Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:06:13 (4135342): wrapper (7.7.26015): starting
06:06:13 (4135342): wrapper: running run_atlas (--nthreads 2)
[2025-11-23 06:06:13] Arguments: --nthreads 2
[2025-11-23 06:06:13] Threads: 2
[2025-11-23 06:06:13] Checking for CVMFS
[2025-11-23 06:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 06:06:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 06:06:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 06:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 06:06:13] 2.9.2.0 3301020 5064 58756 153197 0 81 35361411 36864000 1953 130560 0 2623122 99.978 273003 6768 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 06:06:13] CVMFS is ok
[2025-11-23 06:06:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 06:06:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 06:06:13] Further information can be found at the LHC@home message board.
[2025-11-23 06:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 06:06:13] Checking for apptainer binary...
[2025-11-23 06:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 06:06:13] Running /usr/bin/apptainer --version
[2025-11-23 06:06:13] apptainer version 1.4.1-1.1
[2025-11-23 06:06:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 06:06:13] thA365a
[2025-11-23 06:06:13] apptainer works
[2025-11-23 06:06:13] Set ATHENA_PROC_NUMBER=2
[2025-11-23 06:06:13] Set ATHENA_CORE_NUMBER=2
[2025-11-23 06:06:13] Starting ATLAS job with PandaID=6892526223
[2025-11-23 06:06:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 18:55:38]  *** The last 200 lines of the pilot log: ***
[2025-11-23 18:55:38] 2025-11-23 17:54:55,482 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6892526223/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,482 | INFO     | extracted standard info from prmon json
[2025-11-23 18:55:38] 2025-11-23 17:54:55,482 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 18:55:38] 2025-11-23 17:54:55,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 18:55:38] 2025-11-23 17:54:55,487 | INFO     | fitting pss+swap vs Time
[2025-11-23 18:55:38] 2025-11-23 17:54:55,487 | INFO     | sum of square deviations: 133980949305.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,492 | INFO     | sum of deviations: 349365158480.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,492 | INFO     | mean x: 1763897428.5
[2025-11-23 18:55:38] 2025-11-23 17:54:55,492 | INFO     | mean y: 2004660.5158730159
[2025-11-23 18:55:38] 2025-11-23 17:54:55,492 | INFO     | intersect: -4597487340.750082
[2025-11-23 18:55:38] 2025-11-23 17:54:55,492 | INFO     | chi2: 3.3488393680112134
[2025-11-23 18:55:38] 2025-11-23 17:54:55,492 | INFO     | sum of square deviations: 131340137000.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,497 | INFO     | sum of deviations: 431530756699.99976
[2025-11-23 18:55:38] 2025-11-23 17:54:55,497 | INFO     | mean x: 1763897276.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,497 | INFO     | mean y: 2009392.9174434089
[2025-11-23 18:55:38] 2025-11-23 17:54:55,497 | INFO     | intersect: -5793446159.663169
[2025-11-23 18:55:38] 2025-11-23 17:54:55,497 | INFO     | chi2: 2.1853246666985093
[2025-11-23 18:55:38] 2025-11-23 17:54:55,497 | INFO     | current chi2=2.1853246666985093 (change=34.74381937894156 %)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,498 | INFO     | sum of square deviations: 128734255582.5
[2025-11-23 18:55:38] 2025-11-23 17:54:55,502 | INFO     | sum of deviations: 426285491658.4999
[2025-11-23 18:55:38] 2025-11-23 17:54:55,502 | INFO     | mean x: 1763897123.5
[2025-11-23 18:55:38] 2025-11-23 17:54:55,502 | INFO     | mean y: 2009085.9584450403
[2025-11-23 18:55:38] 2025-11-23 17:54:55,503 | INFO     | intersect: -5838889664.1363735
[2025-11-23 18:55:38] 2025-11-23 17:54:55,503 | INFO     | chi2: 2.1849770924418084
[2025-11-23 18:55:38] 2025-11-23 17:54:55,503 | INFO     | current chi2=2.1849770924418084 (change=0.015904925341187634 %)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,503 | INFO     | right removable region: 745
[2025-11-23 18:55:38] 2025-11-23 17:54:55,503 | INFO     | sum of square deviations: 131340137000.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,508 | INFO     | sum of deviations: 214747326658.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,508 | INFO     | mean x: 1763897581.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,508 | INFO     | mean y: 2012425.5832223701
[2025-11-23 18:55:38] 2025-11-23 17:54:55,508 | INFO     | intersect: -2882043421.094195
[2025-11-23 18:55:38] 2025-11-23 17:54:55,508 | INFO     | chi2: 1.45802511375665
[2025-11-23 18:55:38] 2025-11-23 17:54:55,508 | INFO     | current chi2=1.45802511375665 (change=56.46177814068961 %)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,509 | INFO     | sum of square deviations: 128734255582.5
[2025-11-23 18:55:38] 2025-11-23 17:54:55,513 | INFO     | sum of deviations: 175431414874.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,513 | INFO     | mean x: 1763897733.5
[2025-11-23 18:55:38] 2025-11-23 17:54:55,513 | INFO     | mean y: 2014720.2493297588
[2025-11-23 18:55:38] 2025-11-23 17:54:55,513 | INFO     | intersect: -2401720584.5517974
[2025-11-23 18:55:38] 2025-11-23 17:54:55,513 | INFO     | chi2: 1.238315111680105
[2025-11-23 18:55:38] 2025-11-23 17:54:55,514 | INFO     | current chi2=1.238315111680105 (change=15.069013558377941 %)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,514 | INFO     | left removable region: 20
[2025-11-23 18:55:38] 2025-11-23 17:54:55,514 | INFO     | sum of square deviations: 118165750450.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,518 | INFO     | sum of deviations: 229817547214.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,518 | INFO     | mean x: 1763897703.0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,518 | INFO     | mean y: 2020708.1406896552
[2025-11-23 18:55:38] 2025-11-23 17:54:55,518 | INFO     | intersect: -3428538841.442137
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | chi2: 0.06066854641962809
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | current memory leak: 1.94 B/s (using 725 data points, chi2=0.06)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | could have reported an average CPU frequency of 4409 MHz (29 samples)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | ..............................
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . Timing measurements:
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . get job = 0 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . initial setup = 1 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . payload setup = 3 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . stage-in = 0 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . payload execution = 46090 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . stage-out = 1 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | . log creation = 0 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,519 | INFO     | ..............................
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | 
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | job summary report
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | --------------------------------------------------
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | PanDA job id: 6892526223
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | task id: 47493029
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | errors: (none)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | pilot state: finished 
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | transexitcode: 0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | exeerrorcode: 0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | exeerrordiag: 
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | exitcode: 0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | exitmsg: OK
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | cpuconsumptiontime: 91373 s
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | nevents: 1000
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | neventsw: 0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | pid: 4145471
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | pgrp: 4145471
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | corecount: 2
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | event service: False
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | sizes: {0: 2298795, 2: 2299057, 10: 2299085, 46094: 2345987, 46095: 2345986, 46096: 2355226, 46102: 2355416}
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | --------------------------------------------------
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | 
[2025-11-23 18:55:38] 2025-11-23 17:54:55,548 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 18:55:38] 2025-11-23 17:54:55,561 | INFO     | job 6892526223 has completed (purged errors)
[2025-11-23 18:55:38] 2025-11-23 17:54:55,561 | INFO     | overall cleanup function is called
[2025-11-23 18:55:38] 2025-11-23 17:54:56,566 | INFO     | --- collectZombieJob: --- 10, [4145471]
[2025-11-23 18:55:38] 2025-11-23 17:54:56,566 | INFO     | zombie collector waiting for pid 4145471
[2025-11-23 18:55:38] 2025-11-23 17:54:56,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 18:55:38] 2025-11-23 17:54:56,566 | INFO     | collected zombie processes
[2025-11-23 18:55:38] 2025-11-23 17:54:56,566 | INFO     | will attempt to kill all subprocesses of pid=4145471
[2025-11-23 18:55:38] 2025-11-23 17:54:56,601 | INFO     | process IDs to be killed: [4145471] (in reverse order)
[2025-11-23 18:55:38] 2025-11-23 17:54:56,623 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 18:55:38] 2025-11-23 17:54:56,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 18:55:38] 2025-11-23 17:54:56,624 | INFO     | did not find any defunct processes belonging to 4145471
[2025-11-23 18:55:38] 2025-11-23 17:54:56,625 | INFO     | did not find any defunct processes belonging to 4145471
[2025-11-23 18:55:38] 2025-11-23 17:54:56,626 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 18:55:38] 2025-11-23 17:54:56,626 | INFO     | ready for new job
[2025-11-23 18:55:38] 2025-11-23 17:54:56,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 18:55:38] 2025-11-23 17:54:56,627 | INFO     | ***************************************
[2025-11-23 18:55:38] 2025-11-23 17:54:56,627 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 18:55:38] 2025-11-23 17:54:56,627 | INFO     | ***************************************
[2025-11-23 18:55:38] 2025-11-23 17:54:56,627 | INFO     | 
[2025-11-23 18:55:38] 2025-11-23 17:54:56,627 | INFO     | architecture information:
[2025-11-23 18:55:38] 2025-11-23 17:54:56,627 | INFO     | executing command: cat /etc/os-release
[2025-11-23 18:55:38] 2025-11-23 17:54:56,637 | INFO     | cat /etc/os-release:
[2025-11-23 18:55:38] NAME="CentOS Linux"
[2025-11-23 18:55:38] VERSION="7 (Core)"
[2025-11-23 18:55:38] ID="centos"
[2025-11-23 18:55:38] ID_LIKE="rhel fedora"
[2025-11-23 18:55:38] VERSION_ID="7"
[2025-11-23 18:55:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 18:55:38] ANSI_COLOR="0;31"
[2025-11-23 18:55:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 18:55:38] HOME_URL="https://www.centos.org/"
[2025-11-23 18:55:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 18:55:38] 
[2025-11-23 18:55:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 18:55:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 18:55:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 18:55:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 18:55:38] 
[2025-11-23 18:55:38] 2025-11-23 17:54:56,637 | INFO     | ***************************************
[2025-11-23 18:55:38] 2025-11-23 17:54:57,140 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | INFO     | sufficient remaining disk space (132576706560 B)
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | INFO     | update_server=False
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 18:55:38] 2025-11-23 17:54:57,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:55:38] 2025-11-23 17:54:57,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 18:55:38] 2025-11-23 17:54:57,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 18:55:38] 2025-11-23 17:54:57,182 | INFO     | all data control threads have been joined
[2025-11-23 18:55:38] 2025-11-23 17:54:57,518 | WARNING  | process 4145471 can no longer be monitored (due to stat problems) - aborting
[2025-11-23 18:55:38] 2025-11-23 17:54:57,543 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 18:55:38] 2025-11-23 17:54:57,575 | INFO     | number of running child processes to parent process 4145471: 1
[2025-11-23 18:55:38] 2025-11-23 17:54:57,575 | INFO     | maximum number of monitored processes: 8
[2025-11-23 18:55:38] 2025-11-23 17:54:57,575 | INFO     | aborting job monitoring since job object (job id=6892526223) has expired
[2025-11-23 18:55:38] 2025-11-23 17:54:57,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:55:38] 2025-11-23 17:54:57,575 | INFO     | will abort loop
[2025-11-23 18:55:38] 2025-11-23 17:54:57,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 18:55:38] 2025-11-23 17:54:58,155 | INFO     | [job] retrieve thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:58,156 | INFO     | [job] queue monitor thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:58,164 | INFO     | all payload control threads have been joined
[2025-11-23 18:55:38] 2025-11-23 17:54:58,174 | INFO     | [job] validate thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:58,187 | INFO     | [data] control thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:58,581 | INFO     | [job] job monitor thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:58,621 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:58,653 | INFO     | all job control threads have been joined
[2025-11-23 18:55:38] 2025-11-23 17:54:58,738 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:58,925 | INFO     | [payload] failed_post thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:59,148 | INFO     | [payload] validate_post thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:59,169 | INFO     | [payload] control thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:59,626 | INFO     | [data] copytool_in thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:59,627 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:59,654 | INFO     | [job] control thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:54:59,972 | INFO     | [data] copytool_out thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:55:00,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 18:55:38] 2025-11-23 17:55:04,513 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:55:07,765 | INFO     | job.realtimelogging is not enabled
[2025-11-23 18:55:38] 2025-11-23 17:55:08,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 18:55:38] 2025-11-23 17:55:31,497 | INFO     | [monitor] cgroup control has ended
[2025-11-23 18:55:38] 2025-11-23 17:55:33,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460675987264)>', '<ExcThread(monitor, started 140460043523840)>']
[2025-11-23 18:55:38] 2025-11-23 17:55:33,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 18:55:38] 2025-11-23 17:55:33,323 | INFO     | [monitor] control thread has ended
[2025-11-23 18:55:38] 2025-11-23 17:55:38,248 | INFO     | all workflow threads have been joined
[2025-11-23 18:55:38] 2025-11-23 17:55:38,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 18:55:38] 2025-11-23 17:55:38,248 | INFO     | traces error code: 0
[2025-11-23 18:55:38] 2025-11-23 17:55:38,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 18:55:38] 2025-11-23 17:55:38,288 [wrapper] ==== pilot stdout END ====
[2025-11-23 18:55:38] 2025-11-23 17:55:38,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 18:55:38] 2025-11-23 17:55:38,294 [wrapper] pilotpid: 4139042
[2025-11-23 18:55:38] 2025-11-23 17:55:38,296 [wrapper] Pilot exit status: 0
[2025-11-23 18:55:38] 2025-11-23 17:55:38,305 [wrapper] pandaids: 6892526223
[2025-11-23 18:55:38] 2025-11-23 17:55:38,318 [wrapper] cleanup supervisor_pilot   43251 4139043
[2025-11-23 18:55:38] 2025-11-23 17:55:38,321 [wrapper] Test setup, not cleaning
[2025-11-23 18:55:38] 2025-11-23 17:55:38,323 [wrapper] apfmon messages muted
[2025-11-23 18:55:38] 2025-11-23 17:55:38,326 [wrapper] ==== wrapper stdout END ====
[2025-11-23 18:55:38] 2025-11-23 17:55:38,328 [wrapper] ==== wrapper stderr END ====
[2025-11-23 18:55:38]  *** Error codes and diagnostics ***
[2025-11-23 18:55:38]     "exeErrorCode": 0,
[2025-11-23 18:55:38]     "exeErrorDiag": "",
[2025-11-23 18:55:38]     "pilotErrorCode": 0,
[2025-11-23 18:55:38]     "pilotErrorDiag": "",
[2025-11-23 18:55:38]  *** Listing of results directory ***
[2025-11-23 18:55:38] total 1309560
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:09 queuedata.json
[2025-11-23 18:55:38] -rwx------ 1 boinc boinc     36292 Nov 19 08:09 runpilot2-wrapper.sh
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc       100 Nov 23 06:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 18:55:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 06:06 run_atlas
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc       105 Nov 23 06:06 job.xml
[2025-11-23 18:55:38] -rw-r--r-- 2 boinc boinc 408861566 Nov 23 06:06 EVNT.47493027._000102.pool.root.1
[2025-11-23 18:55:38] drwxrwx--x 2 boinc boinc      4096 Nov 23 06:06 shared
[2025-11-23 18:55:38] -rw-r--r-- 2 boinc boinc    590090 Nov 23 06:06 input.tar.gz
[2025-11-23 18:55:38] -rw-r--r-- 2 boinc boinc     15120 Nov 23 06:06 start_atlas.sh
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc         0 Nov 23 06:06 boinc_setup_complete
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc      6206 Nov 23 06:06 init_data.xml
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc         0 Nov 23 06:06 boinc_lockfile
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc      2771 Nov 23 06:06 pandaJob.out
[2025-11-23 18:55:38] -rw------- 1 boinc boinc    989784 Nov 23 06:06 agis_schedconf.cvmfs.json
[2025-11-23 18:55:38] drwx------ 5 boinc boinc      4096 Nov 23 06:06 pilot3
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc       532 Nov 23 18:51 boinc_task_state.xml
[2025-11-23 18:55:38] -rw------- 1 boinc boinc 912797901 Nov 23 18:54 HITS.47493029._000972.pool.root.1
[2025-11-23 18:55:38] -rw------- 1 boinc boinc        95 Nov 23 18:54 pilot_heartbeat.json
[2025-11-23 18:55:38] -rw------- 1 boinc boinc      1035 Nov 23 18:54 memory_monitor_summary.json
[2025-11-23 18:55:38] -rw------- 1 boinc boinc   1526164 Nov 23 18:54 agis_ddmendpoints.agis.ALL.json
[2025-11-23 18:55:38] -rw------- 1 boinc boinc   1239241 Nov 23 18:54 log.47493029._000972.job.log.tgz.1
[2025-11-23 18:55:38] -rw------- 1 boinc boinc      8606 Nov 23 18:54 heartbeat.json
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc        28 Nov 23 18:55 wrapper_checkpoint.txt
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc      8192 Nov 23 18:55 boinc_mmap_file
[2025-11-23 18:55:38] -rw------- 1 boinc boinc      5152 Nov 23 18:55 pilotlog.txt
[2025-11-23 18:55:38] -rw------- 1 boinc boinc   6465309 Nov 23 18:55 log.47493029._000972.job.log.1
[2025-11-23 18:55:38] -rw------- 1 boinc boinc       353 Nov 23 18:55 output.list
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc       620 Nov 23 18:55 runtime_log
[2025-11-23 18:55:38] -rw------- 1 boinc boinc   7720960 Nov 23 18:55 result.tar.gz
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc      8783 Nov 23 18:55 runtime_log.err
[2025-11-23 18:55:38] -rw------- 1 boinc boinc       671 Nov 23 18:55 onaLDm4Urf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTuFKDmILisdn.diag
[2025-11-23 18:55:38] -rw-r--r-- 1 boinc boinc     21186 Nov 23 18:55 stderr.txt
[2025-11-23 18:55:38] HITS file was successfully produced:
[2025-11-23 18:55:38] -rw------- 1 boinc boinc 912797901 Nov 23 18:54 shared/HITS.pool.root.1
[2025-11-23 18:55:38]  *** Contents of shared directory: ***
[2025-11-23 18:55:38] total 1298832
[2025-11-23 18:55:38] -rw-r--r-- 2 boinc boinc 408861566 Nov 23 06:06 ATLAS.root_0
[2025-11-23 18:55:38] -rw-r--r-- 2 boinc boinc    590090 Nov 23 06:06 input.tar.gz
[2025-11-23 18:55:38] -rw-r--r-- 2 boinc boinc     15120 Nov 23 06:06 start_atlas.sh
[2025-11-23 18:55:38] -rw------- 1 boinc boinc 912797901 Nov 23 18:54 HITS.pool.root.1
[2025-11-23 18:55:38] -rw------- 1 boinc boinc   7720960 Nov 23 18:55 result.tar.gz
18:55:40 (4135342): run_atlas exited; CPU time 91507.919159
18:55:40 (4135342): called boinc_finish(0)

</stderr_txt>
]]>

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