11-22 22:09:18] VERSION="7 (Core)"
[2025-11-22 22:09:18] ID="centos"
[2025-11-22 22:09:18] ID_LIKE="rhel fedora"
[2025-11-22 22:09:18] VERSION_ID="7"
[2025-11-22 22:09:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:09:18] ANSI_COLOR="0;31"
[2025-11-22 22:09:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:09:18] HOME_URL="https://www.centos.org/"
[2025-11-22 22:09:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:09:18] 
[2025-11-22 22:09:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:09:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:09:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:09:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:09:18] 
[2025-11-22 22:09:18] 2025-11-22 21:06:41,673 | INFO     | ***************************************
[2025-11-22 22:09:18] 2025-11-22 21:06:42,176 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-11-22 22:09:18] 2025-11-22 21:06:42,200 | INFO     | sufficient remaining disk space (3311808806912 B)
[2025-11-22 22:09:18] 2025-11-22 21:06:42,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:09:18] 2025-11-22 21:06:42,200 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:09:18] 2025-11-22 21:06:42,200 | INFO     | update_server=False
[2025-11-22 22:09:18] 2025-11-22 21:06:42,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:09:18] 2025-11-22 21:06:42,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:09:18] 2025-11-22 21:06:42,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:09:18] 2025-11-22 21:06:42,439 | INFO     | all data control threads have been joined
[2025-11-22 22:09:18] 2025-11-22 21:06:42,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:09:18] 2025-11-22 21:06:42,506 | INFO     | aborting loop
[2025-11-22 22:09:18] 2025-11-22 21:06:43,206 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:43,246 | INFO     | all job control threads have been joined
[2025-11-22 22:09:18] 2025-11-22 21:06:43,409 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:43,440 | INFO     | [data] control thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:43,511 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:43,554 | INFO     | all payload control threads have been joined
[2025-11-22 22:09:18] 2025-11-22 21:06:43,564 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:43,830 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:43,877 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:44,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:09:18] 2025-11-22 21:06:44,207 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:44,252 | INFO     | [job] control thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:44,294 | INFO     | [job] validate thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:44,376 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:44,559 | INFO     | [payload] control thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:44,567 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:45,017 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:46,208 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:06:53,015 | INFO     | job.realtimelogging is not enabled
[2025-11-22 22:09:18] 2025-11-22 21:06:54,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:09:18] 2025-11-22 21:07:11,671 | INFO     | PID=2882058 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 22:09:18] 2025-11-22 21:07:11,671 | INFO     | .. there are 7 such processes running
[2025-11-22 22:09:18] 2025-11-22 21:07:11,671 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:09:18] 2025-11-22 21:07:11,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:09:18] 2025-11-22 21:07:11,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:09:18] 2025-11-22 21:07:18,165 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:09:18] 2025-11-22 21:07:18,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23115780208448)>', '<ExcThread(monitor, started 23115530708736)>']
[2025-11-22 22:09:18] 2025-11-22 21:07:18,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:09:18] 2025-11-22 21:07:18,707 | INFO     | [monitor] control thread has ended
[2025-11-22 22:09:18] 2025-11-22 21:07:23,680 | INFO     | all workflow threads have been joined
[2025-11-22 22:09:18] 2025-11-22 21:07:23,684 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:09:18] 2025-11-22 21:07:23,684 | INFO     | traces error code: 0
[2025-11-22 22:09:18] 2025-11-22 21:07:23,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:09:18] 2025-11-22 21:07:23,820 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:09:18] 2025-11-22 21:07:23,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:09:18] 2025-11-22 21:07:23,828 [wrapper] pilotpid: 2882058
