Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
14:19:33 (3619550): wrapper (7.7.26015): starting
14:19:33 (3619550): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 14:19:33] Arguments: --nthreads 12
[2025-11-20 14:19:33] Threads: 12
[2025-11-20 14:19:33] Checking for CVMFS
[2025-11-20 14:19:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 14:19:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 14:19:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 14:19:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 14:19:34] 2.13.0.0 2291514 2442 146220 153084 0 89 2789336 4096001 11608 130560 0 16357238 99.966 509744 529 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-20 14:19:34] CVMFS is ok
[2025-11-20 14:19:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 14:19:34] Checking for apptainer binary...
[2025-11-20 14:19:34] apptainer is not installed, using version from CVMFS
[2025-11-20 14:19:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 14:19:35] epyc7v12
[2025-11-20 14:19:35] apptainer works
[2025-11-20 14:19:35] Set ATHENA_PROC_NUMBER=12
[2025-11-20 14:19:35] Set ATHENA_CORE_NUMBER=12
[2025-11-20 14:19:35] Starting ATLAS job with PandaID=6891582715
[2025-11-20 14:19:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:17:02]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:17:02] 2025-11-20 23:16:28,963 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 23:17:02] 2025-11-20 23:16:29,005 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2301.9177499999996
[2025-11-20 23:17:02] 2025-11-20 23:16:29,072 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/3/PanDA_Pilot-6891582715/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,072 | INFO     | extracted standard info from prmon json
[2025-11-20 23:17:02] 2025-11-20 23:16:29,072 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:17:02] 2025-11-20 23:16:29,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:17:02] 2025-11-20 23:16:29,082 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:17:02] 2025-11-20 23:16:29,083 | INFO     | sum of square deviations: 45645085086.96954
[2025-11-20 23:17:02] 2025-11-20 23:16:29,090 | INFO     | sum of deviations: 647057615364.5759
[2025-11-20 23:17:02] 2025-11-20 23:16:29,090 | INFO     | mean x: 1763664494.0757575
[2025-11-20 23:17:02] 2025-11-20 23:16:29,090 | INFO     | mean y: 3418557.5606060605
[2025-11-20 23:17:02] 2025-11-20 23:16:29,090 | INFO     | intersect: -24998014557.647038
[2025-11-20 23:17:02] 2025-11-20 23:16:29,091 | INFO     | chi2: 6.814382813433074
[2025-11-20 23:17:02] 2025-11-20 23:16:29,091 | INFO     | sum of square deviations: 44360886844.43614
[2025-11-20 23:17:02] 2025-11-20 23:16:29,098 | INFO     | sum of deviations: 861752133874.3754
[2025-11-20 23:17:02] 2025-11-20 23:16:29,099 | INFO     | mean x: 1763664341.5908222
[2025-11-20 23:17:02] 2025-11-20 23:16:29,099 | INFO     | mean y: 3444031.244741874
[2025-11-20 23:17:02] 2025-11-20 23:16:29,099 | INFO     | intersect: -34257401905.712868
[2025-11-20 23:17:02] 2025-11-20 23:16:29,099 | INFO     | chi2: 3.4514867369152373
[2025-11-20 23:17:02] 2025-11-20 23:16:29,100 | INFO     | current chi2=3.4514867369152373 (change=49.349972970239044 %)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,100 | INFO     | sum of square deviations: 43100919302.77974
[2025-11-20 23:17:02] 2025-11-20 23:16:29,108 | INFO     | sum of deviations: 928442746388.5339
[2025-11-20 23:17:02] 2025-11-20 23:16:29,108 | INFO     | mean x: 1763664189.1003861
