Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:42:06 (2005658): wrapper (7.7.26015): starting
22:42:06 (2005658): wrapper: running run_atlas (--nthreads 2)
[2025-11-20 22:42:06] Arguments: --nthreads 2
[2025-11-20 22:42:06] Threads: 2
[2025-11-20 22:42:06] Checking for CVMFS
[2025-11-20 22:42:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:42:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:42:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:42:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:42:06] 2.9.2.0 1624889 2980 53908 153088 0 81 19297775 36864000 0 130560 0 956795 99.770 276927 5159 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 22:42:06] CVMFS is ok
[2025-11-20 22:42:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:42:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:42:06] Further information can be found at the LHC@home message board.
[2025-11-20 22:42:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:42:06] Checking for apptainer binary...
[2025-11-20 22:42:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:42:06] Running /usr/bin/apptainer --version
[2025-11-20 22:42:06] apptainer version 1.4.1-1.1
[2025-11-20 22:42:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:42:07] thA315
[2025-11-20 22:42:07] apptainer works
[2025-11-20 22:42:07] Set ATHENA_PROC_NUMBER=2
[2025-11-20 22:42:07] Set ATHENA_CORE_NUMBER=2
[2025-11-20 22:42:07] Starting ATLAS job with PandaID=6891575198
[2025-11-20 22:42:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 11:10:29]  *** The last 200 lines of the pilot log: ***
[2025-11-21 11:10:29] 2025-11-21 10:09:56,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:10:29] 2025-11-21 10:09:56,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 11:10:29] 2025-11-21 10:09:56,987 | INFO     | aborting loop
[2025-11-21 11:10:29] 2025-11-21 10:09:57,194 | INFO     | all data control threads have been joined
[2025-11-21 11:10:29] 2025-11-21 10:09:57,792 | INFO     | all payload control threads have been joined
[2025-11-21 11:10:29] 2025-11-21 10:09:57,884 | INFO     | all job control threads have been joined
[2025-11-21 11:10:29] 2025-11-21 10:09:57,992 | INFO     | [job] retrieve thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:57,993 | INFO     | [job] queue monitor thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:57,993 | INFO     | [job] job monitor thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,166 | INFO     | [payload] failed_post thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,185 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 11:10:29] 2025-11-21 10:09:58,200 | INFO     | [data] control thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,671 | INFO     | [payload] validate_post thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,799 | INFO     | [payload] control thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,890 | INFO     | [job] control thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,922 | INFO     | [job] validate thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:58,946 | INFO     | [data] copytool_in thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:59,009 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:59,036 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:09:59,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:10:00,192 | INFO     | [data] copytool_out thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:10:00,994 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 11:10:29] 2025-11-21 10:10:24,152 | INFO     | [monitor] cgroup control has ended
[2025-11-21 11:10:29] 2025-11-21 10:10:24,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687427671872)>', '<ExcThread(monitor, started 139686941017856)>']
[2025-11-21 11:10:29] 2025-11-21 10:10:25,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 11:10:29] 2025-11-21 10:10:25,126 | INFO     | [monitor] control thread has ended
[2025-11-21 11:10:29] 2025-11-21 10:10:29,234 | INFO     | all workflow threads have been joined
[2025-11-21 11:10:29] 2025-11-21 10:10:29,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 11:10:29] 2025-11-21 10:10:29,236 | INFO     | traces error code: 0
[2025-11-21 11:10:29] 2025-11-21 10:10:29,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 11:10:29] 2025-11-21 10:10:29,282 [wrapper] ==== pilot stdout END ====
[2025-11-21 11:10:29] 2025-11-21 10:10:29,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 11:10:29] 2025-11-21 10:10:29,287 [wrapper] pilotpid: 2009369
[2025-11-21 11:10:29] 2025-11-21 10:10:29,289 [wrapper] Pilot exit status: 0
[2025-11-21 11:10:29] 2025-11-21 10:10:29,294 [wrapper] pandaids: 6891575198
[2025-11-21 11:10:29] 2025-11-21 10:10:29,308 [wrapper] cleanup supervisor_pilot 2099710 2009370
[2025-11-21 11:10:29] 2025-11-21 10:10:29,310 [wrapper] Test setup, not cleaning
[2025-11-21 11:10:29] 2025-11-21 10:10:29,312 [wrapper] apfmon messages muted
[2025-11-21 11:10:29] 2025-11-21 10:10:29,314 [wrapper] ==== wrapper stdout END ====
[2025-11-21 11:10:29] 2025-11-21 10:10:29,316 [wrapper] ==== wrapper stderr END ====
[2025-11-21 11:10:29]  *** Error codes and diagnostics ***
[2025-11-21 11:10:29]     "exeErrorCode": 0,
[2025-11-21 11:10:29]     "exeErrorDiag": "",
[2025-11-21 11:10:29]     "pilotErrorCode": 0,
[2025-11-21 11:10:29]     "pilotErrorDiag": "",
[2025-11-21 11:10:29]  *** Listing of results directory ***
[2025-11-21 11:10:29] total 1311192
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:24 pilot3.tar.gz
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc      5112 Nov 18 17:32 queuedata.json
[2025-11-21 11:10:29] -rwx------ 1 boinc boinc     36292 Nov 18 17:34 runpilot2-wrapper.sh
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc       100 Nov 20 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 11:10:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 22:42 run_atlas
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc       105 Nov 20 22:42 job.xml
[2025-11-21 11:10:29] -rw-r--r-- 2 boinc boinc 406815744 Nov 20 22:42 EVNT.47493065._000359.pool.root.1
[2025-11-21 11:10:29] -rw-r--r-- 2 boinc boinc    590093 Nov 20 22:42 input.tar.gz
[2025-11-21 11:10:29] -rw-r--r-- 2 boinc boinc     15120 Nov 20 22:42 start_atlas.sh
[2025-11-21 11:10:29] drwxrwx--x 2 boinc boinc      4096 Nov 20 22:42 shared
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc         0 Nov 20 22:42 boinc_setup_complete
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc      6205 Nov 20 22:42 init_data.xml
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc         0 Nov 20 22:42 boinc_lockfile
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc      2773 Nov 20 22:42 pandaJob.out
[2025-11-21 11:10:29] -rw------- 1 boinc boinc    989440 Nov 20 22:42 agis_schedconf.cvmfs.json
[2025-11-21 11:10:29] drwx------ 5 boinc boinc      4096 Nov 20 22:42 pilot3
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc       532 Nov 21 11:05 boinc_task_state.xml
[2025-11-21 11:10:29] -rw------- 1 boinc boinc        95 Nov 21 11:09 pilot_heartbeat.json
[2025-11-21 11:10:29] -rw------- 1 boinc boinc 916904799 Nov 21 11:09 HITS.47493068._003582.pool.root.1
[2025-11-21 11:10:29] -rw------- 1 boinc boinc      1022 Nov 21 11:09 memory_monitor_summary.json
[2025-11-21 11:10:29] -rw------- 1 boinc boinc   1526164 Nov 21 11:09 agis_ddmendpoints.agis.ALL.json
[2025-11-21 11:10:29] -rw------- 1 boinc boinc   1228897 Nov 21 11:09 log.47493068._003582.job.log.tgz.1
[2025-11-21 11:10:29] -rw------- 1 boinc boinc      8571 Nov 21 11:09 heartbeat.json
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc      8192 Nov 21 11:10 boinc_mmap_file
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc        28 Nov 21 11:10 wrapper_checkpoint.txt
[2025-11-21 11:10:29] -rw------- 1 boinc boinc      4556 Nov 21 11:10 pilotlog.txt
[2025-11-21 11:10:29] -rw------- 1 boinc boinc   6287168 Nov 21 11:10 log.47493068._003582.job.log.1
[2025-11-21 11:10:29] -rw------- 1 boinc boinc       353 Nov 21 11:10 output.list
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc       620 Nov 21 11:10 runtime_log
[2025-11-21 11:10:29] -rw------- 1 boinc boinc   7536640 Nov 21 11:10 result.tar.gz
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc      8778 Nov 21 11:10 runtime_log.err
[2025-11-21 11:10:29] -rw------- 1 boinc boinc       665 Nov 21 11:10 TfANDmfpdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtpFKDm8OrGsn.diag
[2025-11-21 11:10:29] -rw-r--r-- 1 boinc boinc      6512 Nov 21 11:10 stderr.txt
[2025-11-21 11:10:29] HITS file was successfully produced:
[2025-11-21 11:10:30] -rw------- 1 boinc boinc 916904799 Nov 21 11:09 shared/HITS.pool.root.1
[2025-11-21 11:10:30]  *** Contents of shared directory: ***
[2025-11-21 11:10:30] total 1300664
[2025-11-21 11:10:30] -rw-r--r-- 2 boinc boinc 406815744 Nov 20 22:42 ATLAS.root_0
[2025-11-21 11:10:30] -rw-r--r-- 2 boinc boinc    590093 Nov 20 22:42 input.tar.gz
[2025-11-21 11:10:30] -rw-r--r-- 2 boinc boinc     15120 Nov 20 22:42 start_atlas.sh
[2025-11-21 11:10:30] -rw------- 1 boinc boinc 916904799 Nov 21 11:09 HITS.pool.root.1
[2025-11-21 11:10:30] -rw------- 1 boinc boinc   7536640 Nov 21 11:10 result.tar.gz
11:10:31 (2005658): run_atlas exited; CPU time 88907.202595
11:10:31 (2005658): called boinc_finish(0)

</stderr_txt>
]]>

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