Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:43:20 (2616986): wrapper (7.7.26015): starting
02:43:20 (2616986): wrapper: running run_atlas (--nthreads 12)
[2025-11-19 02:43:20] Arguments: --nthreads 12
[2025-11-19 02:43:20] Threads: 12
[2025-11-19 02:43:20] Checking for CVMFS
[2025-11-19 02:43:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 02:43:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 02:43:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 02:43:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 02:43:21] 2.11.5.0 2588556 17903 229396 153041 2 289 41985873 45568000 13716 130560 0 166162787 99.828 91482284 30224 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-19 02:43:21] CVMFS is ok
[2025-11-19 02:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 02:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 02:43:21] Further information can be found at the LHC@home message board.
[2025-11-19 02:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 02:43:21] Checking for apptainer binary...
[2025-11-19 02:43:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 02:43:21] Running /usr/bin/apptainer --version
[2025-11-19 02:43:21] apptainer version 1.4.1-1.el9
[2025-11-19 02:43:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 02:43:22] wns0052.triumf.lcg
[2025-11-19 02:43:22] apptainer works
[2025-11-19 02:43:22] Set ATHENA_PROC_NUMBER=12
[2025-11-19 02:43:22] Set ATHENA_CORE_NUMBER=12
[2025-11-19 02:43:22] Starting ATLAS job with PandaID=6892548574
[2025-11-19 02:43:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 02:49:52]  *** The last 200 lines of the pilot log: ***
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 02:49:52] 2025-11-19 10:49:12,951 | WARNING  | wrong length of table data, x=[1763549087.0, 1763549148.0, 1763549209.0], y=[1804.0, 910803.0, 254851.0] (must be same and length>=4)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | could have reported an average CPU frequency of 2065 MHz (4 samples)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | ..............................
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . Timing measurements:
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . get job = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . initial setup = 4 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . payload setup = 13 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . stage-in = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . payload execution = 141 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . stage-out = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | . log creation = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | ..............................
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892548574/pilotlog.txt
[2025-11-19 02:49:52] 2025-11-19 10:49:12,968 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-19 02:49:52] - Log from pilotlog.txt -
[2025-11-19 02:49:52] 2025-11-19 10:49:12,949 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892548574/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | INFO     | extracted standard info from prmon json
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 02:49:52] 2025-11-19 10:49:12,951 | WARNING  | wrong length of table data, x=[1763549087.0, 1763549148.0, 1763549209.0], y=[1804.0, 910803.0, 254851.0] (must be same and length>=4)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | could have reported an average CPU frequency of 2065 MHz (4 samples)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | ..............................
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . Timing measurements:
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . get job = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . initial setup = 4 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . payload setup = 13 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . stage-in = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . payload execution = 141 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . stage-out = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | . log creation = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | ..............................
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892548574/pilotlog.txt
[2025-11-19 02:49:52] 2025-11-19 10:49:12,968 | WARNING  | 
[2025-11-19 02:49:52] [begin log extracts]
[2025-11-19 02:49:52] - Log from pilotlog.txt -
[2025-11-19 02:49:52] 2025-11-19 10:49:12,949 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892548574/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | INFO     | extracted standard info from prmon json
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 02:49:52] 2025-11-19 10:49:12,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 02:49:52] 2025-11-19 10:49:12,951 | WARNING  | wrong length of table data, x=[1763549087.0, 1763549148.0, 1763549209.0], y=[1804.0, 910803.0, 254851.0] (must be same and length>=4)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | could have reported an average CPU frequency of 2065 MHz (4 samples)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | ..............................
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . Timing measurements:
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . get job = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . initial setup = 4 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . payload setup = 13 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . stage-in = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . payload execution = 141 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,952 | INFO     | . stage-out = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | . log creation = 0 s
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | ..............................
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 02:49:52] 2025-11-19 10:49:12,953 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892548574/pilotlog.txt
[2025-11-19 02:49:52] [end log extracts]
[2025-11-19 02:49:52] 2025-11-19 10:49:12,968 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-19 02:49:52] 2025-11-19 10:49:12,969 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-19 02:49:52] 2025-11-19 10:49:13,046 | INFO     | 
[2025-11-19 02:49:52] 2025-11-19 10:49:13,046 | INFO     | job summary report
[2025-11-19 02:49:52] 2025-11-19 10:49:13,046 | INFO     | --------------------------------------------------
[2025-11-19 02:49:52] 2025-11-19 10:49:13,046 | INFO     | PanDA job id: 6892548574
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | task id: 47493029
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-19 02:46:49,768 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | pilot state: failed 
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | transexitcode: 65
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | exeerrorcode: 65
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | exitcode: 65
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | cpuconsumptiontime: 56 s
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | nevents: 0
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | neventsw: 0
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | pid: 2627295
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | pgrp: 2627295
[2025-11-19 02:49:52] 2025-11-19 10:49:13,047 | INFO     | corecount: 12
[2025-11-19 02:49:52] 2025-11-19 10:49:13,048 | INFO     | event service: False
[2025-11-19 02:49:52] 2025-11-19 10:49:13,048 | INFO     | sizes: {0: 2296372, 1: 2297225, 2: 2297225, 12: 2297253, 14: 2297543, 23: 2297571, 159: 2323137, 160: 2323113, 161: 2327459, 294: 2327597}
[2025-11-19 02:49:52] 2025-11-19 10:49:13,048 | INFO     | --------------------------------------------------
[2025-11-19 02:49:52] 2025-11-19 10:49:13,048 | INFO     | 
[2025-11-19 02:49:52] 2025-11-19 10:49:13,048 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-19 02:49:52] 2025-11-19 10:49:13,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 02:49:52] 2025-11-19 10:49:13,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 02:49:52] 2025-11-19 10:49:13,070 | INFO     | job 6892548574 has completed (purged errors)
[2025-11-19 02:49:52] 2025-11-19 10:49:13,070 | INFO     | overall cleanup function is called
[2025-11-19 02:49:52] 2025-11-19 10:49:14,078 | INFO     | --- collectZombieJob: --- 10, [2627295]
[2025-11-19 02:49:52] 2025-11-19 10:49:14,079 | INFO     | zombie collector waiting for pid 2627295
[2025-11-19 02:49:52] 2025-11-19 10:49:14,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 02:49:52] 2025-11-19 10:49:14,079 | INFO     | collected zombie processes
[2025-11-19 02:49:52] 2025-11-19 10:49:14,079 | INFO     | will attempt to kill all subprocesses of pid=2627295
[2025-11-19 02:49:52] 2025-11-19 10:49:15,577 | INFO     | process IDs to be killed: [2627295] (in reverse order)
[2025-11-19 02:49:52] 2025-11-19 10:49:15,656 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 02:49:52] 2025-11-19 10:49:15,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 02:49:52] 2025-11-19 10:49:15,665 | INFO     | did not find any defunct processes belonging to 2627295
[2025-11-19 02:49:52] 2025-11-19 10:49:15,673 | INFO     | did not find any defunct processes belonging to 2627295
[2025-11-19 02:49:52] 2025-11-19 10:49:15,674 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 02:49:52] 2025-11-19 10:49:15,674 | INFO     | ready for new job
[2025-11-19 02:49:52] 2025-11-19 10:49:15,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 02:49:52] 2025-11-19 10:49:15,676 | INFO     | ***************************************
[2025-11-19 02:49:52] 2025-11-19 10:49:15,677 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 02:49:52] 2025-11-19 10:49:15,681 | INFO     | ***************************************
[2025-11-19 02:49:52] 2025-11-19 10:49:15,682 | INFO     | 
[2025-11-19 02:49:52] 2025-11-19 10:49:15,684 | INFO     | architecture information:
[2025-11-19 02:49:52] 2025-11-19 10:49:15,691 | INFO     | executing command: cat /etc/os-release
[2025-11-19 02:49:52] 2025-11-19 10:49:15,713 | INFO     | cat /etc/os-release:
[2025-11-19 02:49:52] NAME="CentOS Linux"
[2025-11-19 02:49:52] VERSION="7 (Core)"
[2025-11-19 02:49:52] ID="centos"
[2025-11-19 02:49:52] ID_LIKE="rhel fedora"
[2025-11-19 02:49:52] VERSION_ID="7"
[2025-11-19 02:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 02:49:52] ANSI_COLOR="0;31"
[2025-11-19 02:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 02:49:52] HOME_URL="https://www.centos.org/"
[2025-11-19 02:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 02:49:52] 
[2025-11-19 02:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 02:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 02:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 02:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 02:49:52] 
[2025-11-19 02:49:52] 2025-11-19 10:49:15,713 | INFO     | ***************************************
[2025-11-19 02:49:52] 2025-11-19 10:49:16,217 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-19 02:49:52] 2025-11-19 10:49:16,238 | INFO     | sufficient remaining disk space (1917840261120 B)
[2025-11-19 02:49:52] 2025-11-19 10:49:16,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 02:49:52] 2025-11-19 10:49:16,238 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 02:49:52] 2025-11-19 10:49:16,238 | INFO     | update_server=False
[2025-11-19 02:49:52] 2025-11-19 10:49:16,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 02:49:52] 2025-11-19 10:49:16,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 02:49:52] 2025-11-19 10:49:16,240 | INFO     | aborting loop
[2025-11-19 02:49:52] 2025-11-19 10:49:16,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 02:49:52] 2025-11-19 10:49:16,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 02:49:52] 2025-11-19 10:49:16,524 | INFO     | all payload control threads have been joined
[2025-11-19 02:49:52] 2025-11-19 10:49:17,187 | INFO     | all data control threads have been joined
[2025-11-19 02:49:52] 2025-11-19 10:49:17,245 | INFO     | [job] retrieve thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:17,245 | INFO     | [job] job monitor thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:17,530 | INFO     | [payload] control thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:17,579 | INFO     | all job control threads have been joined
[2025-11-19 02:49:52] 2025-11-19 10:49:17,596 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:17,631 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:17,819 | INFO     | [data] copytool_in thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:17,933 | INFO     | [payload] failed_post thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:17,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:18,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 02:49:52] 2025-11-19 10:49:18,193 | INFO     | [data] control thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:18,254 | INFO     | [data] copytool_out thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:18,398 | INFO     | [job] validate thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:18,585 | INFO     | [job] control thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:18,604 | INFO     | [payload] validate_post thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:18,714 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:19,075 | INFO     | [job] queue monitor thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:20,463 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 02:49:52] 2025-11-19 10:49:44,886 | INFO     | PID=2620678 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-19 02:49:52] 2025-11-19 10:49:44,886 | INFO     | .. there are 21 such processes running
[2025-11-19 02:49:52] 2025-11-19 10:49:44,886 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 02:49:52] 2025-11-19 10:49:44,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 02:49:52] 2025-11-19 10:49:44,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 02:49:52] 2025-11-19 10:49:47,004 | INFO     | [monitor] cgroup control has ended
[2025-11-19 02:49:52] 2025-11-19 10:49:47,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612207793984)>', '<ExcThread(monitor, started 140611818596096)>']
[2025-11-19 02:49:52] 2025-11-19 10:49:47,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 02:49:52] 2025-11-19 10:49:47,905 | INFO     | [monitor] control thread has ended
[2025-11-19 02:49:52] 2025-11-19 10:49:52,134 | INFO     | all workflow threads have been joined
[2025-11-19 02:49:52] 2025-11-19 10:49:52,135 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 02:49:52] 2025-11-19 10:49:52,135 | INFO     | traces error code: 0
[2025-11-19 02:49:52] 2025-11-19 10:49:52,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 02:49:52] 2025-11-19 10:49:52,345 [wrapper] ==== pilot stdout END ====
[2025-11-19 02:49:52] 2025-11-19 10:49:52,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 02:49:52] 2025-11-19 10:49:52,380 [wrapper] pilotpid: 2620678
[2025-11-19 02:49:52] 2025-11-19 10:49:52,383 [wrapper] Pilot exit status: 0
[2025-11-19 02:49:52] 2025-11-19 10:49:52,395 [wrapper] pandaids: 6892548574
[2025-11-19 02:49:52] 2025-11-19 10:49:52,444 [wrapper] cleanup supervisor_pilot 2620684 2620679
[2025-11-19 02:49:52] 2025-11-19 10:49:52,447 [wrapper] Test setup, not cleaning
[2025-11-19 02:49:52] 2025-11-19 10:49:52,449 [wrapper] apfmon messages muted
[2025-11-19 02:49:52] 2025-11-19 10:49:52,452 [wrapper] ==== wrapper stdout END ====
[2025-11-19 02:49:52] 2025-11-19 10:49:52,454 [wrapper] ==== wrapper stderr END ====
[2025-11-19 02:49:52]  *** Error codes and diagnostics ***
[2025-11-19 02:49:52]     "exeErrorCode": 65,
[2025-11-19 02:49:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-19 02:49:52]     "pilotErrorCode": 1305,
[2025-11-19 02:49:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-19 02:49:52]  *** Listing of results directory ***
[2025-11-19 02:49:52] total 402076
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc    576529 Nov 19 00:32 pilot3.tar.gz
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc      5112 Nov 19 00:39 queuedata.json
[2025-11-19 02:49:52] -rwx------. 1 boinc boinc     36292 Nov 19 00:41 runpilot2-wrapper.sh
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc       100 Nov 19 02:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 02:49:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 02:43 run_atlas
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc       105 Nov 19 02:43 job.xml
[2025-11-19 02:49:52] -rw-r--r--. 2 boinc boinc 407492638 Nov 19 02:43 EVNT.47493027._000333.pool.root.1
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc      6590 Nov 19 02:43 init_data.xml
[2025-11-19 02:49:52] -rw-r--r--. 2 boinc boinc     15120 Nov 19 02:43 start_atlas.sh
[2025-11-19 02:49:52] drwxrwx--x. 2 boinc boinc      4096 Nov 19 02:43 shared
[2025-11-19 02:49:52] -rw-r--r--. 2 boinc boinc    590100 Nov 19 02:43 input.tar.gz
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc         0 Nov 19 02:43 boinc_lockfile
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc      2773 Nov 19 02:43 pandaJob.out
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc    989442 Nov 19 02:43 agis_schedconf.cvmfs.json
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc   1525063 Nov 19 02:43 agis_ddmendpoints.agis.ALL.json
[2025-11-19 02:49:52] drwx------. 5 boinc boinc      4096 Nov 19 02:43 pilot3
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc       524 Nov 19 02:45 boinc_task_state.xml
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc      1012 Nov 19 02:46 memory_monitor_summary.json
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc     50117 Nov 19 02:46 log.47493029._003289.job.log.tgz.1
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc        95 Nov 19 02:48 pilot_heartbeat.json
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc     10341 Nov 19 02:49 heartbeat.json
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc        23 Nov 19 02:49 wrapper_checkpoint.txt
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc      8192 Nov 19 02:49 boinc_mmap_file
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc      4823 Nov 19 02:49 pilotlog.txt
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc    107346 Nov 19 02:49 log.47493029._003289.job.log.1
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc       186 Nov 19 02:49 output.list
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc       620 Nov 19 02:49 runtime_log
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc    174080 Nov 19 02:49 result.tar.gz
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc      8528 Nov 19 02:49 runtime_log.err
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc       645 Nov 19 02:49 EX3LDm9vsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmy4GKDmGAaUin.diag
[2025-11-19 02:49:52] -rw-r--r--. 1 boinc boinc     21868 Nov 19 02:49 stderr.txt
[2025-11-19 02:49:52] No HITS result produced
[2025-11-19 02:49:52]  *** Contents of shared directory: ***
[2025-11-19 02:49:52] total 398716
[2025-11-19 02:49:52] -rw-r--r--. 2 boinc boinc 407492638 Nov 19 02:43 ATLAS.root_0
[2025-11-19 02:49:52] -rw-r--r--. 2 boinc boinc     15120 Nov 19 02:43 start_atlas.sh
[2025-11-19 02:49:52] -rw-r--r--. 2 boinc boinc    590100 Nov 19 02:43 input.tar.gz
[2025-11-19 02:49:52] -rw-------. 1 boinc boinc    174080 Nov 19 02:49 result.tar.gz
02:49:54 (2616986): run_atlas exited; CPU time 57.671735
02:49:54 (2616986): called boinc_finish(0)

</stderr_txt>
]]>

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