Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:55:35 (2203365): wrapper (7.7.26015): starting
23:55:35 (2203365): wrapper: running run_atlas (--nthreads 2)
[2025-11-21 23:55:35] Arguments: --nthreads 2
[2025-11-21 23:55:35] Threads: 2
[2025-11-21 23:55:35] Checking for CVMFS
[2025-11-21 23:55:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:55:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:55:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:55:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:55:35] 2.9.2.0 1624889 4493 55960 153148 1 81 19463984 36864001 0 130560 0 1439084 99.839 320849 5752 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 23:55:35] CVMFS is ok
[2025-11-21 23:55:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 23:55:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 23:55:35] Further information can be found at the LHC@home message board.
[2025-11-21 23:55:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:55:35] Checking for apptainer binary...
[2025-11-21 23:55:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:55:35] Running /usr/bin/apptainer --version
[2025-11-21 23:55:35] apptainer version 1.4.1-1.1
[2025-11-21 23:55:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:55:35] thA315
[2025-11-21 23:55:35] apptainer works
[2025-11-21 23:55:35] Set ATHENA_PROC_NUMBER=2
[2025-11-21 23:55:35] Set ATHENA_CORE_NUMBER=2
[2025-11-21 23:55:35] Starting ATLAS job with PandaID=6892540263
[2025-11-21 23:55:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 12:45:16]  *** The last 200 lines of the pilot log: ***
[2025-11-22 12:45:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 12:45:16] 
[2025-11-22 12:45:16] 2025-11-22 11:44:45,934 | INFO     | ***************************************
[2025-11-22 12:45:16] 2025-11-22 11:44:46,437 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-22 12:45:16] 2025-11-22 11:44:46,448 | INFO     | sufficient remaining disk space (502209183744 B)
[2025-11-22 12:45:16] 2025-11-22 11:44:46,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 12:45:16] 2025-11-22 11:44:46,448 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 12:45:16] 2025-11-22 11:44:46,448 | INFO     | update_server=False
[2025-11-22 12:45:16] 2025-11-22 11:44:46,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 12:45:16] 2025-11-22 11:44:46,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 12:45:16] 2025-11-22 11:44:46,674 | INFO     | all job control threads have been joined
[2025-11-22 12:45:16] 2025-11-22 11:44:47,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 12:45:16] 2025-11-22 11:44:47,284 | INFO     | aborting loop
[2025-11-22 12:45:16] 2025-11-22 11:44:47,313 | INFO     | all data control threads have been joined
[2025-11-22 12:45:16] 2025-11-22 11:44:47,454 | INFO     | [job] retrieve thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:47,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 12:45:16] 2025-11-22 11:44:47,479 | INFO     | all payload control threads have been joined
[2025-11-22 12:45:16] 2025-11-22 11:44:47,681 | INFO     | [job] control thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:47,726 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,272 | INFO     | [payload] validate_post thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,290 | INFO     | [job] job monitor thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,318 | INFO     | [data] control thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,337 | INFO     | [data] copytool_in thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,479 | INFO     | [payload] failed_post thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,485 | INFO     | [payload] control thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,570 | INFO     | [data] copytool_out thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,741 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,870 | INFO     | [job] validate thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:48,895 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:49,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 12:45:16] 2025-11-22 11:44:50,366 | INFO     | [job] queue monitor thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:51,462 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 12:45:16] 2025-11-22 11:44:55,104 | INFO     | [monitor] cgroup control has ended
[2025-11-22 12:45:16] 2025-11-22 11:44:55,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610252097344)>', '<ExcThread(monitor, started 140609755006720)>']
[2025-11-22 12:45:16] 2025-11-22 11:45:00,724 | INFO     | all workflow threads have been joined
[2025-11-22 12:45:16] 2025-11-22 11:45:00,726 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 12:45:16] 2025-11-22 11:45:00,726 | INFO     | traces error code: 0
[2025-11-22 12:45:16] 2025-11-22 11:45:00,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 12:45:16] 2025-11-22 11:45:16,669 | INFO     | PID=2207073 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 12:45:16] 2025-11-22 11:45:16,669 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 12:45:16] 2025-11-22 11:45:16,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 12:45:16] 2025-11-22 11:45:16,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 12:45:16] 2025-11-22 11:45:16,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 12:45:16] 2025-11-22 11:45:16,669 | CRITICAL | thread 'MainThread' is not alive