[2025-11-20 23:17:02] 2025-11-20 23:16:29,108 | INFO     | mean y: 3452078.335907336
[2025-11-20 23:17:02] 2025-11-20 23:16:29,108 | INFO     | intersect: -37987877339.31443
[2025-11-20 23:17:02] 2025-11-20 23:16:29,108 | INFO     | chi2: 2.9055843689566245
[2025-11-20 23:17:02] 2025-11-20 23:16:29,109 | INFO     | current chi2=2.9055843689566245 (change=15.81644113303221 %)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,109 | INFO     | right removable region: 517
[2025-11-20 23:17:02] 2025-11-20 23:16:29,109 | INFO     | sum of square deviations: 44360411290.61577
[2025-11-20 23:17:02] 2025-11-20 23:16:29,117 | INFO     | sum of deviations: 456395250998.53406
[2025-11-20 23:17:02] 2025-11-20 23:16:29,117 | INFO     | mean x: 1763664646.58891
[2025-11-20 23:17:02] 2025-11-20 23:16:29,117 | INFO     | mean y: 3441152.9885277245
[2025-11-20 23:17:02] 2025-11-20 23:16:29,117 | INFO     | intersect: -18141750598.8171
[2025-11-20 23:17:02] 2025-11-20 23:16:29,118 | INFO     | chi2: 4.260918491168249
[2025-11-20 23:17:02] 2025-11-20 23:16:29,118 | INFO     | current chi2=4.260918491168249 (change=37.471688811365645 %)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,119 | INFO     | sum of square deviations: 43100223055.552086
[2025-11-20 23:17:02] 2025-11-20 23:16:29,125 | INFO     | sum of deviations: 397009701026.4595
[2025-11-20 23:17:02] 2025-11-20 23:16:29,125 | INFO     | mean x: 1763664799.092664
[2025-11-20 23:17:02] 2025-11-20 23:16:29,126 | INFO     | mean y: 3448335.5945945946
[2025-11-20 23:17:02] 2025-11-20 23:16:29,126 | INFO     | intersect: -16242222451.217537
[2025-11-20 23:17:02] 2025-11-20 23:16:29,126 | INFO     | chi2: 4.120328817382875
[2025-11-20 23:17:02] 2025-11-20 23:16:29,126 | INFO     | current chi2=4.120328817382875 (change=3.29951568134381 %)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,126 | INFO     | left removable region: 20
[2025-11-20 23:17:02] 2025-11-20 23:16:29,127 | INFO     | sum of square deviations: 38068446950.6398
[2025-11-20 23:17:02] 2025-11-20 23:16:29,134 | INFO     | sum of deviations: 594875001896.6262
[2025-11-20 23:17:02] 2025-11-20 23:16:29,134 | INFO     | mean x: 1763664768.6237423
[2025-11-20 23:17:02] 2025-11-20 23:16:29,134 | INFO     | mean y: 3493157.2012072434
[2025-11-20 23:17:02] 2025-11-20 23:16:29,134 | INFO     | intersect: -27556340947.41621
[2025-11-20 23:17:02] 2025-11-20 23:16:29,135 | INFO     | chi2: 0.10154689035455394
[2025-11-20 23:17:02] 2025-11-20 23:16:29,135 | INFO     | current memory leak: 15.63 B/s (using 497 data points, chi2=0.10)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,136 | INFO     | could have reported an average CPU frequency of 2354 MHz (20 samples)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,136 | INFO     | ..............................
[2025-11-20 23:17:02] 2025-11-20 23:16:29,136 | INFO     | . Timing measurements:
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | . get job = 0 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | . initial setup = 1 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | . payload setup = 7 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | . stage-in = 0 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | . payload execution = 32163 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | . stage-out = 3 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | . log creation = 0 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,137 | INFO     | ..............................
