Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:04:19 (287277): wrapper (7.7.26015): starting
01:04:19 (287277): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 01:04:19] Arguments: --nthreads 8
[2025-11-19 01:04:19] Threads: 8
[2025-11-19 01:04:19] Checking for CVMFS
[2025-11-19 01:04:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 01:04:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 01:04:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 01:04:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 01:04:20] 2.11.3.0 3806795 18102 245036 153036 1 257 24768196 45568000 7521 130560 0 119439524 99.816 57234269 10174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-19 01:04:20] CVMFS is ok
[2025-11-19 01:04:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 01:04:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 01:04:20] Further information can be found at the LHC@home message board.
[2025-11-19 01:04:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 01:04:20] Checking for apptainer binary...
[2025-11-19 01:04:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 01:04:20] Running /usr/bin/apptainer --version
[2025-11-19 01:04:20] apptainer version 1.4.1-1.el9
[2025-11-19 01:04:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 01:04:20] wns0005.triumf.lcg
[2025-11-19 01:04:20] apptainer works
[2025-11-19 01:04:20] Set ATHENA_PROC_NUMBER=8
[2025-11-19 01:04:20] Set ATHENA_CORE_NUMBER=8
[2025-11-19 01:04:20] Starting ATLAS job with PandaID=6892534793
[2025-11-19 01:04:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 01:09:41]  *** The last 200 lines of the pilot log: ***
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 01:09:41] 2025-11-19 09:08:56,106 | WARNING  | wrong length of table data, x=[1763543108.0, 1763543169.0], y=[1959.0, 349926.0] (must be same and length>=4)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | ..............................
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . Timing measurements:
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . get job = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . initial setup = 3 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . payload setup = 9 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . stage-in = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . payload execution = 104 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . stage-out = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . log creation = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | ..............................
[2025-11-19 01:09:41] 2025-11-19 09:08:56,108 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 01:09:41] 2025-11-19 09:08:56,108 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892534793/pilotlog.txt
[2025-11-19 01:09:41] 2025-11-19 09:08:56,123 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-19 01:09:41] - Log from pilotlog.txt -
[2025-11-19 01:09:41] 2025-11-19 09:08:56,104 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892534793/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,104 | INFO     | extracted standard info from prmon json
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 01:09:41] 2025-11-19 09:08:56,106 | WARNING  | wrong length of table data, x=[1763543108.0, 1763543169.0], y=[1959.0, 349926.0] (must be same and length>=4)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | ..............................
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . Timing measurements:
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . get job = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . initial setup = 3 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . payload setup = 9 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . stage-in = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . payload execution = 104 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . stage-out = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . log creation = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | ..............................
[2025-11-19 01:09:41] 2025-11-19 09:08:56,108 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 01:09:41] 2025-11-19 09:08:56,108 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892534793/pilotlog.txt
[2025-11-19 01:09:41] 2025-11-19 09:08:56,124 | WARNING  | 
[2025-11-19 01:09:41] [begin log extracts]
[2025-11-19 01:09:41] - Log from pilotlog.txt -
[2025-11-19 01:09:41] 2025-11-19 09:08:56,104 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892534793/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,104 | INFO     | extracted standard info from prmon json
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 01:09:41] 2025-11-19 09:08:56,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 01:09:41] 2025-11-19 09:08:56,106 | WARNING  | wrong length of table data, x=[1763543108.0, 1763543169.0], y=[1959.0, 349926.0] (must be same and length>=4)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | ..............................
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . Timing measurements:
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . get job = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . initial setup = 3 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . payload setup = 9 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . stage-in = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . payload execution = 104 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . stage-out = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | . log creation = 0 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,107 | INFO     | ..............................
[2025-11-19 01:09:41] 2025-11-19 09:08:56,108 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 01:09:41] 2025-11-19 09:08:56,108 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892534793/pilotlog.txt
[2025-11-19 01:09:41] [end log extracts]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,124 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,125 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-19 01:09:41] 2025-11-19 09:08:56,600 | INFO     | 
[2025-11-19 01:09:41] 2025-11-19 09:08:56,600 | INFO     | job summary report
[2025-11-19 01:09:41] 2025-11-19 09:08:56,600 | INFO     | --------------------------------------------------
[2025-11-19 01:09:41] 2025-11-19 09:08:56,600 | INFO     | PanDA job id: 6892534793
[2025-11-19 01:09:41] 2025-11-19 09:08:56,600 | INFO     | task id: 47493029
[2025-11-19 01:09:41] 2025-11-19 09:08:56,600 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-19 01:06:41,535 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-19 01:09:41] 2025-11-19 09:08:56,600 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | pilot state: failed 
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | transexitcode: 65
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | exeerrorcode: 65
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | exitcode: 65
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | cpuconsumptiontime: 50 s
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | nevents: 0
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | neventsw: 0
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | pid: 297460
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | pgrp: 297460
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | corecount: 8
[2025-11-19 01:09:41] 2025-11-19 09:08:56,601 | INFO     | event service: False
[2025-11-19 01:09:41] 2025-11-19 09:08:56,602 | INFO     | sizes: {0: 2297197, 8: 2297459, 11: 2297487, 118: 2327185, 121: 2327185, 245: 2327351}
[2025-11-19 01:09:41] 2025-11-19 09:08:56,602 | INFO     | --------------------------------------------------
[2025-11-19 01:09:41] 2025-11-19 09:08:56,602 | INFO     | 
[2025-11-19 01:09:41] 2025-11-19 09:08:56,602 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-19 01:09:41] 2025-11-19 09:08:56,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | job 6892534793 has completed (purged errors)
[2025-11-19 01:09:41] 2025-11-19 09:08:56,620 | INFO     | overall cleanup function is called
[2025-11-19 01:09:41] 2025-11-19 09:08:57,638 | INFO     | --- collectZombieJob: --- 10, [297460]
[2025-11-19 01:09:41] 2025-11-19 09:08:57,638 | INFO     | zombie collector waiting for pid 297460
[2025-11-19 01:09:41] 2025-11-19 09:08:57,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 01:09:41] 2025-11-19 09:08:57,638 | INFO     | collected zombie processes
[2025-11-19 01:09:41] 2025-11-19 09:08:57,638 | INFO     | will attempt to kill all subprocesses of pid=297460
[2025-11-19 01:09:41] 2025-11-19 09:08:57,896 | INFO     | process IDs to be killed: [297460] (in reverse order)
[2025-11-19 01:09:41] 2025-11-19 09:08:57,947 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 01:09:41] 2025-11-19 09:08:57,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 01:09:41] 2025-11-19 09:08:58,024 | INFO     | did not find any defunct processes belonging to 297460
[2025-11-19 01:09:41] 2025-11-19 09:08:58,029 | INFO     | did not find any defunct processes belonging to 297460
[2025-11-19 01:09:41] 2025-11-19 09:08:58,030 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 01:09:41] 2025-11-19 09:08:58,030 | INFO     | ready for new job
[2025-11-19 01:09:41] 2025-11-19 09:08:58,030 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 01:09:41] 2025-11-19 09:08:58,031 | INFO     | ***************************************
[2025-11-19 01:09:41] 2025-11-19 09:08:58,031 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 01:09:41] 2025-11-19 09:08:58,031 | INFO     | ***************************************
[2025-11-19 01:09:41] 2025-11-19 09:08:58,031 | INFO     | 
[2025-11-19 01:09:41] 2025-11-19 09:08:58,033 | INFO     | architecture information:
[2025-11-19 01:09:41] 2025-11-19 09:08:58,033 | INFO     | executing command: cat /etc/os-release
[2025-11-19 01:09:41] 2025-11-19 09:08:58,054 | INFO     | cat /etc/os-release:
[2025-11-19 01:09:41] NAME="CentOS Linux"
[2025-11-19 01:09:41] VERSION="7 (Core)"
[2025-11-19 01:09:41] ID="centos"
[2025-11-19 01:09:41] ID_LIKE="rhel fedora"
[2025-11-19 01:09:41] VERSION_ID="7"
[2025-11-19 01:09:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 01:09:41] ANSI_COLOR="0;31"
[2025-11-19 01:09:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 01:09:41] HOME_URL="https://www.centos.org/"
[2025-11-19 01:09:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 01:09:41] 
[2025-11-19 01:09:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 01:09:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 01:09:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 01:09:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 01:09:41] 
[2025-11-19 01:09:41] 2025-11-19 09:08:58,054 | INFO     | ***************************************
[2025-11-19 01:09:41] 2025-11-19 09:08:58,558 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-19 01:09:41] 2025-11-19 09:08:58,585 | INFO     | sufficient remaining disk space (1414743982080 B)
[2025-11-19 01:09:41] 2025-11-19 09:08:58,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 01:09:41] 2025-11-19 09:08:58,585 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 01:09:41] 2025-11-19 09:08:58,586 | INFO     | update_server=False
[2025-11-19 01:09:41] 2025-11-19 09:08:58,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 01:09:41] 2025-11-19 09:08:58,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 01:09:41] 2025-11-19 09:08:58,586 | INFO     | aborting loop
[2025-11-19 01:09:41] 2025-11-19 09:08:58,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 01:09:41] 2025-11-19 09:08:58,876 | INFO     | all payload control threads have been joined
[2025-11-19 01:09:41] 2025-11-19 09:08:59,479 | INFO     | all data control threads have been joined
[2025-11-19 01:09:41] 2025-11-19 09:08:59,593 | INFO     | [job] retrieve thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:08:59,593 | INFO     | [job] job monitor thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:08:59,689 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:08:59,887 | INFO     | [payload] control thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:08:59,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 01:09:41] 2025-11-19 09:09:00,012 | INFO     | all job control threads have been joined
[2025-11-19 01:09:41] 2025-11-19 09:09:00,181 | INFO     | [payload] failed_post thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,362 | INFO     | [data] copytool_in thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,386 | INFO     | [payload] validate_post thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,485 | INFO     | [data] control thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,593 | INFO     | [data] copytool_out thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,846 | INFO     | [job] validate thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,953 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:00,991 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:01,018 | INFO     | [job] control thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:01,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 01:09:41] 2025-11-19 09:09:02,232 | INFO     | [job] queue monitor thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:03,944 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 01:09:41] 2025-11-19 09:09:28,371 | INFO     | PID=290914 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-19 01:09:41] 2025-11-19 09:09:28,371 | INFO     | .. there are 11 such processes running
[2025-11-19 01:09:41] 2025-11-19 09:09:28,371 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 01:09:41] 2025-11-19 09:09:28,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 01:09:41] 2025-11-19 09:09:28,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 01:09:41] 2025-11-19 09:09:34,546 | INFO     | [monitor] cgroup control has ended
[2025-11-19 01:09:41] 2025-11-19 09:09:35,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686877243200)>', '<ExcThread(monitor, started 139686353823488)>']
[2025-11-19 01:09:41] 2025-11-19 09:09:36,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 01:09:41] 2025-11-19 09:09:36,430 | INFO     | [monitor] control thread has ended
[2025-11-19 01:09:41] 2025-11-19 09:09:40,797 | INFO     | all workflow threads have been joined
[2025-11-19 01:09:41] 2025-11-19 09:09:40,797 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 01:09:41] 2025-11-19 09:09:40,797 | INFO     | traces error code: 0
[2025-11-19 01:09:41] 2025-11-19 09:09:40,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 01:09:41] 2025-11-19 09:09:40,956 [wrapper] ==== pilot stdout END ====
[2025-11-19 01:09:41] 2025-11-19 09:09:40,992 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 01:09:41] 2025-11-19 09:09:41,027 [wrapper] pilotpid: 290914
[2025-11-19 01:09:41] 2025-11-19 09:09:41,062 [wrapper] Pilot exit status: 0
[2025-11-19 01:09:41] 2025-11-19 09:09:41,082 [wrapper] pandaids: 6892534793
[2025-11-19 01:09:41] 2025-11-19 09:09:41,111 [wrapper] cleanup supervisor_pilot  290920 290915
[2025-11-19 01:09:41] 2025-11-19 09:09:41,120 [wrapper] Test setup, not cleaning
[2025-11-19 01:09:41] 2025-11-19 09:09:41,122 [wrapper] apfmon messages muted
[2025-11-19 01:09:41] 2025-11-19 09:09:41,123 [wrapper] ==== wrapper stdout END ====
[2025-11-19 01:09:41] 2025-11-19 09:09:41,125 [wrapper] ==== wrapper stderr END ====
[2025-11-19 01:09:41]  *** Error codes and diagnostics ***
[2025-11-19 01:09:41]     "exeErrorCode": 65,
[2025-11-19 01:09:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-19 01:09:41]     "pilotErrorCode": 1305,
[2025-11-19 01:09:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-19 01:09:41]  *** Listing of results directory ***
[2025-11-19 01:09:41] total 406348
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc      5112 Nov 18 23:27 queuedata.json
[2025-11-19 01:09:41] -rwx------. 1 boinc boinc     36292 Nov 18 23:27 runpilot2-wrapper.sh
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc    576529 Nov 18 23:27 pilot3.tar.gz
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc       100 Nov 19 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 01:09:41] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 01:04 run_atlas
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc       105 Nov 19 01:04 job.xml
[2025-11-19 01:09:41] -rw-r--r--. 2 boinc boinc 411877933 Nov 19 01:04 EVNT.47493027._000177.pool.root.1
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc      6444 Nov 19 01:04 init_data.xml
[2025-11-19 01:09:41] -rw-r--r--. 2 boinc boinc     15120 Nov 19 01:04 start_atlas.sh
[2025-11-19 01:09:41] drwxrwx--x. 2 boinc boinc      4096 Nov 19 01:04 shared
[2025-11-19 01:09:41] -rw-r--r--. 2 boinc boinc    590088 Nov 19 01:04 input.tar.gz
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc         0 Nov 19 01:04 boinc_lockfile
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc      2773 Nov 19 01:04 pandaJob.out
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc    989279 Nov 19 01:04 agis_schedconf.cvmfs.json
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc   1525063 Nov 19 01:04 agis_ddmendpoints.agis.ALL.json
[2025-11-19 01:09:41] drwx------. 5 boinc boinc      4096 Nov 19 01:04 pilot3
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc       524 Nov 19 01:06 boinc_task_state.xml
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc       991 Nov 19 01:06 memory_monitor_summary.json
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc     48835 Nov 19 01:06 log.47493029._001730.job.log.tgz.1
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc        95 Nov 19 01:08 pilot_heartbeat.json
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc     10325 Nov 19 01:08 heartbeat.json
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc      8192 Nov 19 01:09 boinc_mmap_file
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc        23 Nov 19 01:09 wrapper_checkpoint.txt
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc      4822 Nov 19 01:09 pilotlog.txt
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc     99614 Nov 19 01:09 log.47493029._001730.job.log.1
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc       186 Nov 19 01:09 output.list
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc       620 Nov 19 01:09 runtime_log
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc    174080 Nov 19 01:09 result.tar.gz
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc      8526 Nov 19 01:09 runtime_log.err
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc       644 Nov 19 01:09 h6RKDmhmrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTpGKDm29CMpm.diag
[2025-11-19 01:09:41] -rw-r--r--. 1 boinc boinc     22439 Nov 19 01:09 stderr.txt
[2025-11-19 01:09:41] No HITS result produced
[2025-11-19 01:09:41]  *** Contents of shared directory: ***
[2025-11-19 01:09:41] total 403000
[2025-11-19 01:09:41] -rw-r--r--. 2 boinc boinc 411877933 Nov 19 01:04 ATLAS.root_0
[2025-11-19 01:09:41] -rw-r--r--. 2 boinc boinc     15120 Nov 19 01:04 start_atlas.sh
[2025-11-19 01:09:41] -rw-r--r--. 2 boinc boinc    590088 Nov 19 01:04 input.tar.gz
[2025-11-19 01:09:41] -rw-------. 1 boinc boinc    174080 Nov 19 01:09 result.tar.gz
01:09:42 (287277): run_atlas exited; CPU time 50.092046
01:09:42 (287277): called boinc_finish(0)

</stderr_txt>
]]>

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