Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:49:08 (845004): wrapper (7.7.26015): starting
17:49:08 (845004): wrapper: running run_atlas (--nthreads 9)
[2025-11-19 17:49:08] Arguments: --nthreads 9
[2025-11-19 17:49:08] Threads: 9
[2025-11-19 17:49:08] Checking for CVMFS
[2025-11-19 17:49:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 17:49:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 17:49:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 17:49:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 17:49:10] 2.13.2.0 10197 24269 205560 153059 3 340 26704213 40960000 8878 16776704 0 12768857 99.748 6529439 29645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 17:49:10] CVMFS is ok
[2025-11-19 17:49:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 17:49:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 17:49:10] Further information can be found at the LHC@home message board.
[2025-11-19 17:49:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 17:49:10] Checking for apptainer binary...
[2025-11-19 17:49:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 17:49:10] Running /usr/bin/apptainer --version
[2025-11-19 17:49:10] apptainer version 1.4.4-1.el9
[2025-11-19 17:49:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 17:49:11] c-211-12.aglt2.org
[2025-11-19 17:49:11] apptainer works
[2025-11-19 17:49:11] Set ATHENA_PROC_NUMBER=9
[2025-11-19 17:49:11] Set ATHENA_CORE_NUMBER=9
[2025-11-19 17:49:11] Starting ATLAS job with PandaID=6891594305
[2025-11-19 17:49:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 12:04:59]  *** The last 200 lines of the pilot log: ***
[2025-11-20 12:04:59] 2025-11-20 17:04:24,737 | INFO     | sum of deviations: 2846476723571.595
[2025-11-20 12:04:59] 2025-11-20 17:04:24,737 | INFO     | mean x: 1763625444.8931227
[2025-11-20 12:04:59] 2025-11-20 17:04:24,740 | INFO     | mean y: 3093215.405204461
[2025-11-20 12:04:59] 2025-11-20 17:04:24,740 | INFO     | intersect: -12992176355.006989
[2025-11-20 12:04:59] 2025-11-20 17:04:24,744 | INFO     | chi2: 11.035468012190394
[2025-11-20 12:04:59] 2025-11-20 17:04:24,748 | INFO     | sum of square deviations: 380943888828.9597
[2025-11-20 12:04:59] 2025-11-20 17:04:24,810 | INFO     | sum of deviations: 3241040895687.676
[2025-11-20 12:04:59] 2025-11-20 17:04:24,811 | INFO     | mean x: 1763625292.3996265
[2025-11-20 12:04:59] 2025-11-20 17:04:24,811 | INFO     | mean y: 3104440.680672269
[2025-11-20 12:04:59] 2025-11-20 17:04:24,811 | INFO     | intersect: -15001681998.88536
[2025-11-20 12:04:59] 2025-11-20 17:04:24,815 | INFO     | chi2: 7.698028733813374
[2025-11-20 12:04:59] 2025-11-20 17:04:24,817 | INFO     | current chi2=7.698028733813374 (change=30.242843119025835 %)
[2025-11-20 12:04:59] 2025-11-20 17:04:24,818 | INFO     | sum of square deviations: 375634041796.61896
[2025-11-20 12:04:59] 2025-11-20 17:04:24,877 | INFO     | sum of deviations: 3621145410246.1675
[2025-11-20 12:04:59] 2025-11-20 17:04:24,877 | INFO     | mean x: 1763625139.9061913
[2025-11-20 12:04:59] 2025-11-20 17:04:24,877 | INFO     | mean y: 3115353.6116322703
[2025-11-20 12:04:59] 2025-11-20 17:04:24,877 | INFO     | intersect: -16998387093.346684
[2025-11-20 12:04:59] 2025-11-20 17:04:24,879 | INFO     | chi2: 4.551936503897563
[2025-11-20 12:04:59] 2025-11-20 17:04:24,879 | INFO     | current chi2=4.551936503897563 (change=40.86880341322565 %)
[2025-11-20 12:04:59] 2025-11-20 17:04:24,882 | INFO     | sum of square deviations: 370373712309.0108
[2025-11-20 12:04:59] 2025-11-20 17:04:24,928 | INFO     | sum of deviations: 3750679129789.112
[2025-11-20 12:04:59] 2025-11-20 17:04:24,929 | INFO     | mean x: 1763624987.4118755
[2025-11-20 12:04:59] 2025-11-20 17:04:24,930 | INFO     | mean y: 3119106.0226201694
[2025-11-20 12:04:59] 2025-11-20 17:04:24,930 | INFO     | intersect: -17856656610.298855
[2025-11-20 12:04:59] 2025-11-20 17:04:24,931 | INFO     | chi2: 4.003453348659422
[2025-11-20 12:04:59] 2025-11-20 17:04:24,932 | INFO     | current chi2=4.003453348659422 (change=12.049446532668167 %)
[2025-11-20 12:04:59] 2025-11-20 17:04:24,933 | INFO     | right removable region: 1060
[2025-11-20 12:04:59] 2025-11-20 17:04:24,934 | INFO     | sum of square deviations: 380942974438.9599
[2025-11-20 12:04:59] 2025-11-20 17:04:24,977 | INFO     | sum of deviations: 2436554561199.0605
[2025-11-20 12:04:59] 2025-11-20 17:04:24,978 | INFO     | mean x: 1763625597.3996265
[2025-11-20 12:04:59] 2025-11-20 17:04:24,978 | INFO     | mean y: 3104872.661064426
[2025-11-20 12:04:59] 2025-11-20 17:04:24,978 | INFO     | intersect: -11277244896.015486
[2025-11-20 12:04:59] 2025-11-20 17:04:24,984 | INFO     | chi2: 7.835790016293508
[2025-11-20 12:04:59] 2025-11-20 17:04:24,984 | INFO     | current chi2=7.835790016293508 (change=28.99449295999357 %)
[2025-11-20 12:04:59] 2025-11-20 17:04:24,986 | INFO     | sum of square deviations: 375632474103.8531
[2025-11-20 12:04:59] 2025-11-20 17:04:25,078 | INFO     | sum of deviations: 2311721098784.6855
[2025-11-20 12:04:59] 2025-11-20 17:04:25,079 | INFO     | mean x: 1763625749.902439
[2025-11-20 12:04:59] 2025-11-20 17:04:25,079 | INFO     | mean y: 3108453.1988742966
[2025-11-20 12:04:59] 2025-11-20 17:04:25,079 | INFO     | intersect: -10850614633.805151
[2025-11-20 12:04:59] 2025-11-20 17:04:25,081 | INFO     | chi2: 7.5527651102497115
[2025-11-20 12:04:59] 2025-11-20 17:04:25,081 | INFO     | current chi2=7.5527651102497115 (change=3.6119511300747345 %)
[2025-11-20 12:04:59] 2025-11-20 17:04:25,081 | INFO     | left removable region: 20
[2025-11-20 12:04:59] 2025-11-20 17:04:25,087 | INFO     | sum of square deviations: 348813971904.99896
[2025-11-20 12:04:59] 2025-11-20 17:04:25,222 | INFO     | sum of deviations: 3076294868187.989
[2025-11-20 12:04:59] 2025-11-20 17:04:25,222 | INFO     | mean x: 1763625566.9240384
[2025-11-20 12:04:59] 2025-11-20 17:04:25,222 | INFO     | mean y: 3139339.5442307694
[2025-11-20 12:04:59] 2025-11-20 17:04:25,223 | INFO     | intersect: -15550802640.770687
[2025-11-20 12:04:59] 2025-11-20 17:04:25,224 | INFO     | chi2: 0.4099221704770498
[2025-11-20 12:04:59] 2025-11-20 17:04:25,225 | INFO     | current memory leak: 8.82 B/s (using 1040 data points, chi2=0.41)
[2025-11-20 12:04:59] 2025-11-20 17:04:25,230 | INFO     | could have reported an average CPU frequency of 2564 MHz (39 samples)
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | ..............................
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | . Timing measurements:
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | . get job = 0 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | . initial setup = 3 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | . payload setup = 19 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | . stage-in = 0 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | . payload execution = 65598 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,231 | INFO     | . stage-out = 6 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,232 | INFO     | . log creation = 1 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,232 | INFO     | ..............................