[2025-11-22 12:45:16] 2025-11-22 11:45:16,669 | INFO     | [monitor] control thread has ended
[2025-11-22 12:45:16] 2025-11-22 11:45:16,710 [wrapper] ==== pilot stdout END ====
[2025-11-22 12:45:16] 2025-11-22 11:45:16,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 12:45:16] 2025-11-22 11:45:16,715 [wrapper] pilotpid: 2207073
[2025-11-22 12:45:16] 2025-11-22 11:45:16,718 [wrapper] Pilot exit status: 0
[2025-11-22 12:45:16] 2025-11-22 11:45:16,724 [wrapper] pandaids: 6892540263
[2025-11-22 12:45:16] 2025-11-22 11:45:16,737 [wrapper] cleanup supervisor_pilot 2302061 2207074
[2025-11-22 12:45:16] 2025-11-22 11:45:16,740 [wrapper] Test setup, not cleaning
[2025-11-22 12:45:16] 2025-11-22 11:45:16,741 [wrapper] apfmon messages muted
[2025-11-22 12:45:16] 2025-11-22 11:45:16,743 [wrapper] ==== wrapper stdout END ====
[2025-11-22 12:45:16] 2025-11-22 11:45:16,745 [wrapper] ==== wrapper stderr END ====
[2025-11-22 12:45:16]  *** Error codes and diagnostics ***
[2025-11-22 12:45:16]     "exeErrorCode": 0,
[2025-11-22 12:45:16]     "exeErrorDiag": "",
[2025-11-22 12:45:16]     "pilotErrorCode": 0,
[2025-11-22 12:45:16]     "pilotErrorDiag": "",
[2025-11-22 12:45:16]  *** Listing of results directory ***
[2025-11-22 12:45:16] total 1317132
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:27 pilot3.tar.gz
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:30 queuedata.json
[2025-11-22 12:45:16] -rwx------ 1 boinc boinc     36292 Nov 19 08:30 runpilot2-wrapper.sh
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc       100 Nov 21 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 12:45:16] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 23:55 run_atlas
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc       105 Nov 21 23:55 job.xml
[2025-11-22 12:45:16] -rw-r--r-- 2 boinc boinc 409586154 Nov 21 23:55 EVNT.47493027._000226.pool.root.1
[2025-11-22 12:45:16] -rw-r--r-- 2 boinc boinc    590102 Nov 21 23:55 input.tar.gz
[2025-11-22 12:45:16] -rw-r--r-- 2 boinc boinc     15120 Nov 21 23:55 start_atlas.sh
[2025-11-22 12:45:16] drwxrwx--x 2 boinc boinc      4096 Nov 21 23:55 shared
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc         0 Nov 21 23:55 boinc_setup_complete
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc      6205 Nov 21 23:55 init_data.xml
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc         0 Nov 21 23:55 boinc_lockfile
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc      2773 Nov 21 23:55 pandaJob.out
[2025-11-22 12:45:16] -rw------- 1 boinc boinc    989798 Nov 21 23:55 agis_schedconf.cvmfs.json
[2025-11-22 12:45:16] drwx------ 5 boinc boinc      4096 Nov 21 23:55 pilot3
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc       532 Nov 22 12:40 boinc_task_state.xml
[2025-11-22 12:45:16] -rw------- 1 boinc boinc 919831851 Nov 22 12:44 HITS.47493029._002213.pool.root.1
[2025-11-22 12:45:16] -rw------- 1 boinc boinc      1024 Nov 22 12:44 memory_monitor_summary.json
[2025-11-22 12:45:16] -rw------- 1 boinc boinc        95 Nov 22 12:44 pilot_heartbeat.json
[2025-11-22 12:45:16] -rw------- 1 boinc boinc   1526164 Nov 22 12:44 agis_ddmendpoints.agis.ALL.json
[2025-11-22 12:45:16] -rw------- 1 boinc boinc   1243874 Nov 22 12:44 log.47493029._002213.job.log.tgz.1
[2025-11-22 12:45:16] -rw------- 1 boinc boinc      8573 Nov 22 12:44 heartbeat.json
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc      8192 Nov 22 12:45 boinc_mmap_file
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc        28 Nov 22 12:45 wrapper_checkpoint.txt
[2025-11-22 12:45:16] -rw------- 1 boinc boinc       817 Nov 22 12:45 pilotlog.txt
[2025-11-22 12:45:16] -rw------- 1 boinc boinc   6466581 Nov 22 12:45 log.47493029._002213.job.log.1
[2025-11-22 12:45:16] -rw------- 1 boinc boinc       353 Nov 22 12:45 output.list
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc       620 Nov 22 12:45 runtime_log
[2025-11-22 12:45:16] -rw------- 1 boinc boinc   7731200 Nov 22 12:45 result.tar.gz
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc      8778 Nov 22 12:45 runtime_log.err
[2025-11-22 12:45:16] -rw------- 1 boinc boinc       665 Nov 22 12:45 UqUMDmOprf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmq1FKDmt9JxEn.diag
[2025-11-22 12:45:16] -rw-r--r-- 1 boinc boinc      8134 Nov 22 12:45 stderr.txt
[2025-11-22 12:45:16] HITS file was successfully produced:
[2025-11-22 12:45:16] -rw------- 1 boinc boinc 919831851 Nov 22 12:44 shared/HITS.pool.root.1
[2025-11-22 12:45:16]  *** Contents of shared directory: ***
[2025-11-22 12:45:16] total 1306420
[2025-11-22 12:45:16] -rw-r--r-- 2 boinc boinc 409586154 Nov 21 23:55 ATLAS.root_0
[2025-11-22 12:45:16] -rw-r--r-- 2 boinc boinc    590102 Nov 21 23:55 input.tar.gz
[2025-11-22 12:45:16] -rw-r--r-- 2 boinc boinc     15120 Nov 21 23:55 start_atlas.sh
[2025-11-22 12:45:16] -rw------- 1 boinc boinc 919831851 Nov 22 12:44 HITS.pool.root.1
[2025-11-22 12:45:16] -rw------- 1 boinc boinc   7731200 Nov 22 12:45 result.tar.gz
12:45:18 (2203365): run_atlas exited; CPU time 91512.606158
12:45:18 (2203365): called boinc_finish(0)

</stderr_txt>
]]>

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