Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:40:59 (1214585): wrapper (7.7.26015): starting
02:40:59 (1214585): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 02:40:59] Arguments: --nthreads 12
[2025-11-24 02:40:59] Threads: 12
[2025-11-24 02:40:59] Checking for CVMFS
[2025-11-24 02:40:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:40:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:40:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:40:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:40:59] 2.13.3.0 11850 3529 77236 153228 2 81 3409215 4097024 803 130560 0 2751782 99.990 119966 22024 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-24 02:40:59] CVMFS is ok
[2025-11-24 02:40:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:40:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:40:59] Further information can be found at the LHC@home message board.
[2025-11-24 02:40:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:40:59] Checking for apptainer binary...
[2025-11-24 02:40:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:40:59] Running /usr/bin/apptainer --version
[2025-11-24 02:40:59] apptainer version 1.4.4-1.el9
[2025-11-24 02:40:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:40:59] pckelar1.cern.ch
[2025-11-24 02:40:59] apptainer works
[2025-11-24 02:40:59] Set ATHENA_PROC_NUMBER=12
[2025-11-24 02:40:59] Set ATHENA_CORE_NUMBER=12
[2025-11-24 02:40:59] Starting ATLAS job with PandaID=6892526974
[2025-11-24 02:40:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 14:34:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 14:34:42] 2025-11-24 13:34:08,526 | INFO     | time since job start (42782s) is within the limit (172800.0s)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,386 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 14:34:42] 2025-11-24 13:34:09,392 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.735708333333
[2025-11-24 14:34:42] 2025-11-24 13:34:09,397 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6892526974/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,398 | INFO     | extracted standard info from prmon json
[2025-11-24 14:34:42] 2025-11-24 13:34:09,398 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 14:34:42] 2025-11-24 13:34:09,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 14:34:42] 2025-11-24 13:34:09,419 | INFO     | fitting pss+swap vs Time
[2025-11-24 14:34:42] 2025-11-24 13:34:09,420 | INFO     | sum of square deviations: 106815590673.3381
[2025-11-24 14:34:42] 2025-11-24 13:34:09,436 | INFO     | sum of deviations: 1435229277166.3435
[2025-11-24 14:34:42] 2025-11-24 13:34:09,437 | INFO     | mean x: 1763969840.9101284
[2025-11-24 14:34:42] 2025-11-24 13:34:09,437 | INFO     | mean y: 3637219.4022824536
[2025-11-24 14:34:42] 2025-11-24 13:34:09,437 | INFO     | intersect: -23697969856.432606
[2025-11-24 14:34:42] 2025-11-24 13:34:09,438 | INFO     | chi2: 4.972201114708212
[2025-11-24 14:34:42] 2025-11-24 13:34:09,439 | INFO     | sum of square deviations: 104546421779.16675
[2025-11-24 14:34:42] 2025-11-24 13:34:09,453 | INFO     | sum of deviations: 1685851606828.2488
[2025-11-24 14:34:42] 2025-11-24 13:34:09,453 | INFO     | mean x: 1763969688.4166667
[2025-11-24 14:34:42] 2025-11-24 13:34:09,453 | INFO     | mean y: 3654048.150862069
[2025-11-24 14:34:42] 2025-11-24 13:34:09,454 | INFO     | intersect: -28441041456.541756
[2025-11-24 14:34:42] 2025-11-24 13:34:09,454 | INFO     | chi2: 2.5436231205602127
[2025-11-24 14:34:42] 2025-11-24 13:34:09,454 | INFO     | current chi2=2.5436231205602127 (change=48.84311672277395 %)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,455 | INFO     | sum of square deviations: 102309625584.9349
[2025-11-24 14:34:42] 2025-11-24 13:34:09,464 | INFO     | sum of deviations: 1755375342751.6785
[2025-11-24 14:34:42] 2025-11-24 13:34:09,464 | INFO     | mean x: 1763969535.9232996
[2025-11-24 14:34:42] 2025-11-24 13:34:09,464 | INFO     | mean y: 3658776.5788712013
[2025-11-24 14:34:42] 2025-11-24 13:34:09,464 | INFO     | intersect: -30261613049.23094
[2025-11-24 14:34:42] 2025-11-24 13:34:09,465 | INFO     | chi2: 2.167890386327551
[2025-11-24 14:34:42] 2025-11-24 13:34:09,465 | INFO     | current chi2=2.167890386327551 (change=14.77155680790908 %)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,465 | INFO     | right removable region: 690
[2025-11-24 14:34:42] 2025-11-24 13:34:09,466 | INFO     | sum of square deviations: 104546117756.82774
[2025-11-24 14:34:42] 2025-11-24 13:34:09,474 | INFO     | sum of deviations: 1220217239578.1372
[2025-11-24 14:34:42] 2025-11-24 13:34:09,474 | INFO     | mean x: 1763969993.413793
[2025-11-24 14:34:42] 2025-11-24 13:34:09,475 | INFO     | mean y: 3651637.4022988505
[2025-11-24 14:34:42] 2025-11-24 13:34:09,475 | INFO     | intersect: -20584646065.517155
[2025-11-24 14:34:42] 2025-11-24 13:34:09,475 | INFO     | chi2: 3.1478230233547784
[2025-11-24 14:34:42] 2025-11-24 13:34:09,475 | INFO     | current chi2=3.1478230233547784 (change=36.69155871343903 %)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,476 | INFO     | sum of square deviations: 102309102697.96266
[2025-11-24 14:34:42] 2025-11-24 13:34:09,485 | INFO     | sum of deviations: 1153233158735.0498
[2025-11-24 14:34:42] 2025-11-24 13:34:09,485 | INFO     | mean x: 1763970145.9146166
[2025-11-24 14:34:42] 2025-11-24 13:34:09,485 | INFO     | mean y: 3656203.034732272
[2025-11-24 14:34:42] 2025-11-24 13:34:09,485 | INFO     | intersect: -19879900681.370914
[2025-11-24 14:34:42] 2025-11-24 13:34:09,486 | INFO     | chi2: 3.0918775038882202
[2025-11-24 14:34:42] 2025-11-24 13:34:09,486 | INFO     | current chi2=3.0918775038882202 (change=1.7772765194065592 %)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,486 | INFO     | left removable region: 20
[2025-11-24 14:34:42] 2025-11-24 13:34:09,487 | INFO     | sum of square deviations: 93262415247.91618
[2025-11-24 14:34:42] 2025-11-24 13:34:09,495 | INFO     | sum of deviations: 1360762946879.4143
[2025-11-24 14:34:42] 2025-11-24 13:34:09,495 | INFO     | mean x: 1763970115.4268656
[2025-11-24 14:34:42] 2025-11-24 13:34:09,495 | INFO     | mean y: 3686115.9880597014
[2025-11-24 14:34:42] 2025-11-24 13:34:09,495 | INFO     | intersect: -25733854200.70575
[2025-11-24 14:34:42] 2025-11-24 13:34:09,496 | INFO     | chi2: 0.2331473665114433
[2025-11-24 14:34:42] 2025-11-24 13:34:09,496 | INFO     | current memory leak: 14.59 B/s (using 670 data points, chi2=0.23)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | could have reported an average CPU frequency of 2806 MHz (27 samples)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | ..............................
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . Timing measurements:
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . get job = 0 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . initial setup = 1 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . payload setup = 5 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . stage-in = 0 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . payload execution = 42748 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . stage-out = 3 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | . log creation = 0 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,497 | INFO     | ..............................
[2025-11-24 14:34:42] 2025-11-24 13:34:09,956 | INFO     | 
[2025-11-24 14:34:42] 2025-11-24 13:34:09,956 | INFO     | job summary report
[2025-11-24 14:34:42] 2025-11-24 13:34:09,956 | INFO     | --------------------------------------------------
[2025-11-24 14:34:42] 2025-11-24 13:34:09,956 | INFO     | PanDA job id: 6892526974
[2025-11-24 14:34:42] 2025-11-24 13:34:09,956 | INFO     | task id: 47493029
[2025-11-24 14:34:42] 2025-11-24 13:34:09,957 | INFO     | errors: (none)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,957 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 14:34:42] 2025-11-24 13:34:09,957 | INFO     | pilot state: finished 
[2025-11-24 14:34:42] 2025-11-24 13:34:09,957 | INFO     | transexitcode: 0
[2025-11-24 14:34:42] 2025-11-24 13:34:09,957 | INFO     | exeerrorcode: 0
[2025-11-24 14:34:42] 2025-11-24 13:34:09,957 | INFO     | exeerrordiag: 
[2025-11-24 14:34:42] 2025-11-24 13:34:09,957 | INFO     | exitcode: 0
[2025-11-24 14:34:42] 2025-11-24 13:34:09,958 | INFO     | exitmsg: OK
[2025-11-24 14:34:42] 2025-11-24 13:34:09,958 | INFO     | cpuconsumptiontime: 500676 s
[2025-11-24 14:34:42] 2025-11-24 13:34:09,958 | INFO     | nevents: 1000