[2025-11-20 23:17:02] 2025-11-20 23:16:29,239 | INFO     | 
[2025-11-20 23:17:02] 2025-11-20 23:16:29,239 | INFO     | job summary report
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | --------------------------------------------------
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | PanDA job id: 6891582715
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | task id: 47493068
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | errors: (none)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | pilot state: finished 
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | transexitcode: 0
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | exeerrorcode: 0
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | exeerrordiag: 
[2025-11-20 23:17:02] 2025-11-20 23:16:29,240 | INFO     | exitcode: 0
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | exitmsg: OK
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | cpuconsumptiontime: 254926 s
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | nevents: 1000
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | neventsw: 0
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | pid: 3642343
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | pgrp: 3642343
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | corecount: 12
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | event service: False
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | sizes: {0: 2298648, 1: 2298847, 7: 2299109, 11: 2299137, 32174: 2338454, 32178: 2347678, 32184: 2347868}
[2025-11-20 23:17:02] 2025-11-20 23:16:29,241 | INFO     | --------------------------------------------------
[2025-11-20 23:17:02] 2025-11-20 23:16:29,242 | INFO     | 
[2025-11-20 23:17:02] 2025-11-20 23:16:29,242 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/3
[2025-11-20 23:17:02] 2025-11-20 23:16:29,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,271 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,271 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:17:02] 2025-11-20 23:16:29,271 | INFO     | job 6891582715 has completed (purged errors)
[2025-11-20 23:17:02] 2025-11-20 23:16:29,271 | INFO     | overall cleanup function is called
[2025-11-20 23:17:02] 2025-11-20 23:16:30,291 | INFO     | --- collectZombieJob: --- 10, [3642343]
[2025-11-20 23:17:02] 2025-11-20 23:16:30,291 | INFO     | zombie collector waiting for pid 3642343
[2025-11-20 23:17:02] 2025-11-20 23:16:30,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:17:02] 2025-11-20 23:16:30,291 | INFO     | collected zombie processes
[2025-11-20 23:17:02] 2025-11-20 23:16:30,291 | INFO     | will attempt to kill all subprocesses of pid=3642343
[2025-11-20 23:17:02] 2025-11-20 23:16:30,835 | INFO     | process IDs to be killed: [3642343] (in reverse order)
[2025-11-20 23:17:02] 2025-11-20 23:16:31,057 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:17:02] 2025-11-20 23:16:31,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:17:02] 2025-11-20 23:16:31,073 | INFO     | did not find any defunct processes belonging to 3642343
[2025-11-20 23:17:02] 2025-11-20 23:16:31,088 | INFO     | did not find any defunct processes belonging to 3642343
[2025-11-20 23:17:02] 2025-11-20 23:16:31,089 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:17:02] 2025-11-20 23:16:31,090 | INFO     | ready for new job
[2025-11-20 23:17:02] 2025-11-20 23:16:31,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:17:02] 2025-11-20 23:16:31,093 | INFO     | ***************************************
[2025-11-20 23:17:02] 2025-11-20 23:16:31,094 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:17:02] 2025-11-20 23:16:31,094 | INFO     | ***************************************
[2025-11-20 23:17:02] 2025-11-20 23:16:31,094 | INFO     | 
[2025-11-20 23:17:02] 2025-11-20 23:16:31,120 | INFO     | architecture information:
[2025-11-20 23:17:02] 2025-11-20 23:16:31,120 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:17:02] 2025-11-20 23:16:31,141 | INFO     | cat /etc/os-release:
[2025-11-20 23:17:02] NAME="CentOS Linux"
[2025-11-20 23:17:02] VERSION="7 (Core)"
[2025-11-20 23:17:02] ID="centos"
[2025-11-20 23:17:02] ID_LIKE="rhel fedora"
[2025-11-20 23:17:02] VERSION_ID="7"
[2025-11-20 23:17:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:17:02] ANSI_COLOR="0;31"
[2025-11-20 23:17:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:17:02] HOME_URL="https://www.centos.org/"
[2025-11-20 23:17:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:17:02] 
[2025-11-20 23:17:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:17:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:17:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:17:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:17:02] 
[2025-11-20 23:17:02] 2025-11-20 23:16:31,141 | INFO     | ***************************************
[2025-11-20 23:17:02] 2025-11-20 23:16:31,644 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/3
[2025-11-20 23:17:02] 2025-11-20 23:16:31,664 | INFO     | sufficient remaining disk space (339129401344 B)
[2025-11-20 23:17:02] 2025-11-20 23:16:31,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:17:02] 2025-11-20 23:16:31,664 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:17:02] 2025-11-20 23:16:31,664 | INFO     | update_server=False
[2025-11-20 23:17:02] 2025-11-20 23:16:31,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:17:02] 2025-11-20 23:16:31,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:17:02] 2025-11-20 23:16:31,837 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 23:17:02] 2025-11-20 23:16:31,838 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 23:17:02] 2025-11-20 23:16:31,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:17:02] 2025-11-20 23:16:31,838 | INFO     | will abort loop
[2025-11-20 23:17:02] 2025-11-20 23:16:32,274 | INFO     | all data control threads have been joined
[2025-11-20 23:17:02] 2025-11-20 23:16:32,399 | INFO     | all job control threads have been joined
[2025-11-20 23:17:02] 2025-11-20 23:16:32,631 | INFO     | all payload control threads have been joined
[2025-11-20 23:17:02] 2025-11-20 23:16:32,667 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:32,844 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:32,975 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,091 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,197 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,280 | INFO     | [data] control thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,403 | INFO     | [job] control thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,465 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,539 | INFO     | [job] validate thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,635 | INFO     | [payload] control thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,667 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:33,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:17:02] 2025-11-20 23:16:33,975 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:34,087 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:34,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:17:02] 2025-11-20 23:16:35,255 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:37,679 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:42,087 | INFO     | job.realtimelogging is not enabled
[2025-11-20 23:17:02] 2025-11-20 23:16:42,959 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:17:02] 2025-11-20 23:16:43,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:17:02] 2025-11-20 23:16:43,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509506488128)>', '<ExcThread(monitor, started 140508647126784)>']
[2025-11-20 23:17:02] 2025-11-20 23:16:48,847 | INFO     | all workflow threads have been joined
[2025-11-20 23:17:02] 2025-11-20 23:16:48,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:17:02] 2025-11-20 23:16:48,847 | INFO     | traces error code: 0
[2025-11-20 23:17:02] 2025-11-20 23:16:48,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:17:02] 2025-11-20 23:17:01,660 | INFO     | PID=3627515 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 23:17:02] 2025-11-20 23:17:01,661 | INFO     | .. there are 13 such processes running
[2025-11-20 23:17:02] 2025-11-20 23:17:01,662 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:17:02] 2025-11-20 23:17:01,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:17:02] 2025-11-20 23:17:01,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:17:02] 2025-11-20 23:17:01,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:17:02] 2025-11-20 23:17:01,662 | INFO     | [monitor] control thread has ended
[2025-11-20 23:17:02] 2025-11-20 23:17:01,804 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:17:02] 2025-11-20 23:17:01,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:17:02] 2025-11-20 23:17:01,812 [wrapper] pilotpid: 3627515
[2025-11-20 23:17:02] 2025-11-20 23:17:01,816 [wrapper] Pilot exit status: 0
[2025-11-20 23:17:02] 2025-11-20 23:17:01,831 [wrapper] pandaids: 6891582715
[2025-11-20 23:17:02] 2025-11-20 23:17:01,946 [wrapper] cleanup supervisor_pilot  258559 3627516
