Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:46:13 (3852743): wrapper (7.7.26015): starting
04:46:13 (3852743): wrapper: running run_atlas (--nthreads 2)
[2025-11-23 04:46:13] Arguments: --nthreads 2
[2025-11-23 04:46:13] Threads: 2
[2025-11-23 04:46:13] Checking for CVMFS
[2025-11-23 04:46:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 04:46:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 04:46:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 04:46:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 04:46:14] 2.9.2.0 3080669 6571 56880 153195 0 81 35383811 36864001 0 130560 0 2121458 99.892 393945 5665 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 04:46:14] CVMFS is ok
[2025-11-23 04:46:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 04:46:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 04:46:14] Further information can be found at the LHC@home message board.
[2025-11-23 04:46:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 04:46:14] Checking for apptainer binary...
[2025-11-23 04:46:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 04:46:14] Running /usr/bin/apptainer --version
[2025-11-23 04:46:14] apptainer version 1.4.2-1.1
[2025-11-23 04:46:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 04:46:14] itA173
[2025-11-23 04:46:14] apptainer works
[2025-11-23 04:46:14] Set ATHENA_PROC_NUMBER=2
[2025-11-23 04:46:14] Set ATHENA_CORE_NUMBER=2
[2025-11-23 04:46:14] Starting ATLAS job with PandaID=6892522913
[2025-11-23 04:46:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 17:03:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 17:03:37] 2025-11-23 16:02:43,706 | INFO     | PID=3856450 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 17:03:37] 2025-11-23 16:02:44,507 | INFO     | monitor loop #3367: job 0:6892522913 is in state 'finished'
[2025-11-23 17:03:37] 2025-11-23 16:02:44,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:03:37] 2025-11-23 16:02:44,707 | INFO     | time since job start (44177s) is within the limit (172800.0s)
[2025-11-23 17:03:37] 2025-11-23 16:02:46,716 | INFO     | time since job start (44179s) is within the limit (172800.0s)
[2025-11-23 17:03:37] 2025-11-23 16:02:47,013 | INFO     | monitor loop #3368: job 0:6892522913 is in state 'finished'
[2025-11-23 17:03:37] 2025-11-23 16:02:47,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:03:37] 2025-11-23 16:02:48,722 | INFO     | time since job start (44181s) is within the limit (172800.0s)
[2025-11-23 17:03:37] 2025-11-23 16:02:49,517 | INFO     | monitor loop #3369: job 0:6892522913 is in state 'finished'
[2025-11-23 17:03:37] 2025-11-23 16:02:49,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,275 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 17:03:37] 2025-11-23 16:02:50,276 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3901.115875
[2025-11-23 17:03:37] 2025-11-23 16:02:50,276 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6892522913/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,277 | INFO     | extracted standard info from prmon json
[2025-11-23 17:03:37] 2025-11-23 16:02:50,277 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 17:03:37] 2025-11-23 16:02:50,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 17:03:37] 2025-11-23 16:02:50,281 | INFO     | fitting pss+swap vs Time
[2025-11-23 17:03:37] 2025-11-23 16:02:50,281 | INFO     | sum of square deviations: 117677462225.0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,286 | INFO     | sum of deviations: 284601499136.50006
[2025-11-23 17:03:37] 2025-11-23 16:02:50,286 | INFO     | mean x: 1763891667.5
[2025-11-23 17:03:37] 2025-11-23 16:02:50,286 | INFO     | mean y: 2012693.208563536
[2025-11-23 17:03:37] 2025-11-23 16:02:50,286 | INFO     | intersect: -4263937671.3994193
[2025-11-23 17:03:37] 2025-11-23 16:02:50,287 | INFO     | chi2: 2.8507541122613644
[2025-11-23 17:03:37] 2025-11-23 16:02:50,287 | INFO     | sum of square deviations: 115256188920.0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,292 | INFO     | sum of deviations: 342108586036.0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,292 | INFO     | mean x: 1763891515.0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,292 | INFO     | mean y: 2016302.5187760778
[2025-11-23 17:03:37] 2025-11-23 16:02:50,292 | INFO     | intersect: -5233645554.53257
[2025-11-23 17:03:37] 2025-11-23 16:02:50,293 | INFO     | chi2: 2.1495450298425545
[2025-11-23 17:03:37] 2025-11-23 16:02:50,293 | INFO     | current chi2=2.1495450298425545 (change=24.59731898317161 %)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,293 | INFO     | right removable region: 718
[2025-11-23 17:03:37] 2025-11-23 16:02:50,293 | INFO     | sum of square deviations: 115256188920.0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,298 | INFO     | sum of deviations: 155132649346.00003
[2025-11-23 17:03:37] 2025-11-23 16:02:50,298 | INFO     | mean x: 1763891820.0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,298 | INFO     | mean y: 2020838.1682892907
[2025-11-23 17:03:37] 2025-11-23 16:02:50,298 | INFO     | intersect: -2372144174.2309237
[2025-11-23 17:03:37] 2025-11-23 16:02:50,298 | INFO     | chi2: 0.9462293808764314
[2025-11-23 17:03:37] 2025-11-23 16:02:50,298 | INFO     | current chi2=0.9462293808764314 (change=66.80775178726888 %)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,299 | INFO     | sum of square deviations: 112868358102.5
[2025-11-23 17:03:37] 2025-11-23 16:02:50,304 | INFO     | sum of deviations: 128901766066.00005
[2025-11-23 17:03:37] 2025-11-23 16:02:50,304 | INFO     | mean x: 1763891972.5
[2025-11-23 17:03:37] 2025-11-23 16:02:50,304 | INFO     | mean y: 2022507.218487395
[2025-11-23 17:03:37] 2025-11-23 16:02:50,304 | INFO     | intersect: -2012437472.7734976
[2025-11-23 17:03:37] 2025-11-23 16:02:50,304 | INFO     | chi2: 0.7709019185737922
[2025-11-23 17:03:37] 2025-11-23 16:02:50,304 | INFO     | current chi2=0.7709019185737922 (change=18.529065557047556 %)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,304 | INFO     | left removable region: 20
[2025-11-23 17:03:37] 2025-11-23 16:02:50,305 | INFO     | sum of square deviations: 105449324114.5
[2025-11-23 17:03:37] 2025-11-23 16:02:50,309 | INFO     | sum of deviations: 176264758871.0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,309 | INFO     | mean x: 1763892094.5
[2025-11-23 17:03:37] 2025-11-23 16:02:50,309 | INFO     | mean y: 2026860.9914040114
[2025-11-23 17:03:37] 2025-11-23 16:02:50,309 | INFO     | intersect: -2946422712.510918
[2025-11-23 17:03:37] 2025-11-23 16:02:50,309 | INFO     | chi2: 0.06722796127434491
[2025-11-23 17:03:37] 2025-11-23 16:02:50,309 | INFO     | current memory leak: 1.67 B/s (using 698 data points, chi2=0.07)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | could have reported an average CPU frequency of 4505 MHz (28 samples)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | ..............................
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . Timing measurements:
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . get job = 0 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . initial setup = 1 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . payload setup = 7 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . stage-in = 0 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . payload execution = 44142 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . stage-out = 1 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | . log creation = 0 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,310 | INFO     | ..............................
[2025-11-23 17:03:37] 2025-11-23 16:02:50,728 | INFO     | time since job start (44183s) is within the limit (172800.0s)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,807 | INFO     | 
[2025-11-23 17:03:37] 2025-11-23 16:02:50,807 | INFO     | job summary report
[2025-11-23 17:03:37] 2025-11-23 16:02:50,807 | INFO     | --------------------------------------------------
[2025-11-23 17:03:37] 2025-11-23 16:02:50,807 | INFO     | PanDA job id: 6892522913
[2025-11-23 17:03:37] 2025-11-23 16:02:50,808 | INFO     | task id: 47493029
[2025-11-23 17:03:37] 2025-11-23 16:02:50,808 | INFO     | errors: (none)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 17:03:37] 2025-11-23 16:02:50,808 | INFO     | pilot state: finished 
[2025-11-23 17:03:37] 2025-11-23 16:02:50,808 | INFO     | transexitcode: 0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,808 | INFO     | exeerrorcode: 0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,808 | INFO     | exeerrordiag: 
[2025-11-23 17:03:37] 2025-11-23 16:02:50,809 | INFO     | exitcode: 0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,809 | INFO     | exitmsg: OK
[2025-11-23 17:03:37] 2025-11-23 16:02:50,809 | INFO     | cpuconsumptiontime: 87465 s
[2025-11-23 17:03:37] 2025-11-23 16:02:50,809 | INFO     | nevents: 1000
[2025-11-23 17:03:37] 2025-11-23 16:02:50,809 | INFO     | neventsw: 0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,809 | INFO     | pid: 3862869
[2025-11-23 17:03:37] 2025-11-23 16:02:50,809 | INFO     | pgrp: 3862869
[2025-11-23 17:03:37] 2025-11-23 16:02:50,810 | INFO     | corecount: 2
[2025-11-23 17:03:37] 2025-11-23 16:02:50,810 | INFO     | event service: False
[2025-11-23 17:03:37] 2025-11-23 16:02:50,810 | INFO     | sizes: {0: 2298795, 7: 2299057, 11: 2299085, 44153: 2345205, 44156: 2354261, 44164: 2354451}
[2025-11-23 17:03:37] 2025-11-23 16:02:50,810 | INFO     | --------------------------------------------------
[2025-11-23 17:03:37] 2025-11-23 16:02:50,810 | INFO     | 
[2025-11-23 17:03:37] 2025-11-23 16:02:50,810 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | job 6892522913 has completed (purged errors)
[2025-11-23 17:03:37] 2025-11-23 16:02:50,823 | INFO     | overall cleanup function is called
[2025-11-23 17:03:37] 2025-11-23 16:02:51,830 | INFO     | --- collectZombieJob: --- 10, [3862869]
[2025-11-23 17:03:37] 2025-11-23 16:02:51,830 | INFO     | zombie collector waiting for pid 3862869
[2025-11-23 17:03:37] 2025-11-23 16:02:51,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 17:03:37] 2025-11-23 16:02:51,831 | INFO     | collected zombie processes
[2025-11-23 17:03:37] 2025-11-23 16:02:51,831 | INFO     | will attempt to kill all subprocesses of pid=3862869
[2025-11-23 17:03:37] 2025-11-23 16:02:51,867 | INFO     | process IDs to be killed: [3862869] (in reverse order)
[2025-11-23 17:03:37] 2025-11-23 16:02:51,888 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 17:03:37] 2025-11-23 16:02:51,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 17:03:37] 2025-11-23 16:02:51,889 | INFO     | did not find any defunct processes belonging to 3862869
[2025-11-23 17:03:37] 2025-11-23 16:02:51,890 | INFO     | did not find any defunct processes belonging to 3862869
[2025-11-23 17:03:37] 2025-11-23 16:02:51,891 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 17:03:37] 2025-11-23 16:02:51,891 | INFO     | ready for new job
[2025-11-23 17:03:37] 2025-11-23 16:02:51,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 17:03:37] 2025-11-23 16:02:51,892 | INFO     | ***************************************
[2025-11-23 17:03:37] 2025-11-23 16:02:51,892 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 17:03:37] 2025-11-23 16:02:51,892 | INFO     | ***************************************
[2025-11-23 17:03:37] 2025-11-23 16:02:51,892 | INFO     | 
[2025-11-23 17:03:37] 2025-11-23 16:02:51,892 | INFO     | architecture information:
[2025-11-23 17:03:37] 2025-11-23 16:02:51,892 | INFO     | executing command: cat /etc/os-release
[2025-11-23 17:03:37] 2025-11-23 16:02:51,901 | INFO     | cat /etc/os-release:
[2025-11-23 17:03:37] NAME="CentOS Linux"
[2025-11-23 17:03:37] VERSION="7 (Core)"
[2025-11-23 17:03:37] ID="centos"
[2025-11-23 17:03:37] ID_LIKE="rhel fedora"
[2025-11-23 17:03:37] VERSION_ID="7"
[2025-11-23 17:03:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 17:03:37] ANSI_COLOR="0;31"
[2025-11-23 17:03:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 17:03:37] HOME_URL="https://www.centos.org/"
[2025-11-23 17:03:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 17:03:37] 
[2025-11-23 17:03:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 17:03:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 17:03:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 17:03:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 17:03:37] 
[2025-11-23 17:03:37] 2025-11-23 16:02:51,901 | INFO     | ***************************************
[2025-11-23 17:03:37] 2025-11-23 16:02:52,404 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | INFO     | sufficient remaining disk space (220835348480 B)
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | INFO     | update_server=False
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 17:03:37] 2025-11-23 16:02:52,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 17:03:37] 2025-11-23 16:02:52,428 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 17:03:37] 2025-11-23 16:02:52,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 17:03:37] 2025-11-23 16:02:52,510 | INFO     | all payload control threads have been joined
[2025-11-23 17:03:37] 2025-11-23 16:02:52,781 | INFO     | all data control threads have been joined
[2025-11-23 17:03:37] 2025-11-23 16:02:53,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:03:37] 2025-11-23 16:02:53,027 | INFO     | aborting loop
[2025-11-23 17:03:37] 2025-11-23 16:02:53,423 | INFO     | [job] retrieve thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:53,516 | INFO     | [payload] control thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:53,713 | INFO     | all job control threads have been joined
[2025-11-23 17:03:37] 2025-11-23 16:02:53,762 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:53,787 | INFO     | [data] control thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:53,925 | INFO     | [data] copytool_in thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,033 | INFO     | [job] job monitor thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,083 | INFO     | [job] validate thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,313 | INFO     | [payload] failed_post thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,349 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,434 | INFO     | [data] copytool_out thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,464 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,719 | INFO     | [job] control thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:54,851 | INFO     | [payload] validate_post thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:55,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 17:03:37] 2025-11-23 16:02:56,355 | INFO     | [job] queue monitor thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:02:56,455 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 17:03:37] 2025-11-23 16:03:30,770 | INFO     | [monitor] cgroup control has ended
[2025-11-23 17:03:37] 2025-11-23 16:03:32,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091428427584)>', '<ExcThread(monitor, started 140090785376000)>']
[2025-11-23 17:03:37] 2025-11-23 16:03:32,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 17:03:37] 2025-11-23 16:03:32,629 | INFO     | [monitor] control thread has ended
[2025-11-23 17:03:37] 2025-11-23 16:03:37,369 | INFO     | all workflow threads have been joined
[2025-11-23 17:03:37] 2025-11-23 16:03:37,370 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 17:03:37] 2025-11-23 16:03:37,370 | INFO     | traces error code: 0
[2025-11-23 17:03:37] 2025-11-23 16:03:37,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 17:03:37] 2025-11-23 16:03:37,413 [wrapper] ==== pilot stdout END ====
[2025-11-23 17:03:37] 2025-11-23 16:03:37,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 17:03:37] 2025-11-23 16:03:37,418 [wrapper] pilotpid: 3856450
[2025-11-23 17:03:37] 2025-11-23 16:03:37,420 [wrapper] Pilot exit status: 0
[2025-11-23 17:03:37] 2025-11-23 16:03:37,426 [wrapper] pandaids: 6892522913
[2025-11-23 17:03:37] 2025-11-23 16:03:37,441 [wrapper] cleanup supervisor_pilot 3937635 3856451
[2025-11-23 17:03:37] 2025-11-23 16:03:37,444 [wrapper] Test setup, not cleaning
[2025-11-23 17:03:37] 2025-11-23 16:03:37,446 [wrapper] apfmon messages muted
[2025-11-23 17:03:37] 2025-11-23 16:03:37,447 [wrapper] ==== wrapper stdout END ====
[2025-11-23 17:03:37] 2025-11-23 16:03:37,449 [wrapper] ==== wrapper stderr END ====
[2025-11-23 17:03:37]  *** Error codes and diagnostics ***
[2025-11-23 17:03:37]     "exeErrorCode": 0,
[2025-11-23 17:03:37]     "exeErrorDiag": "",
[2025-11-23 17:03:37]     "pilotErrorCode": 0,
[2025-11-23 17:03:37]     "pilotErrorDiag": "",
[2025-11-23 17:03:37]  *** Listing of results directory ***
[2025-11-23 17:03:37] total 1327180
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-23 17:03:37] -rwx------ 1 boinc boinc     36292 Nov 19 08:06 runpilot2-wrapper.sh
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc      5112 Nov 19 08:07 queuedata.json
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc       100 Nov 23 04:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 17:03:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 04:46 run_atlas
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc       105 Nov 23 04:46 job.xml
[2025-11-23 17:03:37] -rw-r--r-- 2 boinc boinc 410231353 Nov 23 04:46 EVNT.47493027._000058.pool.root.1
[2025-11-23 17:03:37] -rw-r--r-- 2 boinc boinc    590101 Nov 23 04:46 input.tar.gz
[2025-11-23 17:03:37] -rw-r--r-- 2 boinc boinc     15120 Nov 23 04:46 start_atlas.sh
[2025-11-23 17:03:37] drwxrwx--x 2 boinc boinc      4096 Nov 23 04:46 shared
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc         0 Nov 23 04:46 boinc_setup_complete
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc      6280 Nov 23 04:46 init_data.xml
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc         0 Nov 23 04:46 boinc_lockfile
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc      2771 Nov 23 04:46 pandaJob.out
[2025-11-23 17:03:37] -rw------- 1 boinc boinc    989784 Nov 23 04:46 agis_schedconf.cvmfs.json
[2025-11-23 17:03:37] drwx------ 5 boinc boinc      4096 Nov 23 04:46 pilot3
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc       531 Nov 23 16:58 boinc_task_state.xml
[2025-11-23 17:03:37] -rw------- 1 boinc boinc 930049944 Nov 23 17:02 HITS.47493029._000538.pool.root.1
[2025-11-23 17:03:37] -rw------- 1 boinc boinc      1038 Nov 23 17:02 memory_monitor_summary.json
[2025-11-23 17:03:37] -rw------- 1 boinc boinc   1526164 Nov 23 17:02 agis_ddmendpoints.agis.ALL.json
[2025-11-23 17:03:37] -rw------- 1 boinc boinc   1213349 Nov 23 17:02 log.47493029._000538.job.log.tgz.1
[2025-11-23 17:03:37] -rw------- 1 boinc boinc        95 Nov 23 17:02 pilot_heartbeat.json
[2025-11-23 17:03:37] -rw------- 1 boinc boinc      8557 Nov 23 17:02 heartbeat.json
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc        28 Nov 23 17:03 wrapper_checkpoint.txt
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc      8192 Nov 23 17:03 boinc_mmap_file
[2025-11-23 17:03:37] -rw------- 1 boinc boinc      4556 Nov 23 17:03 pilotlog.txt
[2025-11-23 17:03:37] -rw------- 1 boinc boinc   6199458 Nov 23 17:03 log.47493029._000538.job.log.1
[2025-11-23 17:03:37] -rw------- 1 boinc boinc       353 Nov 23 17:03 output.list
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc       620 Nov 23 17:03 runtime_log
[2025-11-23 17:03:37] -rw------- 1 boinc boinc   7434240 Nov 23 17:03 result.tar.gz
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc      8778 Nov 23 17:03 runtime_log.err
[2025-11-23 17:03:37] -rw------- 1 boinc boinc       665 Nov 23 17:03 V9wKDm6Rrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTrFKDm0VC8mn.diag
[2025-11-23 17:03:37] -rw-r--r-- 1 boinc boinc     21495 Nov 23 17:03 stderr.txt
[2025-11-23 17:03:37] HITS file was successfully produced:
[2025-11-23 17:03:37] -rw------- 1 boinc boinc 930049944 Nov 23 17:02 shared/HITS.pool.root.1
[2025-11-23 17:03:37]  *** Contents of shared directory: ***
[2025-11-23 17:03:37] total 1316736
[2025-11-23 17:03:37] -rw-r--r-- 2 boinc boinc 410231353 Nov 23 04:46 ATLAS.root_0
[2025-11-23 17:03:37] -rw-r--r-- 2 boinc boinc    590101 Nov 23 04:46 input.tar.gz
[2025-11-23 17:03:37] -rw-r--r-- 2 boinc boinc     15120 Nov 23 04:46 start_atlas.sh
[2025-11-23 17:03:37] -rw------- 1 boinc boinc 930049944 Nov 23 17:02 HITS.pool.root.1
[2025-11-23 17:03:37] -rw------- 1 boinc boinc   7434240 Nov 23 17:03 result.tar.gz
17:03:38 (3852743): run_atlas exited; CPU time 87598.264537
17:03:38 (3852743): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN