Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:09:50 (615538): wrapper (7.7.26015): starting
03:09:50 (615538): wrapper: running run_atlas (--nthreads 12)
[2025-11-19 03:09:50] Arguments: --nthreads 12
[2025-11-19 03:09:50] Threads: 12
[2025-11-19 03:09:50] Checking for CVMFS
[2025-11-19 03:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 03:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 03:09:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 03:09:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 03:09:51] 2.11.5.0 799525 17940 237312 153041 2 302 25500936 45568001 17506 130560 0 187405185 99.830 88905739 23584 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-19 03:09:51] CVMFS is ok
[2025-11-19 03:09:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 03:09:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 03:09:51] Further information can be found at the LHC@home message board.
[2025-11-19 03:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 03:09:51] Checking for apptainer binary...
[2025-11-19 03:09:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 03:09:51] Running /usr/bin/apptainer --version
[2025-11-19 03:09:51] apptainer version 1.4.1-1.el9
[2025-11-19 03:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 03:09:51] wns0031.triumf.lcg
[2025-11-19 03:09:51] apptainer works
[2025-11-19 03:09:51] Set ATHENA_PROC_NUMBER=12
[2025-11-19 03:09:51] Set ATHENA_CORE_NUMBER=12
[2025-11-19 03:09:51] Starting ATLAS job with PandaID=6892549366
[2025-11-19 03:09:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 03:16:44]  *** The last 200 lines of the pilot log: ***
[2025-11-19 03:16:44] 2025-11-19 11:16:11,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | WARNING  | wrong length of table data, x=[1763550696.0, 1763550757.0, 1763550818.0], y=[3082.0, 699860.0, 572535.0] (must be same and length>=4)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | ..............................
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | . Timing measurements:
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | . get job = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . initial setup = 4 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . payload setup = 17 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . stage-in = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . payload execution = 156 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . stage-out = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . log creation = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | ..............................
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892549366/pilotlog.txt
[2025-11-19 03:16:44] 2025-11-19 11:16:11,219 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-19 03:16:44] - Log from pilotlog.txt -
[2025-11-19 03:16:44] 2025-11-19 11:16:11,103 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892549366/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,104 | INFO     | extracted standard info from prmon json
[2025-11-19 03:16:44] 2025-11-19 11:16:11,104 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 03:16:44] 2025-11-19 11:16:11,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 03:16:44] 2025-11-19 11:16:11,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 03:16:44] 2025-11-19 11:16:11,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | WARNING  | wrong length of table data, x=[1763550696.0, 1763550757.0, 1763550818.0], y=[3082.0, 699860.0, 572535.0] (must be same and length>=4)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | ..............................
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | . Timing measurements:
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | . get job = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . initial setup = 4 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . payload setup = 17 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . stage-in = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . payload execution = 156 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . stage-out = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . log creation = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | ..............................
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892549366/pilotlog.txt
[2025-11-19 03:16:44] 2025-11-19 11:16:11,219 | WARNING  | 
[2025-11-19 03:16:44] [begin log extracts]
[2025-11-19 03:16:44] - Log from pilotlog.txt -
[2025-11-19 03:16:44] 2025-11-19 11:16:11,103 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892549366/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,104 | INFO     | extracted standard info from prmon json
[2025-11-19 03:16:44] 2025-11-19 11:16:11,104 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 03:16:44] 2025-11-19 11:16:11,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 03:16:44] 2025-11-19 11:16:11,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 03:16:44] 2025-11-19 11:16:11,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | WARNING  | wrong length of table data, x=[1763550696.0, 1763550757.0, 1763550818.0], y=[3082.0, 699860.0, 572535.0] (must be same and length>=4)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | could have reported an average CPU frequency of 2575 MHz (4 samples)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | ..............................
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | . Timing measurements:
[2025-11-19 03:16:44] 2025-11-19 11:16:11,111 | INFO     | . get job = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . initial setup = 4 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . payload setup = 17 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . stage-in = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . payload execution = 156 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . stage-out = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | . log creation = 0 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | ..............................
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 03:16:44] 2025-11-19 11:16:11,112 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892549366/pilotlog.txt
[2025-11-19 03:16:44] [end log extracts]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,220 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,220 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-19 03:16:44] 2025-11-19 11:16:11,376 | INFO     | 
[2025-11-19 03:16:44] 2025-11-19 11:16:11,377 | INFO     | job summary report
[2025-11-19 03:16:44] 2025-11-19 11:16:11,377 | INFO     | --------------------------------------------------
[2025-11-19 03:16:44] 2025-11-19 11:16:11,377 | INFO     | PanDA job id: 6892549366
[2025-11-19 03:16:44] 2025-11-19 11:16:11,377 | INFO     | task id: 47493029
[2025-11-19 03:16:44] 2025-11-19 11:16:11,377 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-19 03:13:50,075 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-19 03:16:44] 2025-11-19 11:16:11,377 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-19 03:16:44] 2025-11-19 11:16:11,377 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | pilot state: failed 
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | transexitcode: 65
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | exeerrorcode: 65
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | exitcode: 65
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | cpuconsumptiontime: 46 s
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | nevents: 0
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | neventsw: 0
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | pid: 633363
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | pgrp: 633363
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | corecount: 12
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | event service: False
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | sizes: {0: 2297026, 1: 2297197, 2: 2297253, 13: 2297253, 17: 2297571, 24: 2297599, 175: 2323164, 176: 2323168, 177: 2327514, 178: 2327542, 311: 2327708}
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | --------------------------------------------------
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | 
[2025-11-19 03:16:44] 2025-11-19 11:16:11,378 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-19 03:16:44] 2025-11-19 11:16:11,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 03:16:44] 2025-11-19 11:16:11,524 | INFO     | job 6892549366 has completed (purged errors)
[2025-11-19 03:16:44] 2025-11-19 11:16:11,525 | INFO     | overall cleanup function is called
[2025-11-19 03:16:44] 2025-11-19 11:16:12,547 | INFO     | --- collectZombieJob: --- 10, [633363]
[2025-11-19 03:16:44] 2025-11-19 11:16:12,547 | INFO     | zombie collector waiting for pid 633363
[2025-11-19 03:16:44] 2025-11-19 11:16:12,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 03:16:44] 2025-11-19 11:16:12,547 | INFO     | collected zombie processes
[2025-11-19 03:16:44] 2025-11-19 11:16:12,547 | INFO     | will attempt to kill all subprocesses of pid=633363
[2025-11-19 03:16:44] 2025-11-19 11:16:13,408 | INFO     | process IDs to be killed: [633363] (in reverse order)
[2025-11-19 03:16:44] 2025-11-19 11:16:13,484 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 03:16:44] 2025-11-19 11:16:13,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 03:16:44] 2025-11-19 11:16:13,515 | INFO     | did not find any defunct processes belonging to 633363
[2025-11-19 03:16:44] 2025-11-19 11:16:13,566 | INFO     | did not find any defunct processes belonging to 633363
[2025-11-19 03:16:44] 2025-11-19 11:16:13,567 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 03:16:44] 2025-11-19 11:16:13,567 | INFO     | ready for new job
[2025-11-19 03:16:44] 2025-11-19 11:16:13,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 03:16:44] 2025-11-19 11:16:13,580 | INFO     | ***************************************
[2025-11-19 03:16:44] 2025-11-19 11:16:13,580 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 03:16:44] 2025-11-19 11:16:13,580 | INFO     | ***************************************
[2025-11-19 03:16:44] 2025-11-19 11:16:13,580 | INFO     | 
[2025-11-19 03:16:44] 2025-11-19 11:16:13,582 | INFO     | architecture information:
[2025-11-19 03:16:44] 2025-11-19 11:16:13,602 | INFO     | executing command: cat /etc/os-release
[2025-11-19 03:16:44] 2025-11-19 11:16:13,621 | INFO     | cat /etc/os-release:
[2025-11-19 03:16:44] NAME="CentOS Linux"
[2025-11-19 03:16:44] VERSION="7 (Core)"
[2025-11-19 03:16:44] ID="centos"
[2025-11-19 03:16:44] ID_LIKE="rhel fedora"
[2025-11-19 03:16:44] VERSION_ID="7"
[2025-11-19 03:16:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 03:16:44] ANSI_COLOR="0;31"
[2025-11-19 03:16:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 03:16:44] HOME_URL="https://www.centos.org/"
[2025-11-19 03:16:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 03:16:44] 
[2025-11-19 03:16:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 03:16:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 03:16:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 03:16:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 03:16:44] 
[2025-11-19 03:16:44] 2025-11-19 11:16:13,621 | INFO     | ***************************************
[2025-11-19 03:16:44] 2025-11-19 11:16:14,125 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-19 03:16:44] 2025-11-19 11:16:14,208 | INFO     | sufficient remaining disk space (1821916528640 B)
[2025-11-19 03:16:44] 2025-11-19 11:16:14,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 03:16:44] 2025-11-19 11:16:14,208 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 03:16:44] 2025-11-19 11:16:14,208 | INFO     | update_server=False
[2025-11-19 03:16:44] 2025-11-19 11:16:14,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 03:16:44] 2025-11-19 11:16:14,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 03:16:44] 2025-11-19 11:16:14,209 | INFO     | aborting loop
[2025-11-19 03:16:44] 2025-11-19 11:16:14,880 | INFO     | all job control threads have been joined
[2025-11-19 03:16:44] 2025-11-19 11:16:14,987 | INFO     | all data control threads have been joined
[2025-11-19 03:16:44] 2025-11-19 11:16:15,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 03:16:44] 2025-11-19 11:16:15,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 03:16:44] 2025-11-19 11:16:15,214 | INFO     | [job] retrieve thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:15,215 | INFO     | [job] job monitor thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:15,461 | INFO     | [payload] validate_post thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:15,668 | INFO     | all payload control threads have been joined
[2025-11-19 03:16:44] 2025-11-19 11:16:15,887 | INFO     | [job] control thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:15,964 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:15,993 | INFO     | [data] control thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:16,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:16,260 | INFO     | [job] validate thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:16,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 03:16:44] 2025-11-19 11:16:16,531 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:16,532 | INFO     | [data] copytool_in thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:16,576 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:16,605 | INFO     | [payload] failed_post thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:16,674 | INFO     | [payload] control thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:17,214 | INFO     | [data] copytool_out thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:17,408 | INFO     | [job] queue monitor thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:19,108 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 03:16:44] 2025-11-19 11:16:23,279 | INFO     | [monitor] cgroup control has ended
[2025-11-19 03:16:44] 2025-11-19 11:16:24,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140535097444160)>', '<ExcThread(monitor, started 140534416930560)>']
[2025-11-19 03:16:44] 2025-11-19 11:16:29,991 | INFO     | all workflow threads have been joined
[2025-11-19 03:16:44] 2025-11-19 11:16:29,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 03:16:44] 2025-11-19 11:16:29,991 | INFO     | traces error code: 0
[2025-11-19 03:16:44] 2025-11-19 11:16:29,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 03:16:44] 2025-11-19 11:16:43,833 | INFO     | PID=620642 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-19 03:16:44] 2025-11-19 11:16:43,834 | INFO     | .. there are 28 such processes running
[2025-11-19 03:16:44] 2025-11-19 11:16:43,835 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 03:16:44] 2025-11-19 11:16:43,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 03:16:44] 2025-11-19 11:16:43,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 03:16:44] 2025-11-19 11:16:43,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 03:16:44] 2025-11-19 11:16:43,835 | INFO     | [monitor] control thread has ended
[2025-11-19 03:16:44] 2025-11-19 11:16:43,959 [wrapper] ==== pilot stdout END ====
[2025-11-19 03:16:44] 2025-11-19 11:16:43,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 03:16:44] 2025-11-19 11:16:43,963 [wrapper] pilotpid: 620642
[2025-11-19 03:16:44] 2025-11-19 11:16:43,965 [wrapper] Pilot exit status: 0
[2025-11-19 03:16:44] 2025-11-19 11:16:43,989 [wrapper] pandaids: 6892549366
[2025-11-19 03:16:44] 2025-11-19 11:16:44,035 [wrapper] cleanup supervisor_pilot  620648 620643
[2025-11-19 03:16:44] 2025-11-19 11:16:44,037 [wrapper] Test setup, not cleaning
[2025-11-19 03:16:44] 2025-11-19 11:16:44,039 [wrapper] apfmon messages muted
[2025-11-19 03:16:44] 2025-11-19 11:16:44,041 [wrapper] ==== wrapper stdout END ====
[2025-11-19 03:16:44] 2025-11-19 11:16:44,043 [wrapper] ==== wrapper stderr END ====
[2025-11-19 03:16:44]  *** Error codes and diagnostics ***
[2025-11-19 03:16:44]     "exeErrorCode": 65,
[2025-11-19 03:16:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-19 03:16:44]     "pilotErrorCode": 1305,
[2025-11-19 03:16:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-19 03:16:44]  *** Listing of results directory ***
[2025-11-19 03:16:44] total 404304
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc    576529 Nov 19 00:32 pilot3.tar.gz
[2025-11-19 03:16:44] -rwx------. 1 boinc boinc     36292 Nov 19 00:58 runpilot2-wrapper.sh
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc      5112 Nov 19 00:58 queuedata.json
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc       100 Nov 19 03:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 03:16:44] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 03:09 run_atlas
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc       105 Nov 19 03:09 job.xml
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc      6594 Nov 19 03:09 init_data.xml
[2025-11-19 03:16:44] -rw-r--r--. 2 boinc boinc 409768252 Nov 19 03:09 EVNT.47493027._000361.pool.root.1
[2025-11-19 03:16:44] -rw-r--r--. 2 boinc boinc    590095 Nov 19 03:09 input.tar.gz
[2025-11-19 03:16:44] -rw-r--r--. 2 boinc boinc     15120 Nov 19 03:09 start_atlas.sh
[2025-11-19 03:16:44] drwxrwx--x. 2 boinc boinc      4096 Nov 19 03:09 shared
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc         0 Nov 19 03:09 boinc_lockfile
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc      2773 Nov 19 03:09 pandaJob.out
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc    989442 Nov 19 03:10 agis_schedconf.cvmfs.json
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc   1525063 Nov 19 03:10 agis_ddmendpoints.agis.ALL.json
[2025-11-19 03:16:44] drwx------. 5 boinc boinc      4096 Nov 19 03:10 pilot3
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc       524 Nov 19 03:12 boinc_task_state.xml
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc      1000 Nov 19 03:13 memory_monitor_summary.json
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc     49657 Nov 19 03:13 log.47493029._003563.job.log.tgz.1
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc     10341 Nov 19 03:16 heartbeat.json
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc      8192 Nov 19 03:16 boinc_mmap_file
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc        23 Nov 19 03:16 wrapper_checkpoint.txt
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc        95 Nov 19 03:16 pilot_heartbeat.json
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc       822 Nov 19 03:16 pilotlog.txt
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc    108668 Nov 19 03:16 log.47493029._003563.job.log.1
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc       186 Nov 19 03:16 output.list
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc       620 Nov 19 03:16 runtime_log
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc    184320 Nov 19 03:16 result.tar.gz
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc      8528 Nov 19 03:16 runtime_log.err
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc       647 Nov 19 03:16 h8nLDmLCtf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK7GKDm5CicJo.diag
[2025-11-19 03:16:44] -rw-r--r--. 1 boinc boinc     22585 Nov 19 03:16 stderr.txt
[2025-11-19 03:16:44] No HITS result produced
[2025-11-19 03:16:44]  *** Contents of shared directory: ***
[2025-11-19 03:16:44] total 400948
[2025-11-19 03:16:44] -rw-r--r--. 2 boinc boinc 409768252 Nov 19 03:09 ATLAS.root_0
[2025-11-19 03:16:44] -rw-r--r--. 2 boinc boinc    590095 Nov 19 03:09 input.tar.gz
[2025-11-19 03:16:44] -rw-r--r--. 2 boinc boinc     15120 Nov 19 03:09 start_atlas.sh
[2025-11-19 03:16:44] -rw-------. 1 boinc boinc    184320 Nov 19 03:16 result.tar.gz
03:16:45 (615538): run_atlas exited; CPU time 50.632973
03:16:45 (615538): called boinc_finish(0)

</stderr_txt>
]]>

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