[2025-11-20 23:17:02] 2025-11-20 23:17:01,950 [wrapper] Test setup, not cleaning
[2025-11-20 23:17:02] 2025-11-20 23:17:01,953 [wrapper] apfmon messages muted
[2025-11-20 23:17:02] 2025-11-20 23:17:01,957 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:17:02] 2025-11-20 23:17:01,960 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:17:02]  *** Error codes and diagnostics ***
[2025-11-20 23:17:02]     "exeErrorCode": 0,
[2025-11-20 23:17:02]     "exeErrorDiag": "",
[2025-11-20 23:17:02]     "pilotErrorCode": 0,
[2025-11-20 23:17:02]     "pilotErrorDiag": "",
[2025-11-20 23:17:02]  *** Listing of results directory ***
[2025-11-20 23:17:02] total 1305532
[2025-11-20 23:17:02] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:45 pilot3.tar.gz
[2025-11-20 23:17:02] -rw-r--r-- 1 boinc boinc      5112 Nov 18 17:05 queuedata.json
[2025-11-20 23:17:02] -rwx------ 1 boinc boinc     36292 Nov 18 17:06 runpilot2-wrapper.sh
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc       100 Nov 20 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:17:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 14:19 run_atlas
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc       105 Nov 20 14:19 job.xml
[2025-11-20 23:17:02] drwxrwx--x 2 boinc boinc      4096 Nov 20 14:19 shared
[2025-11-20 23:17:02] -rw-r--r-- 2 boinc boinc    590094 Nov 20 14:19 input.tar.gz
[2025-11-20 23:17:02] -rw-r--r-- 2 boinc boinc 409886089 Nov 20 14:19 EVNT.47493065._000430.pool.root.1
[2025-11-20 23:17:02] -rw-r--r-- 2 boinc boinc     15120 Nov 20 14:19 start_atlas.sh
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc      7039 Nov 20 14:19 init_data.xml
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc         0 Nov 20 14:19 boinc_setup_complete
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc         0 Nov 20 14:19 boinc_lockfile
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc      2773 Nov 20 14:19 pandaJob.out
[2025-11-20 23:17:02] -rw------- 1 boinc boinc    989440 Nov 20 14:19 agis_schedconf.cvmfs.json
[2025-11-20 23:17:02] drwx------ 5 boinc boinc      4096 Nov 20 14:19 pilot3
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc       533 Nov 20 23:06 boinc_task_state.xml
[2025-11-20 23:17:02] -rw------- 1 boinc boinc 910157567 Nov 20 23:15 HITS.47493068._004292.pool.root.1
[2025-11-20 23:17:02] -rw------- 1 boinc boinc      1034 Nov 20 23:16 memory_monitor_summary.json
[2025-11-20 23:17:02] -rw------- 1 boinc boinc   1526164 Nov 20 23:16 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:17:02] -rw------- 1 boinc boinc   2224913 Nov 20 23:16 log.47493068._004292.job.log.tgz.1
[2025-11-20 23:17:02] -rw------- 1 boinc boinc      8552 Nov 20 23:16 heartbeat.json
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc      8192 Nov 20 23:17 boinc_mmap_file
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc        29 Nov 20 23:17 wrapper_checkpoint.txt
[2025-11-20 23:17:02] -rw------- 1 boinc boinc       823 Nov 20 23:17 pilotlog.txt
[2025-11-20 23:17:02] -rw------- 1 boinc boinc        95 Nov 20 23:17 pilot_heartbeat.json
[2025-11-20 23:17:02] -rw------- 1 boinc boinc   4224214 Nov 20 23:17 log.47493068._004292.job.log.1
[2025-11-20 23:17:02] -rw------- 1 boinc boinc       353 Nov 20 23:17 output.list
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc       620 Nov 20 23:17 runtime_log
[2025-11-20 23:17:02] -rw------- 1 boinc boinc   6471680 Nov 20 23:17 result.tar.gz
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc      9008 Nov 20 23:17 runtime_log.err
[2025-11-20 23:17:02] -rw------- 1 boinc boinc       660 Nov 20 23:17 qpPODm0Kef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4WFKDm8rufkn.diag
[2025-11-20 23:17:02] -rw-rw-r-- 1 boinc boinc     21061 Nov 20 23:17 stderr.txt
[2025-11-20 23:17:02] HITS file was successfully produced:
[2025-11-20 23:17:02] -rw------- 1 boinc boinc 910157567 Nov 20 23:15 shared/HITS.pool.root.1
[2025-11-20 23:17:02]  *** Contents of shared directory: ***
[2025-11-20 23:17:02] total 1296032
[2025-11-20 23:17:02] -rw-r--r-- 2 boinc boinc    590094 Nov 20 14:19 input.tar.gz
[2025-11-20 23:17:02] -rw-r--r-- 2 boinc boinc 409886089 Nov 20 14:19 ATLAS.root_0
[2025-11-20 23:17:02] -rw-r--r-- 2 boinc boinc     15120 Nov 20 14:19 start_atlas.sh
[2025-11-20 23:17:02] -rw------- 1 boinc boinc 910157567 Nov 20 23:15 HITS.pool.root.1
[2025-11-20 23:17:02] -rw------- 1 boinc boinc   6471680 Nov 20 23:17 result.tar.gz
23:17:04 (3619550): run_atlas exited; CPU time 256089.042129
23:17:04 (3619550): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN