Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:31 (2386903): wrapper (7.7.26015): starting
22:12:31 (2386903): wrapper: running run_atlas (--nthreads 2)
[2025-11-21 22:12:31] Arguments: --nthreads 2
[2025-11-21 22:12:31] Threads: 2
[2025-11-21 22:12:31] Checking for CVMFS
[2025-11-21 22:12:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:12:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:12:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:12:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:12:31] 2.9.2.0 1870311 4431 55624 153143 0 81 32946920 36864001 0 130560 0 1425289 99.844 315265 5338 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 22:12:31] CVMFS is ok
[2025-11-21 22:12:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 22:12:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 22:12:31] Further information can be found at the LHC@home message board.
[2025-11-21 22:12:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:12:31] Checking for apptainer binary...
[2025-11-21 22:12:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:12:31] Running /usr/bin/apptainer --version
[2025-11-21 22:12:31] apptainer version 1.4.1-1.1
[2025-11-21 22:12:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:12:31] legendA269
[2025-11-21 22:12:31] apptainer works
[2025-11-21 22:12:31] Set ATHENA_PROC_NUMBER=2
[2025-11-21 22:12:31] Set ATHENA_CORE_NUMBER=2
[2025-11-21 22:12:31] Starting ATLAS job with PandaID=6892528207
[2025-11-21 22:12:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 10:20:54]  *** The last 200 lines of the pilot log: ***
[2025-11-22 10:20:54] 2025-11-22 09:19:52,484 | INFO     | executing command: lscpu
[2025-11-22 10:20:54] 2025-11-22 09:19:52,498 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-22 10:20:54] 2025-11-22 09:19:53,953 | INFO     | time since job start (43627s) is within the limit (172800.0s)
[2025-11-22 10:20:54] 2025-11-22 09:19:54,865 | INFO     | monitor loop #3328: job 0:6892528207 is in state 'finished'
[2025-11-22 10:20:54] 2025-11-22 09:19:54,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:20:54] 2025-11-22 09:19:55,958 | INFO     | time since job start (43629s) is within the limit (172800.0s)
[2025-11-22 10:20:54] 2025-11-22 09:19:57,369 | INFO     | monitor loop #3329: job 0:6892528207 is in state 'finished'
[2025-11-22 10:20:54] 2025-11-22 09:19:57,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 10:20:54] 2025-11-22 09:19:57,964 | INFO     | time since job start (43631s) is within the limit (172800.0s)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,056 | INFO     | PID=2390612 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 10:20:54] 2025-11-22 09:19:59,308 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 10:20:54] 2025-11-22 09:19:59,309 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3072.011375
[2025-11-22 10:20:54] 2025-11-22 09:19:59,310 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6892528207/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,311 | INFO     | extracted standard info from prmon json
[2025-11-22 10:20:54] 2025-11-22 09:19:59,311 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 10:20:54] 2025-11-22 09:19:59,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 10:20:54] 2025-11-22 09:19:59,315 | INFO     | fitting pss+swap vs Time
[2025-11-22 10:20:54] 2025-11-22 09:19:59,316 | INFO     | sum of square deviations: 113343260030.0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,321 | INFO     | sum of deviations: 285925852172.0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,321 | INFO     | mean x: 1763781371.0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,321 | INFO     | mean y: 2019216.620979021
[2025-11-22 10:20:54] 2025-11-22 09:19:59,321 | INFO     | intersect: -4447391285.730825
[2025-11-22 10:20:54] 2025-11-22 09:19:59,322 | INFO     | chi2: 2.9076605258743142
[2025-11-22 10:20:54] 2025-11-22 09:19:59,322 | INFO     | sum of square deviations: 110982015757.5
[2025-11-22 10:20:54] 2025-11-22 09:19:59,327 | INFO     | sum of deviations: 343116040899.4997
[2025-11-22 10:20:54] 2025-11-22 09:19:59,327 | INFO     | mean x: 1763781218.5
