Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:49:02 (3517930): wrapper (7.7.26015): starting
00:49:02 (3517930): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 00:49:02] Arguments: --nthreads 8
[2025-11-19 00:49:02] Threads: 8
[2025-11-19 00:49:02] Checking for CVMFS
[2025-11-19 00:49:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 00:49:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 00:49:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 00:49:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 00:49:02] 2.11.3.0 733561 18087 225008 153036 0 495 31823883 45568000 10174 130560 0 121981243 99.794 85375870 21452 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-19 00:49:02] CVMFS is ok
[2025-11-19 00:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 00:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 00:49:02] Further information can be found at the LHC@home message board.
[2025-11-19 00:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 00:49:02] Checking for apptainer binary...
[2025-11-19 00:49:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 00:49:02] Running /usr/bin/apptainer --version
[2025-11-19 00:49:02] apptainer version 1.4.1-1.el9
[2025-11-19 00:49:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 00:49:03] wns0024.triumf.lcg
[2025-11-19 00:49:03] apptainer works
[2025-11-19 00:49:03] Set ATHENA_PROC_NUMBER=8
[2025-11-19 00:49:03] Set ATHENA_CORE_NUMBER=8
[2025-11-19 00:49:03] Starting ATLAS job with PandaID=6892528460
[2025-11-19 00:49:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 00:55:43]  *** The last 200 lines of the pilot log: ***
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | INFO     | ..............................
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . Timing measurements:
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . get job = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . initial setup = 4 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . payload setup = 16 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . stage-in = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . payload execution = 118 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . stage-out = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . log creation = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | ..............................
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892528460/pilotlog.txt
[2025-11-19 00:55:43] 2025-11-19 08:54:39,354 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-19 00:55:43] - Log from pilotlog.txt -
[2025-11-19 00:55:43] 2025-11-19 08:54:39,335 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892528460/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | INFO     | extracted standard info from prmon json
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | WARNING  | wrong length of table data, x=[1763542249.0, 1763542310.0], y=[18257.0, 770733.0] (must be same and length>=4)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | INFO     | ..............................
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . Timing measurements:
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . get job = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . initial setup = 4 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . payload setup = 16 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . stage-in = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . payload execution = 118 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . stage-out = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . log creation = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | ..............................
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892528460/pilotlog.txt
[2025-11-19 00:55:43] 2025-11-19 08:54:39,354 | WARNING  | 
[2025-11-19 00:55:43] [begin log extracts]
[2025-11-19 00:55:43] - Log from pilotlog.txt -
[2025-11-19 00:55:43] 2025-11-19 08:54:39,335 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892528460/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | INFO     | extracted standard info from prmon json
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 00:55:43] 2025-11-19 08:54:39,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | WARNING  | wrong length of table data, x=[1763542249.0, 1763542310.0], y=[18257.0, 770733.0] (must be same and length>=4)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,337 | INFO     | ..............................
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . Timing measurements:
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . get job = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . initial setup = 4 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . payload setup = 16 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . stage-in = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . payload execution = 118 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . stage-out = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | . log creation = 0 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | ..............................
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 00:55:43] 2025-11-19 08:54:39,338 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892528460/pilotlog.txt
[2025-11-19 00:55:43] [end log extracts]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,354 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,355 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-19 00:55:43] 2025-11-19 08:54:39,423 | INFO     | 
[2025-11-19 00:55:43] 2025-11-19 08:54:39,424 | INFO     | job summary report
[2025-11-19 00:55:43] 2025-11-19 08:54:39,424 | INFO     | --------------------------------------------------
[2025-11-19 00:55:43] 2025-11-19 08:54:39,424 | INFO     | PanDA job id: 6892528460
[2025-11-19 00:55:43] 2025-11-19 08:54:39,424 | INFO     | task id: 47493029
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-19 00:52:26,111 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | pilot state: failed 
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | transexitcode: 65
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | exeerrorcode: 65
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | exitcode: 65
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | cpuconsumptiontime: 48 s
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | nevents: 0
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | neventsw: 0
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | pid: 3529581
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | pgrp: 3529581
[2025-11-19 00:55:43] 2025-11-19 08:54:39,425 | INFO     | corecount: 8
[2025-11-19 00:55:43] 2025-11-19 08:54:39,426 | INFO     | event service: False
[2025-11-19 00:55:43] 2025-11-19 08:54:39,426 | INFO     | sizes: {0: 2296372, 1: 2296970, 2: 2297253, 13: 2297253, 17: 2297571, 24: 2297599, 138: 2323280, 139: 2327598, 264: 2327736}
[2025-11-19 00:55:43] 2025-11-19 08:54:39,426 | INFO     | --------------------------------------------------
[2025-11-19 00:55:43] 2025-11-19 08:54:39,426 | INFO     | 
[2025-11-19 00:55:43] 2025-11-19 08:54:39,426 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-19 00:55:43] 2025-11-19 08:54:39,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 00:55:43] 2025-11-19 08:54:39,476 | INFO     | job 6892528460 has completed (purged errors)
[2025-11-19 00:55:43] 2025-11-19 08:54:39,476 | INFO     | overall cleanup function is called
[2025-11-19 00:55:43] 2025-11-19 08:54:40,485 | INFO     | --- collectZombieJob: --- 10, [3529581]
[2025-11-19 00:55:43] 2025-11-19 08:54:40,485 | INFO     | zombie collector waiting for pid 3529581
[2025-11-19 00:55:43] 2025-11-19 08:54:40,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 00:55:43] 2025-11-19 08:54:40,485 | INFO     | collected zombie processes
[2025-11-19 00:55:43] 2025-11-19 08:54:40,485 | INFO     | will attempt to kill all subprocesses of pid=3529581
[2025-11-19 00:55:43] 2025-11-19 08:54:41,158 | INFO     | process IDs to be killed: [3529581] (in reverse order)
[2025-11-19 00:55:43] 2025-11-19 08:54:41,214 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 00:55:43] 2025-11-19 08:54:41,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 00:55:43] 2025-11-19 08:54:41,243 | INFO     | did not find any defunct processes belonging to 3529581
[2025-11-19 00:55:43] 2025-11-19 08:54:41,263 | INFO     | did not find any defunct processes belonging to 3529581
[2025-11-19 00:55:43] 2025-11-19 08:54:41,264 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 00:55:43] 2025-11-19 08:54:41,265 | INFO     | ready for new job
[2025-11-19 00:55:43] 2025-11-19 08:54:41,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 00:55:43] 2025-11-19 08:54:41,267 | INFO     | ***************************************
[2025-11-19 00:55:43] 2025-11-19 08:54:41,267 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 00:55:43] 2025-11-19 08:54:41,267 | INFO     | ***************************************
[2025-11-19 00:55:43] 2025-11-19 08:54:41,267 | INFO     | 
[2025-11-19 00:55:43] 2025-11-19 08:54:41,269 | INFO     | architecture information:
[2025-11-19 00:55:43] 2025-11-19 08:54:41,269 | INFO     | executing command: cat /etc/os-release
[2025-11-19 00:55:43] 2025-11-19 08:54:41,283 | INFO     | cat /etc/os-release:
[2025-11-19 00:55:43] NAME="CentOS Linux"
[2025-11-19 00:55:43] VERSION="7 (Core)"
[2025-11-19 00:55:43] ID="centos"
[2025-11-19 00:55:43] ID_LIKE="rhel fedora"
[2025-11-19 00:55:43] VERSION_ID="7"
[2025-11-19 00:55:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 00:55:43] ANSI_COLOR="0;31"
[2025-11-19 00:55:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 00:55:43] HOME_URL="https://www.centos.org/"
[2025-11-19 00:55:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 00:55:43] 
[2025-11-19 00:55:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 00:55:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 00:55:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 00:55:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 00:55:43] 
[2025-11-19 00:55:43] 2025-11-19 08:54:41,283 | INFO     | ***************************************
[2025-11-19 00:55:43] 2025-11-19 08:54:41,791 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-19 00:55:43] 2025-11-19 08:54:41,934 | INFO     | sufficient remaining disk space (1383546748928 B)
[2025-11-19 00:55:43] 2025-11-19 08:54:41,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 00:55:43] 2025-11-19 08:54:41,935 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 00:55:43] 2025-11-19 08:54:41,935 | INFO     | update_server=False
[2025-11-19 00:55:43] 2025-11-19 08:54:41,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 00:55:43] 2025-11-19 08:54:42,391 | INFO     | all payload control threads have been joined
[2025-11-19 00:55:43] 2025-11-19 08:54:42,394 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-19 00:55:43] 2025-11-19 08:54:42,394 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-19 00:55:43] 2025-11-19 08:54:42,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 00:55:43] 2025-11-19 08:54:42,394 | INFO     | will abort loop
[2025-11-19 00:55:43] 2025-11-19 08:54:42,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 00:55:43] 2025-11-19 08:54:42,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 00:55:43] 2025-11-19 08:54:42,916 | INFO     | all data control threads have been joined
[2025-11-19 00:55:43] 2025-11-19 08:54:42,941 | INFO     | [job] retrieve thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:42,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,081 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,400 | INFO     | [job] job monitor thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,401 | INFO     | [payload] control thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,417 | INFO     | [payload] failed_post thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,483 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,636 | INFO     | all job control threads have been joined
[2025-11-19 00:55:43] 2025-11-19 08:54:43,701 | INFO     | [job] validate thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,826 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:43,922 | INFO     | [data] control thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:44,104 | INFO     | [data] copytool_in thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:44,245 | INFO     | [payload] validate_post thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:44,435 | INFO     | [data] copytool_out thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:44,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 00:55:43] 2025-11-19 08:54:44,642 | INFO     | [job] control thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:45,451 | INFO     | [job] queue monitor thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:54:46,449 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 00:55:43] 2025-11-19 08:55:11,915 | INFO     | PID=3521662 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-19 00:55:43] 2025-11-19 08:55:11,915 | INFO     | .. there are 19 such processes running
[2025-11-19 00:55:43] 2025-11-19 08:55:11,915 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 00:55:43] 2025-11-19 08:55:11,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 00:55:43] 2025-11-19 08:55:11,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 00:55:43] 2025-11-19 08:55:36,389 | INFO     | [monitor] cgroup control has ended
[2025-11-19 00:55:43] 2025-11-19 08:55:36,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963912124224)>', '<ExcThread(monitor, started 139963236603648)>']
[2025-11-19 00:55:43] 2025-11-19 08:55:37,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 00:55:43] 2025-11-19 08:55:37,087 | INFO     | [monitor] control thread has ended
[2025-11-19 00:55:43] 2025-11-19 08:55:41,776 | INFO     | all workflow threads have been joined
[2025-11-19 00:55:43] 2025-11-19 08:55:41,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 00:55:43] 2025-11-19 08:55:41,776 | INFO     | traces error code: 0
[2025-11-19 00:55:43] 2025-11-19 08:55:41,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 00:55:43] 2025-11-19 08:55:42,011 [wrapper] ==== pilot stdout END ====
[2025-11-19 00:55:43] 2025-11-19 08:55:42,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 00:55:43] 2025-11-19 08:55:42,101 [wrapper] pilotpid: 3521662
[2025-11-19 00:55:43] 2025-11-19 08:55:42,129 [wrapper] Pilot exit status: 0
[2025-11-19 00:55:43] 2025-11-19 08:55:42,321 [wrapper] pandaids: 6892528460
[2025-11-19 00:55:43] 2025-11-19 08:55:42,396 [wrapper] cleanup supervisor_pilot 3521668 3521663
[2025-11-19 00:55:43] 2025-11-19 08:55:42,447 [wrapper] Test setup, not cleaning
[2025-11-19 00:55:43] 2025-11-19 08:55:42,489 [wrapper] apfmon messages muted
[2025-11-19 00:55:43] 2025-11-19 08:55:42,542 [wrapper] ==== wrapper stdout END ====
[2025-11-19 00:55:43] 2025-11-19 08:55:42,589 [wrapper] ==== wrapper stderr END ====
[2025-11-19 00:55:43]  *** Error codes and diagnostics ***
[2025-11-19 00:55:43]     "exeErrorCode": 65,
[2025-11-19 00:55:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-19 00:55:43]     "pilotErrorCode": 1305,
[2025-11-19 00:55:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-19 00:55:43]  *** Listing of results directory ***
[2025-11-19 00:55:43] total 404184
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc    576529 Nov 18 23:00 pilot3.tar.gz
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc      5112 Nov 18 23:12 queuedata.json
[2025-11-19 00:55:43] -rwx------. 1 boinc boinc     36292 Nov 18 23:13 runpilot2-wrapper.sh
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc       100 Nov 19 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 00:55:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 00:49 run_atlas
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc       105 Nov 19 00:49 job.xml
[2025-11-19 00:55:43] -rw-r--r--. 2 boinc boinc 409654716 Nov 19 00:49 EVNT.47493027._000170.pool.root.1
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc      6445 Nov 19 00:49 init_data.xml
[2025-11-19 00:55:43] -rw-r--r--. 2 boinc boinc     15120 Nov 19 00:49 start_atlas.sh
[2025-11-19 00:55:43] drwxrwx--x. 2 boinc boinc      4096 Nov 19 00:49 shared
[2025-11-19 00:55:43] -rw-r--r--. 2 boinc boinc    590101 Nov 19 00:49 input.tar.gz
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc         0 Nov 19 00:49 boinc_lockfile
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc      2773 Nov 19 00:49 pandaJob.out
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc    989279 Nov 19 00:49 agis_schedconf.cvmfs.json
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc   1525063 Nov 19 00:49 agis_ddmendpoints.agis.ALL.json
[2025-11-19 00:55:43] drwx------. 5 boinc boinc      4096 Nov 19 00:49 pilot3
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc       525 Nov 19 00:51 boinc_task_state.xml
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc      1007 Nov 19 00:52 memory_monitor_summary.json
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc     49651 Nov 19 00:52 log.47493029._001652.job.log.tgz.1
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc        95 Nov 19 00:54 pilot_heartbeat.json
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc     10336 Nov 19 00:54 heartbeat.json
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc        23 Nov 19 00:55 wrapper_checkpoint.txt
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc      5009 Nov 19 00:55 pilotlog.txt
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc    105358 Nov 19 00:55 log.47493029._001652.job.log.1
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc      8192 Nov 19 00:55 boinc_mmap_file
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc       186 Nov 19 00:55 output.list
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc       620 Nov 19 00:55 runtime_log
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc    174080 Nov 19 00:55 result.tar.gz
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc      8526 Nov 19 00:55 runtime_log.err
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc       644 Nov 19 00:55 rhoNDm1Yrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAzFKDmma5fgn.diag
[2025-11-19 00:55:43] -rw-r--r--. 1 boinc boinc     22393 Nov 19 00:55 stderr.txt
[2025-11-19 00:55:43] No HITS result produced
[2025-11-19 00:55:43]  *** Contents of shared directory: ***
[2025-11-19 00:55:43] total 400828
[2025-11-19 00:55:43] -rw-r--r--. 2 boinc boinc 409654716 Nov 19 00:49 ATLAS.root_0
[2025-11-19 00:55:43] -rw-r--r--. 2 boinc boinc     15120 Nov 19 00:49 start_atlas.sh
[2025-11-19 00:55:43] -rw-r--r--. 2 boinc boinc    590101 Nov 19 00:49 input.tar.gz
[2025-11-19 00:55:43] -rw-------. 1 boinc boinc    174080 Nov 19 00:55 result.tar.gz
00:55:44 (3517930): run_atlas exited; CPU time 53.025268
00:55:44 (3517930): called boinc_finish(0)

</stderr_txt>
]]>

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