Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:11:10 (2829939): wrapper (7.7.26015): starting
00:11:10 (2829939): wrapper: running run_atlas (--nthreads 12)
[2025-11-19 00:11:10] Arguments: --nthreads 12
[2025-11-19 00:11:10] Threads: 12
[2025-11-19 00:11:10] Checking for CVMFS
[2025-11-19 00:11:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 00:11:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 00:11:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 00:11:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 00:11:10] 2.11.5.0 2229122 17938 261184 153035 1 508 39701097 45568000 13108 130560 0 176535679 99.809 106331404 27257 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-19 00:11:10] CVMFS is ok
[2025-11-19 00:11:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 00:11:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 00:11:10] Further information can be found at the LHC@home message board.
[2025-11-19 00:11:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 00:11:10] Checking for apptainer binary...
[2025-11-19 00:11:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 00:11:10] Running /usr/bin/apptainer --version
[2025-11-19 00:11:10] apptainer version 1.4.1-1.el9
[2025-11-19 00:11:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 00:11:11] wns0038.triumf.lcg
[2025-11-19 00:11:11] apptainer works
[2025-11-19 00:11:11] Set ATHENA_PROC_NUMBER=12
[2025-11-19 00:11:11] Set ATHENA_CORE_NUMBER=12
[2025-11-19 00:11:11] Starting ATLAS job with PandaID=6892524052
[2025-11-19 00:11:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 00:15:27]  *** The last 200 lines of the pilot log: ***
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | wrong length of table data, x=[1763539907.0], y=[2091.0] (must be same and length>=4)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | could have reported an average CPU frequency of 2490 MHz (4 samples)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | ..............................
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . Timing measurements:
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . get job = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . initial setup = 2 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . payload setup = 5 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . stage-in = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . payload execution = 60 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . stage-out = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . log creation = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | ..............................
[2025-11-19 00:15:27] 2025-11-19 08:14:48,423 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 00:15:27] 2025-11-19 08:14:48,423 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892524052/pilotlog.txt
[2025-11-19 00:15:27] 2025-11-19 08:14:48,433 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-19 00:15:27] - Log from pilotlog.txt -
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892524052/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | INFO     | extracted standard info from prmon json
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | wrong length of table data, x=[1763539907.0], y=[2091.0] (must be same and length>=4)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | could have reported an average CPU frequency of 2490 MHz (4 samples)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | ..............................
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . Timing measurements:
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . get job = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . initial setup = 2 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . payload setup = 5 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . stage-in = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . payload execution = 60 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . stage-out = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . log creation = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | ..............................
[2025-11-19 00:15:27] 2025-11-19 08:14:48,423 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 00:15:27] 2025-11-19 08:14:48,423 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892524052/pilotlog.txt
[2025-11-19 00:15:27] 2025-11-19 08:14:48,434 | WARNING  | 
[2025-11-19 00:15:27] [begin log extracts]
[2025-11-19 00:15:27] - Log from pilotlog.txt -
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892524052/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | INFO     | extracted standard info from prmon json
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 00:15:27] 2025-11-19 08:14:48,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 00:15:27] 2025-11-19 08:14:48,421 | WARNING  | wrong length of table data, x=[1763539907.0], y=[2091.0] (must be same and length>=4)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | could have reported an average CPU frequency of 2490 MHz (4 samples)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | ..............................
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . Timing measurements:
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . get job = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . initial setup = 2 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . payload setup = 5 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . stage-in = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . payload execution = 60 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . stage-out = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | . log creation = 0 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,422 | INFO     | ..............................
[2025-11-19 00:15:27] 2025-11-19 08:14:48,423 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 00:15:27] 2025-11-19 08:14:48,423 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892524052/pilotlog.txt
[2025-11-19 00:15:27] [end log extracts]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,434 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,434 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-19 00:15:27] 2025-11-19 08:14:48,885 | INFO     | 
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | job summary report
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | --------------------------------------------------
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | PanDA job id: 6892524052
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | task id: 47493029
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-19 00:12:38,719 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | pilot state: failed 
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | transexitcode: 65
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | exeerrorcode: 65
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | exitcode: 65
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | cpuconsumptiontime: 44 s
[2025-11-19 00:15:27] 2025-11-19 08:14:48,886 | INFO     | nevents: 0
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | neventsw: 0
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | pid: 2840135
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | pgrp: 2840135
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | corecount: 12
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | event service: False
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | sizes: {0: 2296368, 1: 2297221, 5: 2297483, 11: 2297539, 69: 2327213, 72: 2327213, 191: 2327507}
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | --------------------------------------------------
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | 
[2025-11-19 00:15:27] 2025-11-19 08:14:48,887 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-19 00:15:27] 2025-11-19 08:14:48,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | job 6892524052 has completed (purged errors)
[2025-11-19 00:15:27] 2025-11-19 08:14:48,902 | INFO     | overall cleanup function is called
[2025-11-19 00:15:27] 2025-11-19 08:14:49,910 | INFO     | --- collectZombieJob: --- 10, [2840135]
[2025-11-19 00:15:27] 2025-11-19 08:14:49,910 | INFO     | zombie collector waiting for pid 2840135
[2025-11-19 00:15:27] 2025-11-19 08:14:49,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 00:15:27] 2025-11-19 08:14:49,910 | INFO     | collected zombie processes
[2025-11-19 00:15:27] 2025-11-19 08:14:49,911 | INFO     | will attempt to kill all subprocesses of pid=2840135
[2025-11-19 00:15:27] 2025-11-19 08:14:50,074 | INFO     | process IDs to be killed: [2840135] (in reverse order)
[2025-11-19 00:15:27] 2025-11-19 08:14:50,141 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 00:15:27] 2025-11-19 08:14:50,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 00:15:27] 2025-11-19 08:14:50,149 | INFO     | did not find any defunct processes belonging to 2840135
[2025-11-19 00:15:27] 2025-11-19 08:14:50,157 | INFO     | did not find any defunct processes belonging to 2840135
[2025-11-19 00:15:27] 2025-11-19 08:14:50,158 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 00:15:27] 2025-11-19 08:14:50,158 | INFO     | ready for new job
[2025-11-19 00:15:27] 2025-11-19 08:14:50,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 00:15:27] 2025-11-19 08:14:50,159 | INFO     | ***************************************
[2025-11-19 00:15:27] 2025-11-19 08:14:50,160 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 00:15:27] 2025-11-19 08:14:50,160 | INFO     | ***************************************
[2025-11-19 00:15:27] 2025-11-19 08:14:50,160 | INFO     | 
[2025-11-19 00:15:27] 2025-11-19 08:14:50,162 | INFO     | architecture information:
[2025-11-19 00:15:27] 2025-11-19 08:14:50,162 | INFO     | executing command: cat /etc/os-release
[2025-11-19 00:15:27] 2025-11-19 08:14:50,176 | INFO     | cat /etc/os-release:
[2025-11-19 00:15:27] NAME="CentOS Linux"
[2025-11-19 00:15:27] VERSION="7 (Core)"
[2025-11-19 00:15:27] ID="centos"
[2025-11-19 00:15:27] ID_LIKE="rhel fedora"
[2025-11-19 00:15:27] VERSION_ID="7"
[2025-11-19 00:15:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 00:15:27] ANSI_COLOR="0;31"
[2025-11-19 00:15:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 00:15:27] HOME_URL="https://www.centos.org/"
[2025-11-19 00:15:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 00:15:27] 
[2025-11-19 00:15:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 00:15:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 00:15:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 00:15:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 00:15:27] 
[2025-11-19 00:15:27] 2025-11-19 08:14:50,176 | INFO     | ***************************************
[2025-11-19 00:15:27] 2025-11-19 08:14:50,678 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-19 00:15:27] 2025-11-19 08:14:50,693 | INFO     | sufficient remaining disk space (2049494220800 B)
[2025-11-19 00:15:27] 2025-11-19 08:14:50,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 00:15:27] 2025-11-19 08:14:50,694 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 00:15:27] 2025-11-19 08:14:50,694 | INFO     | update_server=False
[2025-11-19 00:15:27] 2025-11-19 08:14:50,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 00:15:27] 2025-11-19 08:14:50,926 | INFO     | all data control threads have been joined
[2025-11-19 00:15:27] 2025-11-19 08:14:51,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 00:15:27] 2025-11-19 08:14:51,124 | INFO     | aborting loop
[2025-11-19 00:15:27] 2025-11-19 08:14:51,152 | INFO     | all job control threads have been joined
[2025-11-19 00:15:27] 2025-11-19 08:14:51,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 00:15:27] 2025-11-19 08:14:51,699 | INFO     | [job] retrieve thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:51,742 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:51,759 | INFO     | [payload] failed_post thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:51,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:51,931 | INFO     | [data] control thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:51,947 | INFO     | [payload] validate_post thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:52,007 | INFO     | all payload control threads have been joined
[2025-11-19 00:15:27] 2025-11-19 08:14:52,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 00:15:27] 2025-11-19 08:14:52,128 | INFO     | [job] job monitor thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:52,157 | INFO     | [job] control thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:52,878 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:52,916 | INFO     | [data] copytool_in thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:52,945 | INFO     | [job] validate thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:53,012 | INFO     | [payload] control thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:53,140 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:53,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 00:15:27] 2025-11-19 08:14:53,615 | INFO     | [data] copytool_out thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:54,503 | INFO     | [job] queue monitor thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:14:56,127 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 00:15:27] 2025-11-19 08:15:21,283 | INFO     | [monitor] cgroup control has ended
[2025-11-19 00:15:27] 2025-11-19 08:15:21,707 | INFO     | PID=2833591 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-19 00:15:27] 2025-11-19 08:15:21,707 | INFO     | .. there are 20 such processes running
[2025-11-19 00:15:27] 2025-11-19 08:15:21,708 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 00:15:27] 2025-11-19 08:15:21,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 00:15:27] 2025-11-19 08:15:21,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 00:15:27] 2025-11-19 08:15:22,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381579626304)>', '<ExcThread(monitor, started 140381039605504)>']
[2025-11-19 00:15:27] 2025-11-19 08:15:22,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 00:15:27] 2025-11-19 08:15:22,713 | INFO     | [monitor] control thread has ended
[2025-11-19 00:15:27] 2025-11-19 08:15:27,054 | INFO     | all workflow threads have been joined
[2025-11-19 00:15:27] 2025-11-19 08:15:27,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 00:15:27] 2025-11-19 08:15:27,055 | INFO     | traces error code: 0
[2025-11-19 00:15:27] 2025-11-19 08:15:27,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 00:15:27] 2025-11-19 08:15:27,164 [wrapper] ==== pilot stdout END ====
[2025-11-19 00:15:27] 2025-11-19 08:15:27,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 00:15:27] 2025-11-19 08:15:27,170 [wrapper] pilotpid: 2833591
[2025-11-19 00:15:27] 2025-11-19 08:15:27,173 [wrapper] Pilot exit status: 0
[2025-11-19 00:15:27] 2025-11-19 08:15:27,185 [wrapper] pandaids: 6892524052
[2025-11-19 00:15:27] 2025-11-19 08:15:27,229 [wrapper] cleanup supervisor_pilot 2833597 2833592
[2025-11-19 00:15:27] 2025-11-19 08:15:27,232 [wrapper] Test setup, not cleaning
[2025-11-19 00:15:27] 2025-11-19 08:15:27,235 [wrapper] apfmon messages muted
[2025-11-19 00:15:27] 2025-11-19 08:15:27,238 [wrapper] ==== wrapper stdout END ====
[2025-11-19 00:15:27] 2025-11-19 08:15:27,240 [wrapper] ==== wrapper stderr END ====
[2025-11-19 00:15:27]  *** Error codes and diagnostics ***
[2025-11-19 00:15:27]     "exeErrorCode": 65,
[2025-11-19 00:15:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-19 00:15:27]     "pilotErrorCode": 1305,
[2025-11-19 00:15:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-19 00:15:27]  *** Listing of results directory ***
[2025-11-19 00:15:27] total 404124
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc    576529 Nov 18 23:00 pilot3.tar.gz
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc      5112 Nov 18 23:07 queuedata.json
[2025-11-19 00:15:27] -rwx------. 1 boinc boinc     36292 Nov 18 23:08 runpilot2-wrapper.sh
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc       100 Nov 19 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 00:15:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 00:11 run_atlas
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc       105 Nov 19 00:11 job.xml
[2025-11-19 00:15:27] -rw-r--r--. 2 boinc boinc 409616547 Nov 19 00:11 EVNT.47493027._000086.pool.root.1
[2025-11-19 00:15:27] drwxrwx--x. 2 boinc boinc      4096 Nov 19 00:11 shared
[2025-11-19 00:15:27] -rw-r--r--. 2 boinc boinc    590093 Nov 19 00:11 input.tar.gz
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc      6595 Nov 19 00:11 init_data.xml
[2025-11-19 00:15:27] -rw-r--r--. 2 boinc boinc     15120 Nov 19 00:11 start_atlas.sh
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc         0 Nov 19 00:11 boinc_lockfile
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc      2771 Nov 19 00:11 pandaJob.out
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc    992806 Nov 19 00:11 agis_schedconf.cvmfs.json
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc   1525063 Nov 19 00:11 agis_ddmendpoints.agis.ALL.json
[2025-11-19 00:15:27] drwx------. 5 boinc boinc      4096 Nov 19 00:11 pilot3
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc       524 Nov 19 00:12 boinc_task_state.xml
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc       980 Nov 19 00:12 memory_monitor_summary.json
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc     48040 Nov 19 00:12 log.47493029._000812.job.log.tgz.1
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc     10322 Nov 19 00:14 heartbeat.json
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc        95 Nov 19 00:15 pilot_heartbeat.json
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc      8192 Nov 19 00:15 boinc_mmap_file
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc        23 Nov 19 00:15 wrapper_checkpoint.txt
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc      4823 Nov 19 00:15 pilotlog.txt
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc     93881 Nov 19 00:15 log.47493029._000812.job.log.1
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc       186 Nov 19 00:15 output.list
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc       620 Nov 19 00:15 runtime_log
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc    163840 Nov 19 00:15 result.tar.gz
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc      8528 Nov 19 00:15 runtime_log.err
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc       647 Nov 19 00:15 jpxMDmJUrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmotFKDm5c9zLm.diag
[2025-11-19 00:15:27] -rw-r--r--. 1 boinc boinc     22393 Nov 19 00:15 stderr.txt
[2025-11-19 00:15:27] No HITS result produced
[2025-11-19 00:15:27]  *** Contents of shared directory: ***
[2025-11-19 00:15:27] total 400780
[2025-11-19 00:15:27] -rw-r--r--. 2 boinc boinc 409616547 Nov 19 00:11 ATLAS.root_0
[2025-11-19 00:15:27] -rw-r--r--. 2 boinc boinc    590093 Nov 19 00:11 input.tar.gz
[2025-11-19 00:15:27] -rw-r--r--. 2 boinc boinc     15120 Nov 19 00:11 start_atlas.sh
[2025-11-19 00:15:27] -rw-------. 1 boinc boinc    163840 Nov 19 00:15 result.tar.gz
00:15:28 (2829939): run_atlas exited; CPU time 41.724696
00:15:28 (2829939): called boinc_finish(0)

</stderr_txt>
]]>

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