[2025-11-22 10:20:54] 2025-11-22 09:19:59,327 | INFO     | mean y: 2022897.2323943663
[2025-11-22 10:20:54] 2025-11-22 09:19:59,327 | INFO     | intersect: -5450947339.197269
[2025-11-22 10:20:54] 2025-11-22 09:19:59,328 | INFO     | chi2: 2.2057122631521664
[2025-11-22 10:20:54] 2025-11-22 09:19:59,328 | INFO     | current chi2=2.2057122631521664 (change=24.141341689504024 %)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,328 | INFO     | right removable region: 709
[2025-11-22 10:20:54] 2025-11-22 09:19:59,328 | INFO     | sum of square deviations: 110982015757.5
[2025-11-22 10:20:54] 2025-11-22 09:19:59,333 | INFO     | sum of deviations: 156747042558.50003
[2025-11-22 10:20:54] 2025-11-22 09:19:59,333 | INFO     | mean x: 1763781523.5
[2025-11-22 10:20:54] 2025-11-22 09:19:59,334 | INFO     | mean y: 2027549.7507042254
[2025-11-22 10:20:54] 2025-11-22 09:19:59,334 | INFO     | intersect: -2489074595.4116507
[2025-11-22 10:20:54] 2025-11-22 09:19:59,334 | INFO     | chi2: 0.9794368751503859
[2025-11-22 10:20:54] 2025-11-22 09:19:59,334 | INFO     | current chi2=0.9794368751503859 (change=66.31529484151608 %)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,334 | INFO     | sum of square deviations: 108653795360.0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,340 | INFO     | sum of deviations: 121655747659.00003
[2025-11-22 10:20:54] 2025-11-22 09:19:59,340 | INFO     | mean x: 1763781676.0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,340 | INFO     | mean y: 2029840.5758865247
[2025-11-22 10:20:54] 2025-11-22 09:19:59,340 | INFO     | intersect: -1972813079.4535584
[2025-11-22 10:20:54] 2025-11-22 09:19:59,340 | INFO     | chi2: 0.7574446875149748
[2025-11-22 10:20:54] 2025-11-22 09:19:59,340 | INFO     | current chi2=0.7574446875149748 (change=22.665287908557215 %)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,340 | INFO     | left removable region: 20
[2025-11-22 10:20:54] 2025-11-22 09:19:59,341 | INFO     | sum of square deviations: 101422701640.0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,345 | INFO     | sum of deviations: 165495158484.99994
[2025-11-22 10:20:54] 2025-11-22 09:19:59,345 | INFO     | mean x: 1763781798.0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,345 | INFO     | mean y: 2034442.7605224964
[2025-11-22 10:20:54] 2025-11-22 09:19:59,345 | INFO     | intersect: -2875993291.395664
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | chi2: 0.05216865465824486
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | current memory leak: 1.63 B/s (using 689 data points, chi2=0.05)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | could have reported an average CPU frequency of 4444 MHz (28 samples)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | ..............................
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . Timing measurements:
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . get job = 0 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . initial setup = 1 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . payload setup = 7 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . stage-in = 0 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . payload execution = 43592 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . stage-out = 1 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | . log creation = 0 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,346 | INFO     | ..............................
[2025-11-22 10:20:54] 2025-11-22 09:19:59,698 | INFO     | 
[2025-11-22 10:20:54] 2025-11-22 09:19:59,698 | INFO     | job summary report
[2025-11-22 10:20:54] 2025-11-22 09:19:59,698 | INFO     | --------------------------------------------------
[2025-11-22 10:20:54] 2025-11-22 09:19:59,699 | INFO     | PanDA job id: 6892528207
[2025-11-22 10:20:54] 2025-11-22 09:19:59,699 | INFO     | task id: 47493029
[2025-11-22 10:20:54] 2025-11-22 09:19:59,699 | INFO     | errors: (none)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 10:20:54] 2025-11-22 09:19:59,699 | INFO     | pilot state: finished 
[2025-11-22 10:20:54] 2025-11-22 09:19:59,699 | INFO     | transexitcode: 0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,700 | INFO     | exeerrorcode: 0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,700 | INFO     | exeerrordiag: 
[2025-11-22 10:20:54] 2025-11-22 09:19:59,700 | INFO     | exitcode: 0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,700 | INFO     | exitmsg: OK
[2025-11-22 10:20:54] 2025-11-22 09:19:59,700 | INFO     | cpuconsumptiontime: 86362 s
[2025-11-22 10:20:54] 2025-11-22 09:19:59,700 | INFO     | nevents: 1000
[2025-11-22 10:20:54] 2025-11-22 09:19:59,700 | INFO     | neventsw: 0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,701 | INFO     | pid: 2397035
[2025-11-22 10:20:54] 2025-11-22 09:19:59,701 | INFO     | pgrp: 2397035
[2025-11-22 10:20:54] 2025-11-22 09:19:59,701 | INFO     | corecount: 2
[2025-11-22 10:20:54] 2025-11-22 09:19:59,701 | INFO     | event service: False
[2025-11-22 10:20:54] 2025-11-22 09:19:59,701 | INFO     | sizes: {0: 2298799, 7: 2299061, 11: 2299089, 43602: 2345019, 43604: 2354019, 43607: 2354075, 43615: 2354449}
[2025-11-22 10:20:54] 2025-11-22 09:19:59,701 | INFO     | --------------------------------------------------
[2025-11-22 10:20:54] 2025-11-22 09:19:59,701 | INFO     | 
[2025-11-22 10:20:54] 2025-11-22 09:19:59,702 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | job 6892528207 has completed (purged errors)
[2025-11-22 10:20:54] 2025-11-22 09:19:59,714 | INFO     | overall cleanup function is called
[2025-11-22 10:20:54] 2025-11-22 09:20:00,721 | INFO     | --- collectZombieJob: --- 10, [2397035]
[2025-11-22 10:20:54] 2025-11-22 09:20:00,722 | INFO     | zombie collector waiting for pid 2397035
[2025-11-22 10:20:54] 2025-11-22 09:20:00,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 10:20:54] 2025-11-22 09:20:00,722 | INFO     | collected zombie processes
[2025-11-22 10:20:54] 2025-11-22 09:20:00,722 | INFO     | will attempt to kill all subprocesses of pid=2397035
[2025-11-22 10:20:54] 2025-11-22 09:20:00,754 | INFO     | process IDs to be killed: [2397035] (in reverse order)
[2025-11-22 10:20:54] 2025-11-22 09:20:00,775 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 10:20:54] 2025-11-22 09:20:00,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 10:20:54] 2025-11-22 09:20:00,776 | INFO     | did not find any defunct processes belonging to 2397035
[2025-11-22 10:20:54] 2025-11-22 09:20:00,777 | INFO     | did not find any defunct processes belonging to 2397035
[2025-11-22 10:20:54] 2025-11-22 09:20:00,777 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 10:20:54] 2025-11-22 09:20:00,777 | INFO     | ready for new job
[2025-11-22 10:20:54] 2025-11-22 09:20:00,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 10:20:54] 2025-11-22 09:20:00,779 | INFO     | ***************************************
[2025-11-22 10:20:54] 2025-11-22 09:20:00,779 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 10:20:54] 2025-11-22 09:20:00,779 | INFO     | ***************************************
[2025-11-22 10:20:54] 2025-11-22 09:20:00,779 | INFO     | 
[2025-11-22 10:20:54] 2025-11-22 09:20:00,779 | INFO     | architecture information:
[2025-11-22 10:20:54] 2025-11-22 09:20:00,779 | INFO     | executing command: cat /etc/os-release
[2025-11-22 10:20:54] 2025-11-22 09:20:00,788 | INFO     | cat /etc/os-release:
[2025-11-22 10:20:54] NAME="CentOS Linux"
[2025-11-22 10:20:54] VERSION="7 (Core)"
[2025-11-22 10:20:54] ID="centos"
[2025-11-22 10:20:54] ID_LIKE="rhel fedora"
[2025-11-22 10:20:54] VERSION_ID="7"
[2025-11-22 10:20:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 10:20:54] ANSI_COLOR="0;31"
[2025-11-22 10:20:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 10:20:54] HOME_URL="https://www.centos.org/"
[2025-11-22 10:20:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 10:20:54] 
[2025-11-22 10:20:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 10:20:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 10:20:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 10:20:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 10:20:54] 
[2025-11-22 10:20:54] 2025-11-22 09:20:00,788 | INFO     | ***************************************
[2025-11-22 10:20:54] 2025-11-22 09:20:01,290 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | INFO     | sufficient remaining disk space (324914905088 B)
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | INFO     | update_server=False
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | INFO     | aborting loop
[2025-11-22 10:20:54] 2025-11-22 09:20:01,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 10:20:54] 2025-11-22 09:20:01,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 10:20:54] 2025-11-22 09:20:01,788 | INFO     | all payload control threads have been joined
[2025-11-22 10:20:54] 2025-11-22 09:20:01,968 | INFO     | all data control threads have been joined
[2025-11-22 10:20:54] 2025-11-22 09:20:02,306 | INFO     | [job] retrieve thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:02,307 | INFO     | [job] queue monitor thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:02,307 | INFO     | [job] job monitor thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:02,522 | INFO     | [payload] failed_post thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:02,793 | INFO     | [payload] control thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:02,850 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:02,855 | INFO     | [data] copytool_in thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:02,875 | INFO     | all job control threads have been joined
[2025-11-22 10:20:54] 2025-11-22 09:20:02,971 | INFO     | [data] control thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:03,306 | INFO     | [data] copytool_out thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:03,484 | INFO     | [job] validate thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:03,512 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:03,539 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:03,879 | INFO     | [payload] validate_post thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:03,881 | INFO     | [job] control thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:05,740 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:12,316 | INFO     | job.realtimelogging is not enabled
[2025-11-22 10:20:54] 2025-11-22 09:20:13,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 10:20:54] 2025-11-22 09:20:31,153 | INFO     | PID=2390612 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 10:20:54] 2025-11-22 09:20:31,153 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 10:20:54] 2025-11-22 09:20:31,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 10:20:54] 2025-11-22 09:20:31,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 10:20:54] 2025-11-22 09:20:48,056 | INFO     | [monitor] cgroup control has ended
[2025-11-22 10:20:54] 2025-11-22 09:20:49,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854394263360)>', '<ExcThread(monitor, started 139853882693376)>']
[2025-11-22 10:20:54] 2025-11-22 09:20:50,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 10:20:54] 2025-11-22 09:20:50,255 | INFO     | [monitor] control thread has ended
[2025-11-22 10:20:54] 2025-11-22 09:20:54,475 | INFO     | all workflow threads have been joined
[2025-11-22 10:20:54] 2025-11-22 09:20:54,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 10:20:54] 2025-11-22 09:20:54,476 | INFO     | traces error code: 0
[2025-11-22 10:20:54] 2025-11-22 09:20:54,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 10:20:54] 2025-11-22 09:20:54,518 [wrapper] ==== pilot stdout END ====
[2025-11-22 10:20:54] 2025-11-22 09:20:54,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 10:20:54] 2025-11-22 09:20:54,524 [wrapper] pilotpid: 2390612
[2025-11-22 10:20:54] 2025-11-22 09:20:54,526 [wrapper] Pilot exit status: 0
[2025-11-22 10:20:54] 2025-11-22 09:20:54,532 [wrapper] pandaids: 6892528207
[2025-11-22 10:20:54] 2025-11-22 09:20:54,545 [wrapper] cleanup supervisor_pilot 2469834 2390613
[2025-11-22 10:20:54] 2025-11-22 09:20:54,547 [wrapper] Test setup, not cleaning
[2025-11-22 10:20:54] 2025-11-22 09:20:54,550 [wrapper] apfmon messages muted
[2025-11-22 10:20:54] 2025-11-22 09:20:54,551 [wrapper] ==== wrapper stdout END ====
[2025-11-22 10:20:54] 2025-11-22 09:20:54,553 [wrapper] ==== wrapper stderr END ====
[2025-11-22 10:20:54]  *** Error codes and diagnostics ***
[2025-11-22 10:20:54]     "exeErrorCode": 0,
[2025-11-22 10:20:54]     "exeErrorDiag": "",
[2025-11-22 10:20:54]     "pilotErrorCode": 0,
[2025-11-22 10:20:54]     "pilotErrorDiag": "",
[2025-11-22 10:20:54]  *** Listing of results directory ***
[2025-11-22 10:20:54] total 1303232
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:12 queuedata.json
[2025-11-22 10:20:54] -rwx------ 1 boinc boinc     36292 Nov 19 08:13 runpilot2-wrapper.sh
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc       100 Nov 21 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 10:20:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 22:12 run_atlas
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc       105 Nov 21 22:12 job.xml
[2025-11-22 10:20:54] -rw-r--r-- 2 boinc boinc 408848305 Nov 21 22:12 EVNT.47493027._000153.pool.root.1
[2025-11-22 10:20:54] -rw-r--r-- 2 boinc boinc    590096 Nov 21 22:12 input.tar.gz
[2025-11-22 10:20:54] -rw-r--r-- 2 boinc boinc     15120 Nov 21 22:12 start_atlas.sh
[2025-11-22 10:20:54] drwxrwx--x 2 boinc boinc      4096 Nov 21 22:12 shared
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:12 boinc_setup_complete
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc      6208 Nov 21 22:12 init_data.xml
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc         0 Nov 21 22:12 boinc_lockfile
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc      2773 Nov 21 22:12 pandaJob.out
[2025-11-22 10:20:54] -rw------- 1 boinc boinc    989798 Nov 21 22:12 agis_schedconf.cvmfs.json
[2025-11-22 10:20:54] drwx------ 5 boinc boinc      4096 Nov 21 22:12 pilot3
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc       532 Nov 22 10:16 boinc_task_state.xml
[2025-11-22 10:20:54] -rw------- 1 boinc boinc 907052017 Nov 22 10:19 HITS.47493029._001483.pool.root.1
[2025-11-22 10:20:54] -rw------- 1 boinc boinc      1022 Nov 22 10:19 memory_monitor_summary.json
[2025-11-22 10:20:54] -rw------- 1 boinc boinc   1526164 Nov 22 10:19 agis_ddmendpoints.agis.ALL.json
[2025-11-22 10:20:54] -rw------- 1 boinc boinc   1214861 Nov 22 10:19 log.47493029._001483.job.log.tgz.1
[2025-11-22 10:20:54] -rw------- 1 boinc boinc        95 Nov 22 10:19 pilot_heartbeat.json
[2025-11-22 10:20:54] -rw------- 1 boinc boinc      8565 Nov 22 10:19 heartbeat.json
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc        28 Nov 22 10:20 wrapper_checkpoint.txt
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc      8192 Nov 22 10:20 boinc_mmap_file
[2025-11-22 10:20:54] -rw------- 1 boinc boinc      4824 Nov 22 10:20 pilotlog.txt
[2025-11-22 10:20:54] -rw------- 1 boinc boinc   6126376 Nov 22 10:20 log.47493029._001483.job.log.1
[2025-11-22 10:20:54] -rw------- 1 boinc boinc       353 Nov 22 10:20 output.list
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc       620 Nov 22 10:20 runtime_log
[2025-11-22 10:20:54] -rw------- 1 boinc boinc   7362560 Nov 22 10:20 result.tar.gz
[2025-11-22 10:20:54] -rw------- 1 boinc boinc       669 Nov 22 10:20 yYqNDmQYrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYmGKDm4SprCn.diag
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc      8798 Nov 22 10:20 runtime_log.err
[2025-11-22 10:20:54] -rw-r--r-- 1 boinc boinc     21620 Nov 22 10:20 stderr.txt
[2025-11-22 10:20:54] HITS file was successfully produced:
[2025-11-22 10:20:54] -rw------- 1 boinc boinc 907052017 Nov 22 10:19 shared/HITS.pool.root.1
[2025-11-22 10:20:54]  *** Contents of shared directory: ***
[2025-11-22 10:20:54] total 1292860
[2025-11-22 10:20:54] -rw-r--r-- 2 boinc boinc 408848305 Nov 21 22:12 ATLAS.root_0
[2025-11-22 10:20:54] -rw-r--r-- 2 boinc boinc    590096 Nov 21 22:12 input.tar.gz
[2025-11-22 10:20:54] -rw-r--r-- 2 boinc boinc     15120 Nov 21 22:12 start_atlas.sh
[2025-11-22 10:20:54] -rw------- 1 boinc boinc 907052017 Nov 22 10:19 HITS.pool.root.1
[2025-11-22 10:20:54] -rw------- 1 boinc boinc   7362560 Nov 22 10:20 result.tar.gz
10:20:55 (2386903): run_atlas exited; CPU time 86479.946722
10:20:55 (2386903): called boinc_finish(0)

</stderr_txt>
]]>

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