[2025-11-24 14:34:42] 2025-11-24 13:34:09,958 | INFO     | neventsw: 0
[2025-11-24 14:34:42] 2025-11-24 13:34:09,958 | INFO     | pid: 1225937
[2025-11-24 14:34:42] 2025-11-24 13:34:09,958 | INFO     | pgrp: 1225937
[2025-11-24 14:34:42] 2025-11-24 13:34:09,958 | INFO     | corecount: 12
[2025-11-24 14:34:42] 2025-11-24 13:34:09,959 | INFO     | event service: False
[2025-11-24 14:34:42] 2025-11-24 13:34:09,959 | INFO     | sizes: {0: 2298625, 1: 2298824, 4: 2299086, 11: 2299114, 42757: 2344130, 42758: 2344129, 42762: 2354098, 42763: 2354154, 42769: 2354400}
[2025-11-24 14:34:42] 2025-11-24 13:34:09,959 | INFO     | --------------------------------------------------
[2025-11-24 14:34:42] 2025-11-24 13:34:09,959 | INFO     | 
[2025-11-24 14:34:42] 2025-11-24 13:34:09,959 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-24 14:34:42] 2025-11-24 13:34:09,979 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,979 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,979 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,979 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,981 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 14:34:42] 2025-11-24 13:34:09,982 | INFO     | job 6892526974 has completed (purged errors)
[2025-11-24 14:34:42] 2025-11-24 13:34:09,982 | INFO     | overall cleanup function is called
[2025-11-24 14:34:42] 2025-11-24 13:34:11,000 | INFO     | --- collectZombieJob: --- 10, [1225937]
[2025-11-24 14:34:42] 2025-11-24 13:34:11,001 | INFO     | zombie collector waiting for pid 1225937
[2025-11-24 14:34:42] 2025-11-24 13:34:11,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 14:34:42] 2025-11-24 13:34:11,001 | INFO     | collected zombie processes
[2025-11-24 14:34:42] 2025-11-24 13:34:11,001 | INFO     | will attempt to kill all subprocesses of pid=1225937
[2025-11-24 14:34:42] 2025-11-24 13:34:11,187 | INFO     | process IDs to be killed: [1225937] (in reverse order)
[2025-11-24 14:34:42] 2025-11-24 13:34:11,246 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 14:34:42] 2025-11-24 13:34:11,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 14:34:42] 2025-11-24 13:34:11,254 | INFO     | did not find any defunct processes belonging to 1225937
[2025-11-24 14:34:42] 2025-11-24 13:34:11,261 | INFO     | did not find any defunct processes belonging to 1225937
[2025-11-24 14:34:42] 2025-11-24 13:34:11,262 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 14:34:42] 2025-11-24 13:34:11,263 | INFO     | ready for new job
[2025-11-24 14:34:42] 2025-11-24 13:34:11,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 14:34:42] 2025-11-24 13:34:11,266 | INFO     | ***************************************
[2025-11-24 14:34:42] 2025-11-24 13:34:11,266 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 14:34:42] 2025-11-24 13:34:11,266 | INFO     | ***************************************
[2025-11-24 14:34:42] 2025-11-24 13:34:11,266 | INFO     | 
[2025-11-24 14:34:42] 2025-11-24 13:34:11,268 | INFO     | architecture information:
[2025-11-24 14:34:42] 2025-11-24 13:34:11,268 | INFO     | executing command: cat /etc/os-release
[2025-11-24 14:34:42] 2025-11-24 13:34:11,283 | INFO     | cat /etc/os-release:
[2025-11-24 14:34:42] NAME="CentOS Linux"
[2025-11-24 14:34:42] VERSION="7 (Core)"
[2025-11-24 14:34:42] ID="centos"
[2025-11-24 14:34:42] ID_LIKE="rhel fedora"
[2025-11-24 14:34:42] VERSION_ID="7"
[2025-11-24 14:34:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 14:34:42] ANSI_COLOR="0;31"
[2025-11-24 14:34:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 14:34:42] HOME_URL="https://www.centos.org/"
[2025-11-24 14:34:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 14:34:42] 
[2025-11-24 14:34:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 14:34:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 14:34:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 14:34:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 14:34:42] 
[2025-11-24 14:34:42] 2025-11-24 13:34:11,284 | INFO     | ***************************************
[2025-11-24 14:34:42] 2025-11-24 13:34:11,786 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-24 14:34:42] 2025-11-24 13:34:11,803 | INFO     | sufficient remaining disk space (776068923392 B)
[2025-11-24 14:34:42] 2025-11-24 13:34:11,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 14:34:42] 2025-11-24 13:34:11,804 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 14:34:42] 2025-11-24 13:34:11,804 | INFO     | update_server=False
[2025-11-24 14:34:42] 2025-11-24 13:34:11,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 14:34:42] 2025-11-24 13:34:11,996 | INFO     | all job control threads have been joined
[2025-11-24 14:34:42] 2025-11-24 13:34:12,250 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 14:34:42] 2025-11-24 13:34:12,251 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 14:34:42] 2025-11-24 13:34:12,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:34:42] 2025-11-24 13:34:12,251 | INFO     | will abort loop
[2025-11-24 14:34:42] 2025-11-24 13:34:12,478 | INFO     | all data control threads have been joined
[2025-11-24 14:34:42] 2025-11-24 13:34:12,809 | INFO     | [job] retrieve thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:12,883 | INFO     | all payload control threads have been joined
[2025-11-24 14:34:42] 2025-11-24 13:34:12,999 | INFO     | [job] control thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,063 | INFO     | [payload] failed_post thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 14:34:42] 2025-11-24 13:34:13,256 | INFO     | [job] job monitor thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,338 | INFO     | [data] copytool_in thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,483 | INFO     | [data] control thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,582 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,676 | INFO     | [payload] validate_post thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,838 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,839 | INFO     | [job] validate thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,888 | INFO     | [payload] control thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:13,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:14,062 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:14,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 14:34:42] 2025-11-24 13:34:14,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:34:42] 2025-11-24 13:34:15,252 | INFO     | [data] copytool_out thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:15,582 | INFO     | [job] queue monitor thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:16,994 | INFO     | [monitor] cgroup control has ended
[2025-11-24 14:34:42] 2025-11-24 13:34:18,112 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 14:34:42] 2025-11-24 13:34:18,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821959767872)>', '<ExcThread(monitor, started 139821234247424)>']
[2025-11-24 14:34:42] 2025-11-24 13:34:23,952 | INFO     | all workflow threads have been joined
[2025-11-24 14:34:42] 2025-11-24 13:34:23,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 14:34:42] 2025-11-24 13:34:23,953 | INFO     | traces error code: 0
[2025-11-24 14:34:42] 2025-11-24 13:34:23,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 14:34:42] 2025-11-24 13:34:41,844 | INFO     | PID=1218427 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 14:34:42] 2025-11-24 13:34:41,845 | INFO     | .. there are 2 such processes running
[2025-11-24 14:34:42] 2025-11-24 13:34:41,846 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 14:34:42] 2025-11-24 13:34:41,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 14:34:42] 2025-11-24 13:34:41,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 14:34:42] 2025-11-24 13:34:41,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 14:34:42] 2025-11-24 13:34:41,846 | INFO     | [monitor] control thread has ended
[2025-11-24 14:34:42] 2025-11-24 13:34:41,959 [wrapper] ==== pilot stdout END ====
[2025-11-24 14:34:42] 2025-11-24 13:34:41,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 14:34:42] 2025-11-24 13:34:41,965 [wrapper] pilotpid: 1218427
[2025-11-24 14:34:42] 2025-11-24 13:34:41,968 [wrapper] Pilot exit status: 0
[2025-11-24 14:34:42] 2025-11-24 13:34:41,977 [wrapper] pandaids: 6892526974
[2025-11-24 14:34:42] 2025-11-24 13:34:42,015 [wrapper] cleanup supervisor_pilot 1451771 1218428
[2025-11-24 14:34:42] 2025-11-24 13:34:42,018 [wrapper] Test setup, not cleaning
[2025-11-24 14:34:42] 2025-11-24 13:34:42,021 [wrapper] apfmon messages muted
[2025-11-24 14:34:42] 2025-11-24 13:34:42,024 [wrapper] ==== wrapper stdout END ====
[2025-11-24 14:34:42] 2025-11-24 13:34:42,027 [wrapper] ==== wrapper stderr END ====
[2025-11-24 14:34:42]  *** Error codes and diagnostics ***
[2025-11-24 14:34:42]     "exeErrorCode": 0,
[2025-11-24 14:34:42]     "exeErrorDiag": "",
[2025-11-24 14:34:42]     "pilotErrorCode": 0,
[2025-11-24 14:34:42]     "pilotErrorDiag": "",
[2025-11-24 14:34:42]  *** Listing of results directory ***
[2025-11-24 14:34:42] total 1316596
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:10 queuedata.json
[2025-11-24 14:34:42] -rwx------ 1 boinc boinc     36292 Nov 19 08:10 runpilot2-wrapper.sh
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc       100 Nov 24 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 14:34:42] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 02:40 run_atlas
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc       105 Nov 24 02:40 job.xml
[2025-11-24 14:34:42] -rw-r--r-- 2 boinc boinc 409833451 Nov 24 02:40 EVNT.47493027._000122.pool.root.1
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc      6295 Nov 24 02:40 init_data.xml
[2025-11-24 14:34:42] drwxrwx--x 2 boinc boinc        68 Nov 24 02:40 shared
[2025-11-24 14:34:42] -rw-r--r-- 2 boinc boinc    590101 Nov 24 02:40 input.tar.gz
[2025-11-24 14:34:42] -rw-r--r-- 2 boinc boinc     15120 Nov 24 02:40 start_atlas.sh
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc         0 Nov 24 02:40 boinc_lockfile
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc      2773 Nov 24 02:40 pandaJob.out
[2025-11-24 14:34:42] -rw------- 1 boinc boinc    989786 Nov 24 02:41 agis_schedconf.cvmfs.json
[2025-11-24 14:34:42] drwx------ 5 boinc boinc      4096 Nov 24 02:41 pilot3
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc       533 Nov 24 14:23 boinc_task_state.xml
[2025-11-24 14:34:42] -rw------- 1 boinc boinc 917589117 Nov 24 14:33 HITS.47493029._001175.pool.root.1
[2025-11-24 14:34:42] -rw------- 1 boinc boinc      1037 Nov 24 14:33 memory_monitor_summary.json
[2025-11-24 14:34:42] -rw------- 1 boinc boinc   1516227 Nov 24 14:34 agis_ddmendpoints.agis.ALL.json
[2025-11-24 14:34:42] -rw------- 1 boinc boinc   2388324 Nov 24 14:34 log.47493029._001175.job.log.tgz.1
[2025-11-24 14:34:42] -rw------- 1 boinc boinc      8610 Nov 24 14:34 heartbeat.json
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc        29 Nov 24 14:34 wrapper_checkpoint.txt
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc      8192 Nov 24 14:34 boinc_mmap_file
[2025-11-24 14:34:42] -rw------- 1 boinc boinc        95 Nov 24 14:34 pilot_heartbeat.json
[2025-11-24 14:34:42] -rw------- 1 boinc boinc       822 Nov 24 14:34 pilotlog.txt
[2025-11-24 14:34:42] -rw------- 1 boinc boinc   6045777 Nov 24 14:34 log.47493029._001175.job.log.1
[2025-11-24 14:34:42] -rw------- 1 boinc boinc       353 Nov 24 14:34 output.list
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc       620 Nov 24 14:34 runtime_log
[2025-11-24 14:34:42] -rw------- 1 boinc boinc   8458240 Nov 24 14:34 result.tar.gz
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc      8728 Nov 24 14:34 runtime_log.err
[2025-11-24 14:34:42] -rw------- 1 boinc boinc       665 Nov 24 14:34 ETPKDm3Vrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvwFKDm9sQKQn.diag
[2025-11-24 14:34:42] -rw-r--r-- 1 boinc boinc     21316 Nov 24 14:34 stderr.txt
[2025-11-24 14:34:42] HITS file was successfully produced:
[2025-11-24 14:34:42] -rw------- 1 boinc boinc 917589117 Nov 24 14:33 shared/HITS.pool.root.1
[2025-11-24 14:34:42]  *** Contents of shared directory: ***
[2025-11-24 14:34:42] total 1305168
[2025-11-24 14:34:42] -rw-r--r-- 2 boinc boinc 409833451 Nov 24 02:40 ATLAS.root_0
[2025-11-24 14:34:42] -rw-r--r-- 2 boinc boinc    590101 Nov 24 02:40 input.tar.gz
[2025-11-24 14:34:42] -rw-r--r-- 2 boinc boinc     15120 Nov 24 02:40 start_atlas.sh
[2025-11-24 14:34:42] -rw------- 1 boinc boinc 917589117 Nov 24 14:33 HITS.pool.root.1
[2025-11-24 14:34:42] -rw------- 1 boinc boinc   8458240 Nov 24 14:34 result.tar.gz
14:34:43 (1214585): run_atlas exited; CPU time 500959.887332
14:34:43 (1214585): called boinc_finish(0)

</stderr_txt>
]]>

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