[2025-11-20 12:04:59] 2025-11-20 17:04:25,606 | INFO     | 
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | job summary report
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | --------------------------------------------------
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | PanDA job id: 6891594305
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | task id: 47493068
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | errors: (none)
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | pilot state: finished 
[2025-11-20 12:04:59] 2025-11-20 17:04:25,607 | INFO     | transexitcode: 0
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | exeerrorcode: 0
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | exeerrordiag: 
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | exitcode: 0
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | exitmsg: OK
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | cpuconsumptiontime: 338721 s
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | nevents: 1000
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | neventsw: 0
[2025-11-20 12:04:59] 2025-11-20 17:04:25,608 | INFO     | pid: 860214
[2025-11-20 12:04:59] 2025-11-20 17:04:25,609 | INFO     | pgrp: 860214
[2025-11-20 12:04:59] 2025-11-20 17:04:25,609 | INFO     | corecount: 9
[2025-11-20 12:04:59] 2025-11-20 17:04:25,609 | INFO     | event service: False
[2025-11-20 12:04:59] 2025-11-20 17:04:25,609 | INFO     | sizes: {0: 2296972, 1: 2297056, 2: 2297255, 13: 2297255, 14: 2297573, 24: 2297601, 65622: 2353751, 65629: 2364341, 65632: 2364397, 65645: 2364643}
[2025-11-20 12:04:59] 2025-11-20 17:04:25,609 | INFO     | --------------------------------------------------
[2025-11-20 12:04:59] 2025-11-20 17:04:25,609 | INFO     | 
[2025-11-20 12:04:59] 2025-11-20 17:04:25,613 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-20 12:04:59] 2025-11-20 17:04:25,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,665 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,665 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,666 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,666 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,666 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,667 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,667 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,667 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,667 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,667 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 12:04:59] 2025-11-20 17:04:25,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 12:04:59] 2025-11-20 17:04:25,673 | INFO     | job 6891594305 has completed (purged errors)
[2025-11-20 12:04:59] 2025-11-20 17:04:25,674 | INFO     | overall cleanup function is called
[2025-11-20 12:04:59] 2025-11-20 17:04:26,241 | INFO     | PID=849022 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 12:04:59] 2025-11-20 17:04:26,267 | INFO     | .. there are 10 such processes running
[2025-11-20 12:04:59] 2025-11-20 17:04:26,728 | INFO     | --- collectZombieJob: --- 10, [860214]
[2025-11-20 12:04:59] 2025-11-20 17:04:26,729 | INFO     | zombie collector waiting for pid 860214
[2025-11-20 12:04:59] 2025-11-20 17:04:26,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 12:04:59] 2025-11-20 17:04:26,730 | INFO     | collected zombie processes
[2025-11-20 12:04:59] 2025-11-20 17:04:26,730 | INFO     | will attempt to kill all subprocesses of pid=860214
[2025-11-20 12:04:59] 2025-11-20 17:04:27,183 | INFO     | process IDs to be killed: [860214] (in reverse order)
[2025-11-20 12:04:59] 2025-11-20 17:04:27,333 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 12:04:59] 2025-11-20 17:04:27,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 12:04:59] 2025-11-20 17:04:27,344 | INFO     | did not find any defunct processes belonging to 860214
[2025-11-20 12:04:59] 2025-11-20 17:04:27,356 | INFO     | did not find any defunct processes belonging to 860214
[2025-11-20 12:04:59] 2025-11-20 17:04:27,358 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 12:04:59] 2025-11-20 17:04:27,358 | INFO     | ready for new job
[2025-11-20 12:04:59] 2025-11-20 17:04:27,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 12:04:59] 2025-11-20 17:04:27,369 | INFO     | ***************************************
[2025-11-20 12:04:59] 2025-11-20 17:04:27,369 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 12:04:59] 2025-11-20 17:04:27,369 | INFO     | ***************************************
[2025-11-20 12:04:59] 2025-11-20 17:04:27,369 | INFO     | 
[2025-11-20 12:04:59] 2025-11-20 17:04:27,372 | INFO     | architecture information:
[2025-11-20 12:04:59] 2025-11-20 17:04:27,374 | INFO     | executing command: cat /etc/os-release
[2025-11-20 12:04:59] 2025-11-20 17:04:27,413 | INFO     | cat /etc/os-release:
[2025-11-20 12:04:59] NAME="CentOS Linux"
[2025-11-20 12:04:59] VERSION="7 (Core)"
[2025-11-20 12:04:59] ID="centos"
[2025-11-20 12:04:59] ID_LIKE="rhel fedora"
[2025-11-20 12:04:59] VERSION_ID="7"
[2025-11-20 12:04:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 12:04:59] ANSI_COLOR="0;31"
[2025-11-20 12:04:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 12:04:59] HOME_URL="https://www.centos.org/"
[2025-11-20 12:04:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 12:04:59] 
[2025-11-20 12:04:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 12:04:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 12:04:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 12:04:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 12:04:59] 
[2025-11-20 12:04:59] 2025-11-20 17:04:27,413 | INFO     | ***************************************
[2025-11-20 12:04:59] 2025-11-20 17:04:27,917 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-20 12:04:59] 2025-11-20 17:04:27,947 | INFO     | sufficient remaining disk space (60062433280 B)
[2025-11-20 12:04:59] 2025-11-20 17:04:27,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 12:04:59] 2025-11-20 17:04:27,947 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 12:04:59] 2025-11-20 17:04:27,947 | INFO     | update_server=False
[2025-11-20 12:04:59] 2025-11-20 17:04:27,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 12:04:59] 2025-11-20 17:04:27,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 12:04:59] 2025-11-20 17:04:27,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 12:04:59] 2025-11-20 17:04:27,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 12:04:59] 2025-11-20 17:04:27,952 | INFO     | aborting loop
[2025-11-20 12:04:59] 2025-11-20 17:04:28,910 | INFO     | all data control threads have been joined
[2025-11-20 12:04:59] 2025-11-20 17:04:28,956 | INFO     | [job] retrieve thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:28,958 | INFO     | [job] job monitor thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:28,982 | INFO     | [payload] failed_post thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:29,133 | INFO     | [payload] validate_post thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:29,247 | INFO     | all payload control threads have been joined
[2025-11-20 12:04:59] 2025-11-20 17:04:29,396 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:29,463 | INFO     | all job control threads have been joined
[2025-11-20 12:04:59] 2025-11-20 17:04:29,587 | INFO     | [job] validate thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:29,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:29,847 | INFO     | [data] copytool_in thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:29,917 | INFO     | [data] control thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:29,959 | INFO     | [data] copytool_out thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:30,095 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:30,106 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:30,253 | INFO     | [payload] control thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:30,469 | INFO     | [job] control thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:30,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 12:04:59] 2025-11-20 17:04:31,629 | INFO     | [job] queue monitor thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:31,958 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 12:04:59] 2025-11-20 17:04:32,927 | INFO     | [monitor] cgroup control has ended
[2025-11-20 12:04:59] 2025-11-20 17:04:33,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562585261888)>', '<ExcThread(monitor, started 140562216752896)>']
[2025-11-20 12:04:59] 2025-11-20 17:04:38,567 | INFO     | all workflow threads have been joined
[2025-11-20 12:04:59] 2025-11-20 17:04:38,568 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 12:04:59] 2025-11-20 17:04:38,620 | INFO     | traces error code: 0
[2025-11-20 12:04:59] 2025-11-20 17:04:38,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 12:04:59] 2025-11-20 17:04:44,248 [wrapper] supervise_pilot (15 min periods counter: 74)
[2025-11-20 12:04:59] 2025-11-20 17:04:58,917 | INFO     | PID=849022 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 12:04:59] 2025-11-20 17:04:58,918 | INFO     | .. there are 10 such processes running
[2025-11-20 12:04:59] 2025-11-20 17:04:58,919 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 12:04:59] 2025-11-20 17:04:58,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 12:04:59] 2025-11-20 17:04:58,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 12:04:59] 2025-11-20 17:04:58,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 12:04:59] 2025-11-20 17:04:58,923 | CRITICAL | thread 'MainThread' is not alive
[2025-11-20 12:04:59] 2025-11-20 17:04:58,923 | INFO     | [monitor] control thread has ended
[2025-11-20 12:04:59] 2025-11-20 17:04:59,288 [wrapper] ==== pilot stdout END ====
[2025-11-20 12:04:59] 2025-11-20 17:04:59,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 12:04:59] 2025-11-20 17:04:59,298 [wrapper] pilotpid: 849022
[2025-11-20 12:04:59] 2025-11-20 17:04:59,314 [wrapper] Pilot exit status: 0
[2025-11-20 12:04:59] 2025-11-20 17:04:59,345 [wrapper] pandaids: 6891594305
[2025-11-20 12:04:59] 2025-11-20 17:04:59,432 [wrapper] cleanup supervisor_pilot 2441202 849023
[2025-11-20 12:04:59] 2025-11-20 17:04:59,436 [wrapper] Test setup, not cleaning
[2025-11-20 12:04:59] 2025-11-20 17:04:59,440 [wrapper] apfmon messages muted
[2025-11-20 12:04:59] 2025-11-20 17:04:59,443 [wrapper] ==== wrapper stdout END ====
[2025-11-20 12:04:59] 2025-11-20 17:04:59,446 [wrapper] ==== wrapper stderr END ====
[2025-11-20 12:04:59]  *** Error codes and diagnostics ***
[2025-11-20 12:04:59]     "exeErrorCode": 0,
[2025-11-20 12:04:59]     "exeErrorDiag": "",
[2025-11-20 12:04:59]     "pilotErrorCode": 0,
[2025-11-20 12:04:59]     "pilotErrorDiag": "",
[2025-11-20 12:04:59]  *** Listing of results directory ***
[2025-11-20 12:04:59] total 1334492
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:36 pilot3.tar.gz
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:37 queuedata.json
[2025-11-20 12:04:59] -rwx------. 1 boincer umatlas     36292 Nov 18 13:38 runpilot2-wrapper.sh
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas       100 Nov 19 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 12:04:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 17:49 run_atlas
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas       105 Nov 19 17:49 job.xml
[2025-11-20 12:04:59] -rw-r--r--. 2 boincer umatlas 411458914 Nov 19 17:49 EVNT.47493065._000760.pool.root.1
[2025-11-20 12:04:59] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 17:49 input.tar.gz
[2025-11-20 12:04:59] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 17:49 start_atlas.sh
[2025-11-20 12:04:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 17:49 shared
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas         0 Nov 19 17:49 boinc_lockfile
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas      2772 Nov 19 17:49 pandaJob.out
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas    989435 Nov 19 17:49 agis_schedconf.cvmfs.json
[2025-11-20 12:04:59] drwx------. 5 boincer umatlas      4096 Nov 19 17:49 pilot3
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas       533 Nov 20 11:46 boinc_task_state.xml
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas      6615 Nov 20 12:00 init_data.xml
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas 928940349 Nov 20 12:03 HITS.47493068._006249.pool.root.1
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas      1057 Nov 20 12:03 memory_monitor_summary.json
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas   1526164 Nov 20 12:04 agis_ddmendpoints.agis.ALL.json
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas   2350280 Nov 20 12:04 log.47493068._006249.job.log.tgz.1
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas      8621 Nov 20 12:04 heartbeat.json
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 12:04 boinc_mmap_file
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas        29 Nov 20 12:04 wrapper_checkpoint.txt
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas        95 Nov 20 12:04 pilot_heartbeat.json
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas       892 Nov 20 12:04 pilotlog.txt
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas   8754065 Nov 20 12:04 log.47493068._006249.job.log.1
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas       353 Nov 20 12:04 output.list
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas       620 Nov 20 12:04 runtime_log
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas  11120640 Nov 20 12:04 result.tar.gz
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas      8704 Nov 20 12:04 runtime_log.err
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas       660 Nov 20 12:04 LOVMDm3lff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrHGKDmLVd3Jo.diag
[2025-11-20 12:04:59] -rw-r--r--. 1 boincer umatlas     21268 Nov 20 12:04 stderr.txt
[2025-11-20 12:04:59] HITS file was successfully produced:
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas 928940349 Nov 20 12:03 shared/HITS.pool.root.1
[2025-11-20 12:04:59]  *** Contents of shared directory: ***
[2025-11-20 12:04:59] total 1320448
[2025-11-20 12:04:59] -rw-r--r--. 2 boincer umatlas 411458914 Nov 19 17:49 ATLAS.root_0
[2025-11-20 12:04:59] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 17:49 input.tar.gz
[2025-11-20 12:04:59] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 17:49 start_atlas.sh
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas 928940349 Nov 20 12:03 HITS.pool.root.1
[2025-11-20 12:04:59] -rw-------. 1 boincer umatlas  11120640 Nov 20 12:04 result.tar.gz
12:05:01 (845004): run_atlas exited; CPU time 340198.542201
12:05:01 (845004): called boinc_finish(0)

</stderr_txt>
]]>

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