Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
14:19:34 (3619812): wrapper (7.7.26015): starting
14:19:34 (3619812): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 14:19:34] Arguments: --nthreads 12
[2025-11-20 14:19:34] Threads: 12
[2025-11-20 14:19:34] Checking for CVMFS
[2025-11-20 14:19:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 14:19:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 14:19:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 14:19:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 14:19:35] 2.13.0.0 2291514 2442 146136 153084 0 89 2789336 4096001 11609 130560 0 16361027 99.966 509744 529 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-20 14:19:35] CVMFS is ok
[2025-11-20 14:19:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 14:19:35] Checking for apptainer binary...
[2025-11-20 14:19:35] apptainer is not installed, using version from CVMFS
[2025-11-20 14:19:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 14:19:36] epyc7v12
[2025-11-20 14:19:36] apptainer works
[2025-11-20 14:19:36] Set ATHENA_PROC_NUMBER=12
[2025-11-20 14:19:36] Set ATHENA_CORE_NUMBER=12
[2025-11-20 14:19:36] Starting ATLAS job with PandaID=6891598140
[2025-11-20 14:19:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:16:49]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:16:49] 2025-11-20 23:16:05,968 | INFO     | monitor loop #1903: job 0:6891598140 is in state 'finished'
[2025-11-20 23:16:49] 2025-11-20 23:16:05,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:16:49] 2025-11-20 23:16:06,827 | INFO     | time since job start (32177s) is within the limit (172800.0s)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,446 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 23:16:49] 2025-11-20 23:16:07,492 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2269.7655859375
[2025-11-20 23:16:49] 2025-11-20 23:16:07,567 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/4/PanDA_Pilot-6891598140/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,568 | INFO     | extracted standard info from prmon json
[2025-11-20 23:16:49] 2025-11-20 23:16:07,568 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:16:49] 2025-11-20 23:16:07,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:16:49] 2025-11-20 23:16:07,578 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:16:49] 2025-11-20 23:16:07,579 | INFO     | sum of square deviations: 45384964791.64333
[2025-11-20 23:16:49] 2025-11-20 23:16:07,586 | INFO     | sum of deviations: 617272514770.8093
[2025-11-20 23:16:49] 2025-11-20 23:16:07,586 | INFO     | mean x: 1763664464.4857686
[2025-11-20 23:16:49] 2025-11-20 23:16:07,586 | INFO     | mean y: 3414741.641366224
[2025-11-20 23:16:49] 2025-11-20 23:16:07,586 | INFO     | intersect: -23983859550.692043
[2025-11-20 23:16:49] 2025-11-20 23:16:07,587 | INFO     | chi2: 7.494278632432522
[2025-11-20 23:16:49] 2025-11-20 23:16:07,587 | INFO     | sum of square deviations: 44105635418.0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,594 | INFO     | sum of deviations: 827964908540.9987
[2025-11-20 23:16:49] 2025-11-20 23:16:07,595 | INFO     | mean x: 1763664312.0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,595 | INFO     | mean y: 3439844.0478927204
[2025-11-20 23:16:49] 2025-11-20 23:16:07,595 | INFO     | intersect: -33104623262.694202
[2025-11-20 23:16:49] 2025-11-20 23:16:07,595 | INFO     | chi2: 4.2169688467589435
[2025-11-20 23:16:49] 2025-11-20 23:16:07,596 | INFO     | current chi2=4.2169688467589435 (change=43.73082382459826 %)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,596 | INFO     | sum of square deviations: 42850522255.19123
[2025-11-20 23:16:49] 2025-11-20 23:16:07,603 | INFO     | sum of deviations: 930908882510.3201
[2025-11-20 23:16:49] 2025-11-20 23:16:07,603 | INFO     | mean x: 1763664159.5106382
[2025-11-20 23:16:49] 2025-11-20 23:16:07,603 | INFO     | mean y: 3452332.760154739
[2025-11-20 23:16:49] 2025-11-20 23:16:07,603 | INFO     | intersect: -38311381313.279015
[2025-11-20 23:16:49] 2025-11-20 23:16:07,604 | INFO     | chi2: 3.252468808947776
[2025-11-20 23:16:49] 2025-11-20 23:16:07,604 | INFO     | current chi2=3.252468808947776 (change=22.87187960974524 %)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,604 | INFO     | right removable region: 516
[2025-11-20 23:16:49] 2025-11-20 23:16:07,605 | INFO     | sum of square deviations: 44105157788.0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,612 | INFO     | sum of deviations: 410164622230.00024
[2025-11-20 23:16:49] 2025-11-20 23:16:07,612 | INFO     | mean x: 1763664617.0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,612 | INFO     | mean y: 3439399.090038314
[2025-11-20 23:16:49] 2025-11-20 23:16:07,613 | INFO     | intersect: -16398107894.978176
[2025-11-20 23:16:49] 2025-11-20 23:16:07,613 | INFO     | chi2: 4.674649456654217
[2025-11-20 23:16:49] 2025-11-20 23:16:07,613 | INFO     | current chi2=4.674649456654217 (change=37.62375692272732 %)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,614 | INFO     | sum of square deviations: 42849980333.22627
[2025-11-20 23:16:49] 2025-11-20 23:16:07,621 | INFO     | sum of deviations: 349717264582.98413
[2025-11-20 23:16:49] 2025-11-20 23:16:07,621 | INFO     | mean x: 1763664769.49323
[2025-11-20 23:16:49] 2025-11-20 23:16:07,621 | INFO     | mean y: 3446739.7098646034
[2025-11-20 23:16:49] 2025-11-20 23:16:07,621 | INFO     | intersect: -14390585977.040104
[2025-11-20 23:16:49] 2025-11-20 23:16:07,622 | INFO     | chi2: 4.521892260080909
[2025-11-20 23:16:49] 2025-11-20 23:16:07,622 | INFO     | current chi2=4.521892260080909 (change=3.267778642864077 %)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,622 | INFO     | left removable region: 20
[2025-11-20 23:16:49] 2025-11-20 23:16:07,623 | INFO     | sum of square deviations: 37838192979.927414
[2025-11-20 23:16:49] 2025-11-20 23:16:07,629 | INFO     | sum of deviations: 584873375594.4271
[2025-11-20 23:16:49] 2025-11-20 23:16:07,629 | INFO     | mean x: 1763664739.012097
[2025-11-20 23:16:49] 2025-11-20 23:16:07,629 | INFO     | mean y: 3497200.7620967743
[2025-11-20 23:16:49] 2025-11-20 23:16:07,629 | INFO     | intersect: -27257861444.722782
[2025-11-20 23:16:49] 2025-11-20 23:16:07,630 | INFO     | chi2: 0.12679313020968222
[2025-11-20 23:16:49] 2025-11-20 23:16:07,630 | INFO     | current memory leak: 15.46 B/s (using 496 data points, chi2=0.13)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,631 | INFO     | could have reported an average CPU frequency of 2354 MHz (20 samples)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,631 | INFO     | ..............................
[2025-11-20 23:16:49] 2025-11-20 23:16:07,631 | INFO     | . Timing measurements:
[2025-11-20 23:16:49] 2025-11-20 23:16:07,631 | INFO     | . get job = 0 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,632 | INFO     | . initial setup = 1 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,632 | INFO     | . payload setup = 7 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,632 | INFO     | . stage-in = 0 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,632 | INFO     | . payload execution = 32138 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,632 | INFO     | . stage-out = 3 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,632 | INFO     | . log creation = 0 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,632 | INFO     | ..............................
[2025-11-20 23:16:49] 2025-11-20 23:16:07,959 | INFO     | 
[2025-11-20 23:16:49] 2025-11-20 23:16:07,959 | INFO     | job summary report
[2025-11-20 23:16:49] 2025-11-20 23:16:07,959 | INFO     | --------------------------------------------------
[2025-11-20 23:16:49] 2025-11-20 23:16:07,959 | INFO     | PanDA job id: 6891598140
[2025-11-20 23:16:49] 2025-11-20 23:16:07,959 | INFO     | task id: 47493068
[2025-11-20 23:16:49] 2025-11-20 23:16:07,959 | INFO     | errors: (none)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:16:49] 2025-11-20 23:16:07,960 | INFO     | pilot state: finished 
[2025-11-20 23:16:49] 2025-11-20 23:16:07,960 | INFO     | transexitcode: 0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,960 | INFO     | exeerrorcode: 0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,960 | INFO     | exeerrordiag: 
[2025-11-20 23:16:49] 2025-11-20 23:16:07,960 | INFO     | exitcode: 0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | exitmsg: OK
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | cpuconsumptiontime: 255391 s
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | nevents: 1000
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | neventsw: 0
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | pid: 3642893
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | pgrp: 3642893
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | corecount: 12
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | event service: False
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | sizes: {0: 2298819, 6: 2299081, 11: 2299109, 32149: 2338398, 32154: 2347438, 32155: 2347494, 32161: 2347868}
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | --------------------------------------------------
[2025-11-20 23:16:49] 2025-11-20 23:16:07,961 | INFO     | 
[2025-11-20 23:16:49] 2025-11-20 23:16:07,962 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/4
[2025-11-20 23:16:49] 2025-11-20 23:16:07,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:16:49] 2025-11-20 23:16:07,993 | INFO     | job 6891598140 has completed (purged errors)
[2025-11-20 23:16:49] 2025-11-20 23:16:07,993 | INFO     | overall cleanup function is called
[2025-11-20 23:16:49] 2025-11-20 23:16:09,015 | INFO     | --- collectZombieJob: --- 10, [3642893]
[2025-11-20 23:16:49] 2025-11-20 23:16:09,015 | INFO     | zombie collector waiting for pid 3642893
[2025-11-20 23:16:49] 2025-11-20 23:16:09,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:16:49] 2025-11-20 23:16:09,015 | INFO     | collected zombie processes
[2025-11-20 23:16:49] 2025-11-20 23:16:09,015 | INFO     | will attempt to kill all subprocesses of pid=3642893
[2025-11-20 23:16:49] 2025-11-20 23:16:09,564 | INFO     | process IDs to be killed: [3642893] (in reverse order)
[2025-11-20 23:16:49] 2025-11-20 23:16:09,791 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:16:49] 2025-11-20 23:16:09,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:16:49] 2025-11-20 23:16:09,807 | INFO     | did not find any defunct processes belonging to 3642893
[2025-11-20 23:16:49] 2025-11-20 23:16:09,823 | INFO     | did not find any defunct processes belonging to 3642893
[2025-11-20 23:16:49] 2025-11-20 23:16:09,825 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:16:49] 2025-11-20 23:16:09,825 | INFO     | ready for new job
[2025-11-20 23:16:49] 2025-11-20 23:16:09,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:16:49] 2025-11-20 23:16:09,829 | INFO     | ***************************************
[2025-11-20 23:16:49] 2025-11-20 23:16:09,829 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:16:49] 2025-11-20 23:16:09,829 | INFO     | ***************************************
[2025-11-20 23:16:49] 2025-11-20 23:16:09,829 | INFO     | 
[2025-11-20 23:16:49] 2025-11-20 23:16:09,856 | INFO     | architecture information:
[2025-11-20 23:16:49] 2025-11-20 23:16:09,857 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:16:49] 2025-11-20 23:16:09,876 | INFO     | cat /etc/os-release:
[2025-11-20 23:16:49] NAME="CentOS Linux"
[2025-11-20 23:16:49] VERSION="7 (Core)"
[2025-11-20 23:16:49] ID="centos"
[2025-11-20 23:16:49] ID_LIKE="rhel fedora"
[2025-11-20 23:16:49] VERSION_ID="7"
[2025-11-20 23:16:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:16:49] ANSI_COLOR="0;31"
[2025-11-20 23:16:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:16:49] HOME_URL="https://www.centos.org/"
[2025-11-20 23:16:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:16:49] 
[2025-11-20 23:16:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:16:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:16:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:16:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:16:49] 
[2025-11-20 23:16:49] 2025-11-20 23:16:09,877 | INFO     | ***************************************
[2025-11-20 23:16:49] 2025-11-20 23:16:10,379 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/4
[2025-11-20 23:16:49] 2025-11-20 23:16:10,401 | INFO     | sufficient remaining disk space (338815877120 B)
[2025-11-20 23:16:49] 2025-11-20 23:16:10,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:16:49] 2025-11-20 23:16:10,402 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:16:49] 2025-11-20 23:16:10,402 | INFO     | update_server=False
[2025-11-20 23:16:49] 2025-11-20 23:16:10,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:16:49] 2025-11-20 23:16:10,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:16:49] 2025-11-20 23:16:10,407 | INFO     | aborting loop
[2025-11-20 23:16:49] 2025-11-20 23:16:10,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:16:49] 2025-11-20 23:16:11,077 | INFO     | all payload control threads have been joined
[2025-11-20 23:16:49] 2025-11-20 23:16:11,079 | INFO     | all job control threads have been joined
[2025-11-20 23:16:49] 2025-11-20 23:16:11,407 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:11,412 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:11,439 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:11,447 | INFO     | all data control threads have been joined
[2025-11-20 23:16:49] 2025-11-20 23:16:11,819 | INFO     | [job] validate thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:11,879 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:11,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:16:49] 2025-11-20 23:16:11,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,055 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,079 | INFO     | [payload] control thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,083 | INFO     | [job] control thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,165 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,451 | INFO     | [data] control thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,616 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:16:49] 2025-11-20 23:16:12,811 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:12,955 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:13,744 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:15,895 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:16:49] 2025-11-20 23:16:40,539 | INFO     | PID=3627927 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-20 23:16:49] 2025-11-20 23:16:40,539 | INFO     | .. there are 16 such processes running
[2025-11-20 23:16:49] 2025-11-20 23:16:40,540 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:16:49] 2025-11-20 23:16:40,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:16:49] 2025-11-20 23:16:40,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:16:49] 2025-11-20 23:16:43,526 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:16:49] 2025-11-20 23:16:44,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662619248448)>', '<ExcThread(monitor, started 140662041204480)>']
[2025-11-20 23:16:49] 2025-11-20 23:16:44,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:16:49] 2025-11-20 23:16:44,555 | INFO     | [monitor] control thread has ended
[2025-11-20 23:16:49] 2025-11-20 23:16:49,555 | INFO     | all workflow threads have been joined
[2025-11-20 23:16:49] 2025-11-20 23:16:49,555 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:16:49] 2025-11-20 23:16:49,555 | INFO     | traces error code: 0
[2025-11-20 23:16:49] 2025-11-20 23:16:49,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:16:49] 2025-11-20 23:16:49,691 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:16:49] 2025-11-20 23:16:49,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:16:49] 2025-11-20 23:16:49,698 [wrapper] pilotpid: 3627927
[2025-11-20 23:16:49] 2025-11-20 23:16:49,701 [wrapper] Pilot exit status: 0
[2025-11-20 23:16:49] 2025-11-20 23:16:49,717 [wrapper] pandaids: 6891598140
[2025-11-20 23:16:49] 2025-11-20 23:16:49,835 [wrapper] cleanup supervisor_pilot  258560 3627928
[2025-11-20 23:16:49] 2025-11-20 23:16:49,840 [wrapper] Test setup, not cleaning
[2025-11-20 23:16:49] 2025-11-20 23:16:49,844 [wrapper] apfmon messages muted
[2025-11-20 23:16:49] 2025-11-20 23:16:49,848 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:16:49] 2025-11-20 23:16:49,852 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:16:49]  *** Error codes and diagnostics ***
[2025-11-20 23:16:49]     "exeErrorCode": 0,
[2025-11-20 23:16:49]     "exeErrorDiag": "",
[2025-11-20 23:16:49]     "pilotErrorCode": 0,
[2025-11-20 23:16:49]     "pilotErrorDiag": "",
[2025-11-20 23:16:49]  *** Listing of results directory ***
[2025-11-20 23:16:49] total 1309164
[2025-11-20 23:16:49] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:50 pilot3.tar.gz
[2025-11-20 23:16:49] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:55 queuedata.json
[2025-11-20 23:16:49] -rwx------ 1 boinc boinc     36292 Nov 18 18:57 runpilot2-wrapper.sh
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc       100 Nov 20 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:16:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 14:19 run_atlas
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc       105 Nov 20 14:19 job.xml
[2025-11-20 23:16:49] -rw-r--r-- 2 boinc boinc 411556009 Nov 20 14:19 EVNT.47493065._000803.pool.root.1
[2025-11-20 23:16:49] -rw-r--r-- 2 boinc boinc     15120 Nov 20 14:19 start_atlas.sh
[2025-11-20 23:16:49] drwxrwx--x 2 boinc boinc      4096 Nov 20 14:19 shared
[2025-11-20 23:16:49] -rw-r--r-- 2 boinc boinc    590095 Nov 20 14:19 input.tar.gz
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc      7039 Nov 20 14:19 init_data.xml
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc         0 Nov 20 14:19 boinc_setup_complete
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc         0 Nov 20 14:19 boinc_lockfile
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc      2773 Nov 20 14:19 pandaJob.out
[2025-11-20 23:16:49] -rw------- 1 boinc boinc    989440 Nov 20 14:19 agis_schedconf.cvmfs.json
[2025-11-20 23:16:49] drwx------ 5 boinc boinc      4096 Nov 20 14:19 pilot3
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc       533 Nov 20 23:02 boinc_task_state.xml
[2025-11-20 23:16:49] -rw------- 1 boinc boinc 912201877 Nov 20 23:15 HITS.47493068._006680.pool.root.1
[2025-11-20 23:16:49] -rw------- 1 boinc boinc      1046 Nov 20 23:15 memory_monitor_summary.json
[2025-11-20 23:16:49] -rw------- 1 boinc boinc   1526164 Nov 20 23:15 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:16:49] -rw------- 1 boinc boinc   2229251 Nov 20 23:16 log.47493068._006680.job.log.tgz.1
[2025-11-20 23:16:49] -rw------- 1 boinc boinc      8559 Nov 20 23:16 heartbeat.json
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc        29 Nov 20 23:16 wrapper_checkpoint.txt
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc      8192 Nov 20 23:16 boinc_mmap_file
[2025-11-20 23:16:49] -rw------- 1 boinc boinc        95 Nov 20 23:16 pilot_heartbeat.json
[2025-11-20 23:16:49] -rw------- 1 boinc boinc      4849 Nov 20 23:16 pilotlog.txt
[2025-11-20 23:16:49] -rw------- 1 boinc boinc   4220914 Nov 20 23:16 log.47493068._006680.job.log.1
[2025-11-20 23:16:49] -rw------- 1 boinc boinc       353 Nov 20 23:16 output.list
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc       620 Nov 20 23:16 runtime_log
[2025-11-20 23:16:49] -rw------- 1 boinc boinc   6471680 Nov 20 23:16 result.tar.gz
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc      9008 Nov 20 23:16 runtime_log.err
[2025-11-20 23:16:49] -rw------- 1 boinc boinc       660 Nov 20 23:16 YiQLDmO4ff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3MGKDm0DZoim.diag
[2025-11-20 23:16:49] -rw-rw-r-- 1 boinc boinc     21099 Nov 20 23:16 stderr.txt
[2025-11-20 23:16:50] HITS file was successfully produced:
[2025-11-20 23:16:50] -rw------- 1 boinc boinc 912201877 Nov 20 23:15 shared/HITS.pool.root.1
[2025-11-20 23:16:50]  *** Contents of shared directory: ***
[2025-11-20 23:16:50] total 1299660
[2025-11-20 23:16:50] -rw-r--r-- 2 boinc boinc 411556009 Nov 20 14:19 ATLAS.root_0
[2025-11-20 23:16:50] -rw-r--r-- 2 boinc boinc     15120 Nov 20 14:19 start_atlas.sh
[2025-11-20 23:16:50] -rw-r--r-- 2 boinc boinc    590095 Nov 20 14:19 input.tar.gz
[2025-11-20 23:16:50] -rw------- 1 boinc boinc 912201877 Nov 20 23:15 HITS.pool.root.1
[2025-11-20 23:16:50] -rw------- 1 boinc boinc   6471680 Nov 20 23:16 result.tar.gz
23:16:51 (3619812): run_atlas exited; CPU time 256536.531628
23:16:51 (3619812): called boinc_finish(0)

</stderr_txt>
]]>

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