Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:36:53 (20078): wrapper (7.7.26015): starting
14:36:53 (20078): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 14:36:53] Arguments: --nthreads 8
[2025-11-22 14:36:53] Threads: 8
[2025-11-22 14:36:53] Checking for CVMFS
[2025-11-22 14:36:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 14:36:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 14:36:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 14:36:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 14:36:56] 2.11.2.0 6805 279513 144504 153173 0 84 22824656 25165824 4632 130560 30 119472357 99.859 77351619 3126 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 14:36:56] CVMFS is ok
[2025-11-22 14:36:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 14:36:56] Checking for apptainer binary...
[2025-11-22 14:36:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 14:36:56] Running /usr/bin/apptainer --version
[2025-11-22 14:36:56] apptainer version 1.3.2-1.el7
[2025-11-22 14:36:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 14:37:21] cg-vwn251.simple-grid.lan
[2025-11-22 14:37:21] apptainer works
[2025-11-22 14:37:21] Set ATHENA_PROC_NUMBER=8
[2025-11-22 14:37:21] Set ATHENA_CORE_NUMBER=8
[2025-11-22 14:37:21] Starting ATLAS job with PandaID=6892523263
[2025-11-22 14:37:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:57:15]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:57:15] 2025-11-23 15:56:27,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:57:15] 2025-11-23 15:56:28,469 | INFO     | time since job start (94508s) is within the limit (172800.0s)
[2025-11-23 16:57:15] 2025-11-23 15:56:29,875 | INFO     | monitor loop #6391: job 0:6892523263 is in state 'finished'
[2025-11-23 16:57:15] 2025-11-23 15:56:29,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:57:15] 2025-11-23 15:56:30,480 | INFO     | time since job start (94510s) is within the limit (172800.0s)
[2025-11-23 16:57:15] 2025-11-23 15:56:32,380 | INFO     | monitor loop #6392: job 0:6892523263 is in state 'finished'
[2025-11-23 16:57:15] 2025-11-23 15:56:32,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:57:15] 2025-11-23 15:56:32,492 | INFO     | time since job start (94512s) is within the limit (172800.0s)
[2025-11-23 16:57:15] 2025-11-23 15:56:34,500 | INFO     | time since job start (94514s) is within the limit (172800.0s)
[2025-11-23 16:57:15] 2025-11-23 15:56:34,885 | INFO     | monitor loop #6393: job 0:6892523263 is in state 'finished'
[2025-11-23 16:57:15] 2025-11-23 15:56:34,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:57:15] 2025-11-23 15:56:36,511 | INFO     | time since job start (94516s) is within the limit (172800.0s)
[2025-11-23 16:57:15] 2025-11-23 15:56:37,390 | INFO     | monitor loop #6394: job 0:6892523263 is in state 'finished'
[2025-11-23 16:57:15] 2025-11-23 15:56:37,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:57:15] 2025-11-23 15:56:37,768 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 16:57:15] 2025-11-23 15:56:37,769 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 16:57:15] 2025-11-23 15:56:37,771 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6892523263/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 16:57:15] 2025-11-23 15:56:37,772 | INFO     | extracted standard info from prmon json
[2025-11-23 16:57:15] 2025-11-23 15:56:37,772 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 16:57:15] 2025-11-23 15:56:37,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 16:57:15] 2025-11-23 15:56:37,801 | INFO     | fitting pss+swap vs Time
[2025-11-23 16:57:15] 2025-11-23 15:56:37,805 | INFO     | sum of square deviations: 1130305373757.64
[2025-11-23 16:57:15] 2025-11-23 15:56:37,878 | INFO     | sum of deviations: 4804653635188.152
[2025-11-23 16:57:15] 2025-11-23 15:56:37,879 | INFO     | mean x: 1763866327.4009097
[2025-11-23 16:57:15] 2025-11-23 15:56:37,879 | INFO     | mean y: 2838185.0272904485
[2025-11-23 16:57:15] 2025-11-23 15:56:37,879 | INFO     | intersect: -7494929195.975992
[2025-11-23 16:57:15] 2025-11-23 15:56:37,881 | INFO     | chi2: 25.46943814617653
[2025-11-23 16:57:15] 2025-11-23 15:56:37,883 | INFO     | sum of square deviations: 1119325202185.294
[2025-11-23 16:57:15] 2025-11-23 15:56:37,946 | INFO     | sum of deviations: 5307490945451.057
[2025-11-23 16:57:15] 2025-11-23 15:56:37,946 | INFO     | mean x: 1763866174.9054759
[2025-11-23 16:57:15] 2025-11-23 15:56:37,946 | INFO     | mean y: 2845167.7314211214
[2025-11-23 16:57:15] 2025-11-23 15:56:37,946 | INFO     | intersect: -8360858011.66725
[2025-11-23 16:57:15] 2025-11-23 15:56:37,948 | INFO     | chi2: 22.37337913533041
[2025-11-23 16:57:15] 2025-11-23 15:56:37,949 | INFO     | current chi2=22.37337913533041 (change=12.155976873447047 %)
[2025-11-23 16:57:15] 2025-11-23 15:56:37,949 | INFO     | right removable region: 1533
[2025-11-23 16:57:15] 2025-11-23 15:56:37,951 | INFO     | sum of square deviations: 1119323887025.2954
[2025-11-23 16:57:15] 2025-11-23 15:56:38,088 | INFO     | sum of deviations: 4146848330482.6064
[2025-11-23 16:57:15] 2025-11-23 15:56:38,089 | INFO     | mean x: 1763866479.9054759
[2025-11-23 16:57:15] 2025-11-23 15:56:38,089 | INFO     | mean y: 2847320.0110821384
[2025-11-23 16:57:15] 2025-11-23 15:56:38,089 | INFO     | intersect: -6531889276.05064
[2025-11-23 16:57:15] 2025-11-23 15:56:38,095 | INFO     | chi2: 20.47172619336904
[2025-11-23 16:57:15] 2025-11-23 15:56:38,096 | INFO     | current chi2=20.47172619336904 (change=19.62238791497544 %)
[2025-11-23 16:57:15] 2025-11-23 15:56:38,096 | INFO     | left removable region: 10
[2025-11-23 16:57:15] 2025-11-23 15:56:38,102 | INFO     | sum of square deviations: 1095417019573.9069
[2025-11-23 16:57:15] 2025-11-23 15:56:38,206 | INFO     | sum of deviations: 4190478290112.6245
[2025-11-23 16:57:15] 2025-11-23 15:56:38,206 | INFO     | mean x: 1763866449.415627
[2025-11-23 16:57:15] 2025-11-23 15:56:38,206 | INFO     | mean y: 2863929.7130663167
[2025-11-23 16:57:15] 2025-11-23 15:56:38,206 | INFO     | intersect: -6744743539.275622
[2025-11-23 16:57:15] 2025-11-23 15:56:38,208 | INFO     | chi2: 12.966715849907198
[2025-11-23 16:57:15] 2025-11-23 15:56:38,209 | INFO     | current memory leak: 3.83 B/s (using 1523 data points, chi2=12.97)
[2025-11-23 16:57:15] 2025-11-23 15:56:38,211 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | ..............................
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . Timing measurements:
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . get job = 0 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . initial setup = 8 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . payload setup = 174 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . stage-in = 0 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . payload execution = 94032 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . stage-out = 8 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | . log creation = 2 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,212 | INFO     | ..............................
[2025-11-23 16:57:15] 2025-11-23 15:56:38,469 | INFO     | 
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | job summary report
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | --------------------------------------------------
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | PanDA job id: 6892523263
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | task id: 47493029
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | errors: (none)
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | pilot state: finished 
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | transexitcode: 0
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | exeerrorcode: 0
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | exeerrordiag: 
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | exitcode: 0
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | exitmsg: OK
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | cpuconsumptiontime: 338735 s
[2025-11-23 16:57:15] 2025-11-23 15:56:38,470 | INFO     | nevents: 1000
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | neventsw: 0
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | pid: 30438
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | pgrp: 30438
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | corecount: 8
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | event service: False
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | sizes: {0: 2297964, 1: 2298649, 2: 2298848, 13: 2298848, 24: 2298904, 34: 2298932, 45: 2299088, 56: 2299116, 66: 2299144, 77: 2299172, 88: 2299228, 99: 2299536, 10
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | --------------------------------------------------
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | 
[2025-11-23 16:57:15] 2025-11-23 15:56:38,471 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-23 16:57:15] 2025-11-23 15:56:38,520 | INFO     | time since job start (94518s) is within the limit (172800.0s)
[2025-11-23 16:57:15] 2025-11-23 15:56:39,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,047 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,047 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,047 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 16:57:15] 2025-11-23 15:56:39,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 16:57:15] 2025-11-23 15:56:39,049 | INFO     | job 6892523263 has completed (purged errors)
[2025-11-23 16:57:15] 2025-11-23 15:56:39,049 | INFO     | overall cleanup function is called
[2025-11-23 16:57:15] 2025-11-23 15:56:40,075 | INFO     | --- collectZombieJob: --- 10, [30438]
[2025-11-23 16:57:15] 2025-11-23 15:56:40,076 | INFO     | zombie collector waiting for pid 30438
[2025-11-23 16:57:15] 2025-11-23 15:56:40,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 16:57:15] 2025-11-23 15:56:40,076 | INFO     | collected zombie processes
[2025-11-23 16:57:15] 2025-11-23 15:56:40,076 | INFO     | will attempt to kill all subprocesses of pid=30438
[2025-11-23 16:57:15] 2025-11-23 15:56:40,205 | INFO     | process IDs to be killed: [30438] (in reverse order)
[2025-11-23 16:57:15] 2025-11-23 15:56:40,911 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 16:57:15] 2025-11-23 15:56:40,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 16:57:15] 2025-11-23 15:56:40,915 | INFO     | did not find any defunct processes belonging to 30438
[2025-11-23 16:57:15] 2025-11-23 15:56:40,919 | INFO     | did not find any defunct processes belonging to 30438
[2025-11-23 16:57:15] 2025-11-23 15:56:40,970 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 16:57:15] 2025-11-23 15:56:40,970 | INFO     | ready for new job
[2025-11-23 16:57:15] 2025-11-23 15:56:40,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 16:57:15] 2025-11-23 15:56:40,977 | INFO     | ***************************************
[2025-11-23 16:57:15] 2025-11-23 15:56:40,977 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 16:57:15] 2025-11-23 15:56:40,977 | INFO     | ***************************************
[2025-11-23 16:57:15] 2025-11-23 15:56:40,981 | INFO     | 
[2025-11-23 16:57:15] 2025-11-23 15:56:40,982 | INFO     | pilot is running in a VM
[2025-11-23 16:57:15] 2025-11-23 15:56:40,982 | INFO     | architecture information:
[2025-11-23 16:57:15] 2025-11-23 15:56:40,992 | INFO     | executing command: cat /etc/os-release
[2025-11-23 16:57:15] 2025-11-23 15:56:41,075 | INFO     | cat /etc/os-release:
[2025-11-23 16:57:15] NAME="CentOS Linux"
[2025-11-23 16:57:15] VERSION="7 (Core)"
[2025-11-23 16:57:15] ID="centos"
[2025-11-23 16:57:15] ID_LIKE="rhel fedora"
[2025-11-23 16:57:15] VERSION_ID="7"
[2025-11-23 16:57:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 16:57:15] ANSI_COLOR="0;31"
[2025-11-23 16:57:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 16:57:15] HOME_URL="https://www.centos.org/"
[2025-11-23 16:57:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 16:57:15] 
[2025-11-23 16:57:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 16:57:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 16:57:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 16:57:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 16:57:15] 
[2025-11-23 16:57:15] 2025-11-23 15:56:41,075 | INFO     | ***************************************
[2025-11-23 16:57:15] 2025-11-23 15:56:41,579 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-23 16:57:15] 2025-11-23 15:56:41,783 | INFO     | sufficient remaining disk space (493842595840 B)
[2025-11-23 16:57:15] 2025-11-23 15:56:41,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 16:57:15] 2025-11-23 15:56:41,784 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 16:57:15] 2025-11-23 15:56:41,784 | INFO     | update_server=False
[2025-11-23 16:57:15] 2025-11-23 15:56:41,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 16:57:15] 2025-11-23 15:56:41,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:57:15] 2025-11-23 15:56:41,784 | INFO     | aborting loop
[2025-11-23 16:57:15] 2025-11-23 15:56:41,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 16:57:15] 2025-11-23 15:56:42,520 | INFO     | all payload control threads have been joined
[2025-11-23 16:57:15] 2025-11-23 15:56:42,695 | INFO     | all data control threads have been joined
[2025-11-23 16:57:15] 2025-11-23 15:56:42,790 | INFO     | [job] retrieve thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:42,790 | INFO     | [job] job monitor thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:42,837 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:42,860 | INFO     | [payload] failed_post thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,283 | INFO     | [job] validate thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,355 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:57:15] 2025-11-23 15:56:43,403 | INFO     | all job control threads have been joined
[2025-11-23 16:57:15] 2025-11-23 15:56:43,527 | INFO     | [payload] control thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,701 | INFO     | [data] control thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,847 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,970 | INFO     | [data] copytool_in thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:43,977 | INFO     | [payload] validate_post thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:44,086 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:44,384 | INFO     | [job] queue monitor thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:44,409 | INFO     | [job] control thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:56:44,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:57:15] 2025-11-23 15:56:48,629 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:57:15] 2025-11-23 15:57:05,733 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:57:15] 2025-11-23 15:57:07,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302982715200)>', '<ExcThread(monitor, started 140302530627328)>']
[2025-11-23 16:57:15] 2025-11-23 15:57:09,411 [wrapper] supervise_pilot (15 min periods counter: 106)
[2025-11-23 16:57:15] 2025-11-23 15:57:11,705 | INFO     | PID=23873 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 16:57:15] 2025-11-23 15:57:11,705 | INFO     | .. there are 9 such processes running
[2025-11-23 16:57:15] 2025-11-23 15:57:11,707 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:57:15] 2025-11-23 15:57:11,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:57:15] 2025-11-23 15:57:11,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:57:15] 2025-11-23 15:57:11,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:57:15] 2025-11-23 15:57:11,707 | INFO     | [monitor] control thread has ended
[2025-11-23 16:57:15] 2025-11-23 15:57:12,122 | INFO     | all workflow threads have been joined
[2025-11-23 16:57:15] 2025-11-23 15:57:12,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:57:15] 2025-11-23 15:57:12,123 | INFO     | traces error code: 0
[2025-11-23 16:57:15] 2025-11-23 15:57:12,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:57:15] 2025-11-23 15:57:12,560 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:57:15] 2025-11-23 15:57:12,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:57:15] 2025-11-23 15:57:12,781 [wrapper] pilotpid: 23873
[2025-11-23 16:57:15] 2025-11-23 15:57:12,849 [wrapper] Pilot exit status: 0
[2025-11-23 16:57:15] 2025-11-23 15:57:13,133 [wrapper] pandaids: 6892523263
[2025-11-23 16:57:15] 2025-11-23 15:57:13,844 [wrapper] cleanup supervisor_pilot 32043 23874
[2025-11-23 16:57:15] 2025-11-23 15:57:13,922 [wrapper] Test setup, not cleaning
[2025-11-23 16:57:15] 2025-11-23 15:57:14,035 [wrapper] apfmon messages muted
[2025-11-23 16:57:15] 2025-11-23 15:57:14,157 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:57:15] 2025-11-23 15:57:14,226 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:57:15]  *** Error codes and diagnostics ***
[2025-11-23 16:57:15]     "exeErrorCode": 0,
[2025-11-23 16:57:15]     "exeErrorDiag": "",
[2025-11-23 16:57:15]     "pilotErrorCode": 0,
[2025-11-23 16:57:15]     "pilotErrorDiag": "",
[2025-11-23 16:57:15]  *** Listing of results directory ***
[2025-11-23 16:57:15] total 1319260
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-23 16:57:15] -rwx------. 1 boinc boinc     36292 Nov 19 08:06 runpilot2-wrapper.sh
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc      5112 Nov 19 08:07 queuedata.json
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc       100 Nov 22 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:57:15] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 14:36 run_atlas
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc       105 Nov 22 14:36 job.xml
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc      6390 Nov 22 14:36 init_data.xml
[2025-11-23 16:57:15] -rw-r--r--. 2 boinc boinc 409566721 Nov 22 14:36 EVNT.47493027._000070.pool.root.1
[2025-11-23 16:57:15] -rw-r--r--. 2 boinc boinc     15120 Nov 22 14:36 start_atlas.sh
[2025-11-23 16:57:15] drwxrwx--x. 2 boinc boinc        68 Nov 22 14:36 shared
[2025-11-23 16:57:15] -rw-r--r--. 2 boinc boinc    590095 Nov 22 14:36 input.tar.gz
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc         0 Nov 22 14:36 boinc_lockfile
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc      2771 Nov 22 14:37 pandaJob.out
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc    989768 Nov 22 14:41 agis_schedconf.cvmfs.json
[2025-11-23 16:57:15] drwx------. 5 boinc boinc      4096 Nov 22 14:41 pilot3
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc       533 Nov 23 16:30 boinc_task_state.xml
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc 906906349 Nov 23 16:53 HITS.47493029._000656.pool.root.1
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc      1029 Nov 23 16:54 memory_monitor_summary.json
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc   1526164 Nov 23 16:54 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc   2607331 Nov 23 16:55 log.47493029._000656.job.log.tgz.1
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc      7952 Nov 23 16:56 heartbeat.json
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc      8192 Nov 23 16:57 boinc_mmap_file
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc        29 Nov 23 16:57 wrapper_checkpoint.txt
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc        95 Nov 23 16:57 pilot_heartbeat.json
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc      4884 Nov 23 16:57 pilotlog.txt
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc  12665502 Nov 23 16:57 log.47493029._000656.job.log.1
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc       353 Nov 23 16:57 output.list
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc       620 Nov 23 16:57 runtime_log
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc  15288320 Nov 23 16:57 result.tar.gz
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc      8703 Nov 23 16:57 runtime_log.err
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc       662 Nov 23 16:57 KNkKDmLSrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2eGKDm3nTVWn.diag
[2025-11-23 16:57:15] -rw-r--r--. 1 boinc boinc     21422 Nov 23 16:57 stderr.txt
[2025-11-23 16:57:15] HITS file was successfully produced:
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc 906906349 Nov 23 16:53 shared/HITS.pool.root.1
[2025-11-23 16:57:15]  *** Contents of shared directory: ***
[2025-11-23 16:57:15] total 1301148
[2025-11-23 16:57:15] -rw-r--r--. 2 boinc boinc 409566721 Nov 22 14:36 ATLAS.root_0
[2025-11-23 16:57:15] -rw-r--r--. 2 boinc boinc     15120 Nov 22 14:36 start_atlas.sh
[2025-11-23 16:57:15] -rw-r--r--. 2 boinc boinc    590095 Nov 22 14:36 input.tar.gz
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc 906906349 Nov 23 16:53 HITS.pool.root.1
[2025-11-23 16:57:15] -rw-------. 1 boinc boinc  15288320 Nov 23 16:57 result.tar.gz
16:57:17 (20078): run_atlas exited; CPU time 339266.080369
16:57:17 (20078): called boinc_finish(0)

</stderr_txt>
]]>

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