Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-24 07:36:05 (8220): vboxwrapper version 26210
2025-11-24 07:36:05 (8220): BOINC client version: 8.0.2
2025-11-24 07:36:06 (8220): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2025-11-24 07:36:06 (8220): Successfully copied 'init_data.xml' to the shared directory.
2025-11-24 07:36:06 (8220): Create VM. (boinc_74d464220c65fb24, slot#1)
2025-11-24 07:36:07 (8220): Setting Memory Size for VM. (4800MB)
2025-11-24 07:36:07 (8220): Setting CPU Count for VM. (8)
2025-11-24 07:36:07 (8220): Setting Chipset Options for VM.
2025-11-24 07:36:08 (8220): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-24 07:36:08 (8220): Setting Boot Options for VM.
2025-11-24 07:36:08 (8220): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-24 07:36:09 (8220): Enabling VM Network Access.
2025-11-24 07:36:09 (8220): Disabling USB Support for VM.
2025-11-24 07:36:09 (8220): Disabling COM Port Support for VM.
2025-11-24 07:36:10 (8220): Disabling LPT Port Support for VM.
2025-11-24 07:36:10 (8220): Disabling Audio Support for VM.
2025-11-24 07:36:10 (8220): Disabling Clipboard Support for VM.
2025-11-24 07:36:10 (8220): Disabling Drag and Drop Support for VM.
2025-11-24 07:36:11 (8220): Adding storage controller(s) to VM.
2025-11-24 07:36:11 (8220): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-24 07:36:13 (8220): Adding VirtualBox Guest Additions to VM.
2025-11-24 07:36:13 (8220): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-24 07:36:14 (8220): forwarding host port 49468 to guest port 80
2025-11-24 07:36:14 (8220): Enabling remote desktop for VM.
2025-11-24 07:36:14 (8220): Required extension pack not installed, remote desktop not enabled.
2025-11-24 07:36:14 (8220): Enabling shared directory for VM.
2025-11-24 07:36:15 (8220): Starting VM using VBoxManage interface. (boinc_74d464220c65fb24, slot#1)
2025-11-24 07:36:20 (8220): Successfully started VM. (PID = '7724')
2025-11-24 07:36:20 (8220): Reporting VM Process ID to BOINC.
2025-11-24 07:36:20 (8220): Guest Log: BIOS: VirtualBox 7.1.0
2025-11-24 07:36:20 (8220): Guest Log: CPUID EDX: 0x178bfbff
2025-11-24 07:36:20 (8220): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-24 07:36:20 (8220): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-24 07:36:20 (8220): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-24 07:36:20 (8220): Detected: Web Application Enabled (http://localhost:49468)
2025-11-24 07:36:20 (8220): Preference change detected
2025-11-24 07:36:20 (8220): Setting CPU throttle for VM. (100%)
2025-11-24 07:36:20 (8220): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-24 07:36:22 (8220): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-24 07:36:22 (8220): Guest Log: BIOS: Booting from Hard Disk...
2025-11-24 07:36:25 (8220): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-24 07:36:25 (8220): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-24 07:36:25 (8220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-24 07:36:32 (8220): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-24 07:36:32 (8220): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-24 07:36:37 (8220): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.000148 main     Log opened 2025-11-24T07:36:36.224630000Z
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.000240 main     OS Product: Linux
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.000274 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.000296 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.000317 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.000318 main     Process ID: 1372
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.000318 main     Package type: LINUX_64BITS_GENERIC
2025-11-24 07:36:37 (8220): Guest Log: 00:00:00.001090 main     5.2.32 r132073 started. Verbose level = 0
2025-11-24 07:36:38 (8220): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-24 07:36:38 (8220): Guest Log: [INFO] Mounting shared directory
2025-11-24 07:36:38 (8220): Guest Log: [INFO] Checking for init_data.xml
2025-11-24 07:36:47 (8220): Guest Log: 00:00:10.003562 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 086 750 000ns (GuestNow=1 763 998 607 314 362 000 ns GuestLast=1 763 969 796 227 612 000 ns fSetTimeLastLoop=true )
2025-11-24 07:37:03 (8220): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-24 07:37:03 (8220): Guest Log: [INFO] Detected branch: prod
2025-11-24 07:37:05 (8220): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-24 07:37:05 (8220): Guest Log: Copying input files
2025-11-24 07:37:06 (8220): Guest Log: Copied input files into RunAtlas.
2025-11-24 07:37:06 (8220): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-24 07:37:06 (8220): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-24 07:37:06 (8220): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-24 07:37:06 (8220): Guest Log: Further information can be found at the LHC@home message board.
2025-11-24 07:37:25 (8220): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-24 07:37:27 (8220): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-24 07:37:27 (8220): Guest Log: 2.6.3.0 1665 0 32176 153250 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-24 07:37:28 (8220): Guest Log: copied the webapp to /var/www
2025-11-24 07:37:28 (8220): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-24 07:37:28 (8220): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-24 07:37:30 (8220): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-24 07:37:30 (8220): Guest Log:  *** Starting ATLAS job. (PandaID=6892534820 taskID=47493029) ***
2025-11-24 09:16:38 (8220): Status Report: Elapsed Time: '6000.000000'
2025-11-24 09:16:38 (8220): Status Report: CPU Time: '11683.203125'
2025-11-24 10:57:56 (8220): Status Report: Elapsed Time: '12000.075605'
2025-11-24 10:57:56 (8220): Status Report: CPU Time: '59019.281250'
2025-11-24 12:39:02 (8220): Status Report: Elapsed Time: '18000.075605'
2025-11-24 12:39:02 (8220): Status Report: CPU Time: '106391.500000'
2025-11-24 14:20:10 (8220): Status Report: Elapsed Time: '24000.075605'
2025-11-24 14:20:10 (8220): Status Report: CPU Time: '153738.234375'
2025-11-24 16:01:18 (8220): Status Report: Elapsed Time: '30000.075605'
2025-11-24 16:01:18 (8220): Status Report: CPU Time: '201082.093750'
2025-11-24 17:42:26 (8220): Status Report: Elapsed Time: '36000.075605'
2025-11-24 17:42:26 (8220): Status Report: CPU Time: '248506.484375'
2025-11-24 19:23:33 (8220): Status Report: Elapsed Time: '42000.075605'
2025-11-24 19:23:33 (8220): Status Report: CPU Time: '295881.031250'
2025-11-24 21:04:44 (8220): Status Report: Elapsed Time: '48000.641514'
2025-11-24 21:04:44 (8220): Status Report: CPU Time: '343196.093750'
2025-11-24 21:48:19 (8220): Guest Log:  *** Job finished ***
2025-11-24 21:48:19 (8220): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:06,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:06,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:11,816 | INFO     | [monitor] cgroup control has ended
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:12,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543813429056)>', '<ExcThread(monitor, started 140543359162112)>']
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:13,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:13,215 | INFO     | [monitor] control thread has ended
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,862 | INFO     | all workflow threads have been joined
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,863 | INFO     | end of generic workflow (traces error code: 0)
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,863 | INFO     | traces error code: 0
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,982 [wrapper] ==== pilot stdout END ====
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,987 [wrapper] ==== wrapper stdout RESUME ====
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,991 [wrapper] pilotpid: 6251
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:17,995 [wrapper] Pilot exit status: 0
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:18,011 [wrapper] pandaids: 6892534820
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:18,038 [wrapper] cleanup supervisor_pilot 10444 6252
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:18,044 [wrapper] Test setup, not cleaning
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:18,048 [wrapper] apfmon messages muted
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:18,052 [wrapper] ==== wrapper stdout END ====
2025-11-24 21:48:19 (8220): Guest Log: 2025-11-25 05:48:18,056 [wrapper] ==== wrapper stderr END ====
2025-11-24 21:48:19 (8220): Guest Log:  *** Error codes and diagnostics ***
2025-11-24 21:48:19 (8220): Guest Log:     "exeErrorCode": 0,
2025-11-24 21:48:19 (8220): Guest Log:     "exeErrorDiag": "",
2025-11-24 21:48:19 (8220): Guest Log:     "pilotErrorCode": 0,
2025-11-24 21:48:19 (8220): Guest Log:     "pilotErrorDiag": "",
2025-11-24 21:48:19 (8220): Guest Log:  *** Listing of results directory ***
2025-11-24 21:48:19 (8220): Guest Log: total 929916
2025-11-24 21:48:19 (8220): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 19 07:27 queuedata.json
2025-11-24 21:48:19 (8220): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 19 07:27 runpilot2-wrapper.sh
2025-11-24 21:48:19 (8220): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 19 07:27 pilot3.tar.gz
2025-11-24 21:48:19 (8220): Guest Log: -rwxr-xr-x. 1 atlas atlas      9029 Nov 24 15:37 init_data.xml
2025-11-24 21:48:19 (8220): Guest Log: -rwxr-xr-x. 1 atlas atlas    590089 Nov 24 15:37 input.tar.gz
2025-11-24 21:48:19 (8220): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 24 15:37 start_atlas.sh
2025-11-24 21:48:19 (8220): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 24 15:37 EVNT.47493027._000180.pool.root.1 -> /data/./ATLAS.root_0
2025-11-24 21:48:19 (8220): Guest Log: -rw-r--r--. 1 atlas atlas      2773 Nov 24 15:37 pandaJob.out
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas    987541 Nov 24 15:48 agis_schedconf.cvmfs.json
2025-11-24 21:48:19 (8220): Guest Log: drwx------. 5 atlas atlas      4096 Nov 24 15:49 pilot3
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas 931449448 Nov 25 05:46 HITS.47493029._001757.pool.root.1
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas      1049 Nov 25 05:46 memory_monitor_summary.json
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas   1516227 Nov 25 05:47 agis_ddmendpoints.agis.ALL.json
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas   2019171 Nov 25 05:47 log.47493029._001757.job.log.tgz.1
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas      8653 Nov 25 05:47 heartbeat.json
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas        95 Nov 25 05:48 pilot_heartbeat.json
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 25 05:48 pilotlog.txt
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas   6450994 Nov 25 05:48 log.47493029._001757.job.log.1
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas       353 Nov 25 05:48 output.list
2025-11-24 21:48:19 (8220): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 25 05:48 runtime_log
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas   8488960 Nov 25 05:48 result.tar.gz
2025-11-24 21:48:19 (8220): Guest Log: -rw-r--r--. 1 atlas atlas      8648 Nov 25 05:48 runtime_log.err
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas       670 Nov 25 05:48 EyyKDmhmrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrpGKDmg0D5Mo.diag
2025-11-24 21:48:19 (8220): Guest Log: Looking for outputfile HITS.47493029._001757.pool.root.1
2025-11-24 21:48:19 (8220): Guest Log: HITS file was successfully produced
2025-11-24 21:48:19 (8220): Guest Log: -rw-------. 1 atlas atlas 931449448 Nov 25 05:46 /home/atlas/RunAtlas/HITS.47493029._001757.pool.root.1
2025-11-24 21:48:22 (8220): Guest Log: Successfully finished the ATLAS job!
2025-11-24 21:48:22 (8220): Guest Log: Copying the results back to the shared directory!
2025-11-24 21:48:23 (8220): Guest Log:  *** Contents of shared directory: ***
2025-11-24 21:48:23 (8220): Guest Log: total 1320864
2025-11-24 21:48:23 (8220): Guest Log: -rwxrwxrwx. 1 root root 411999864 Nov 24 15:36 ATLAS.root_0
2025-11-24 21:48:23 (8220): Guest Log: -rwxrwxrwx. 1 root root 931449448 Nov 25 05:48 HITS.pool.root.1
2025-11-24 21:48:23 (8220): Guest Log: -rwxrwxrwx. 1 root root      9029 Nov 24 15:36 init_data.xml
2025-11-24 21:48:23 (8220): Guest Log: -rwxrwxrwx. 1 root root    590089 Nov 19 09:17 input.tar.gz
2025-11-24 21:48:23 (8220): Guest Log: -rwxrwxrwx. 1 root root   8488960 Nov 25 05:48 result.tar.gz
2025-11-24 21:48:23 (8220): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 19 09:17 start_atlas.sh
2025-11-24 21:48:23 (8220): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-24 21:48:23 (8220): VM Completion File Detected.
2025-11-24 21:48:23 (8220): Powering off VM.
2025-11-24 21:48:24 (8220): Successfully stopped VM.
2025-11-24 21:48:24 (8220): Deregistering VM. (boinc_74d464220c65fb24, slot#1)
2025-11-24 21:48:24 (8220): Removing network bandwidth throttle group from VM.
2025-11-24 21:48:25 (8220): Removing VM from VirtualBox.
2025-11-24 21:48:30 (8220): called boinc_finish(0)

</stderr_txt>
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