[2025-11-22 22:09:18] 2025-11-22 21:07:23,832 [wrapper] Pilot exit status: 0
[2025-11-22 22:09:18] 2025-11-22 21:07:23,845 [wrapper] pandaids: 6892527357
[2025-11-22 22:09:18] 2025-11-22 21:07:24,020 [wrapper] cleanup supervisor_pilot   89759 2882059
[2025-11-22 22:09:18] 2025-11-22 21:07:24,024 [wrapper] Test setup, not cleaning
[2025-11-22 22:09:18] 2025-11-22 21:07:24,030 [wrapper] apfmon messages muted
[2025-11-22 22:09:18] 2025-11-22 21:07:24,034 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:09:18] 2025-11-22 21:07:24,037 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:09:18]  *** Error codes and diagnostics ***
[2025-11-22 22:09:18]     "exeErrorCode": 0,
[2025-11-22 22:09:18]     "exeErrorDiag": "",
[2025-11-22 22:09:18]     "pilotErrorCode": 0,
[2025-11-22 22:09:18]     "pilotErrorDiag": "",
[2025-11-22 22:09:18]  *** Listing of results directory ***
[2025-11-22 22:09:18] total 1305388
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:07 queuedata.json
[2025-11-22 22:09:18] -rwx------ 1 boinc boinc     36292 Nov 19 08:07 runpilot2-wrapper.sh
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc       100 Nov 22 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:09:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 06:56 run_atlas
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc       105 Nov 22 06:56 job.xml
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc      6686 Nov 22 06:56 init_data.xml
[2025-11-22 22:09:18] -rw-r--r-- 2 boinc boinc 406861831 Nov 22 06:56 EVNT.47493027._000127.pool.root.1
[2025-11-22 22:09:18] -rw-r--r-- 2 boinc boinc     15120 Nov 22 06:56 start_atlas.sh
[2025-11-22 22:09:18] drwxrwx--x 2 boinc boinc      4096 Nov 22 06:56 shared
[2025-11-22 22:09:18] -rw-r--r-- 2 boinc boinc    590091 Nov 22 06:56 input.tar.gz
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc         0 Nov 22 06:56 boinc_lockfile
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc      2773 Nov 22 06:56 pandaJob.out
[2025-11-22 22:09:18] -rw------- 1 boinc boinc    989752 Nov 22 06:56 agis_schedconf.cvmfs.json
[2025-11-22 22:09:18] drwx------ 5 boinc boinc      4096 Nov 22 06:56 pilot3
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc       532 Nov 22 21:59 boinc_task_state.xml
[2025-11-22 22:09:18] -rw------- 1 boinc boinc 907553474 Nov 22 22:05 HITS.47493029._001226.pool.root.1
[2025-11-22 22:09:18] -rw------- 1 boinc boinc      1040 Nov 22 22:06 memory_monitor_summary.json
[2025-11-22 22:09:18] -rw------- 1 boinc boinc        95 Nov 22 22:06 pilot_heartbeat.json
[2025-11-22 22:09:18] -rw------- 1 boinc boinc   1526164 Nov 22 22:06 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:09:18] -rw------- 1 boinc boinc   1633189 Nov 22 22:06 log.47493029._001226.job.log.tgz.1
[2025-11-22 22:09:18] -rw------- 1 boinc boinc      8593 Nov 22 22:06 heartbeat.json
[2025-11-22 22:09:18] -rw------- 1 boinc boinc      4907 Nov 22 22:07 pilotlog.txt
[2025-11-22 22:09:18] -rw------- 1 boinc boinc   7557981 Nov 22 22:07 log.47493029._001226.job.log.1
[2025-11-22 22:09:18] -rw------- 1 boinc boinc       353 Nov 22 22:07 output.list
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc       620 Nov 22 22:07 runtime_log
[2025-11-22 22:09:18] -rw------- 1 boinc boinc   9205760 Nov 22 22:07 result.tar.gz
[2025-11-22 22:09:18] -rw------- 1 boinc boinc       670 Nov 22 22:07 u4pKDmKTrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmigGKDmiS30Tn.diag
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc      9085 Nov 22 22:07 runtime_log.err
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc        28 Nov 22 22:09 wrapper_checkpoint.txt
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc      8192 Nov 22 22:09 boinc_mmap_file
[2025-11-22 22:09:18] -rw-r--r-- 1 boinc boinc     20981 Nov 22 22:09 stderr.txt
[2025-11-22 22:09:18] HITS file was successfully produced:
[2025-11-22 22:09:18] -rw------- 1 boinc boinc 907553474 Nov 22 22:05 shared/HITS.pool.root.1
[2025-11-22 22:09:18]  *** Contents of shared directory: ***
[2025-11-22 22:09:18] total 1293208
[2025-11-22 22:09:18] -rw-r--r-- 2 boinc boinc 406861831 Nov 22 06:56 ATLAS.root_0
[2025-11-22 22:09:18] -rw-r--r-- 2 boinc boinc     15120 Nov 22 06:56 start_atlas.sh
[2025-11-22 22:09:18] -rw-r--r-- 2 boinc boinc    590091 Nov 22 06:56 input.tar.gz
[2025-11-22 22:09:18] -rw------- 1 boinc boinc 907553474 Nov 22 22:05 HITS.pool.root.1
[2025-11-22 22:09:18] -rw------- 1 boinc boinc   9205760 Nov 22 22:07 result.tar.gz
22:09:19 (2877945): run_atlas exited; CPU time 218757.278944
22:09:19 (2877945): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN