Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:22 (967206): wrapper (7.7.26015): starting
14:43:22 (967206): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 14:43:22] Arguments: --nthreads 12
[2025-11-23 14:43:22] Threads: 12
[2025-11-23 14:43:22] Checking for CVMFS
[2025-11-23 14:43:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 14:43:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 14:43:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 14:43:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 14:43:23] 2.13.3.0 11850 2812 75072 153210 3 81 3330913 4097024 1043 130560 0 2191774 99.990 94938 21779 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-23 14:43:23] CVMFS is ok
[2025-11-23 14:43:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 14:43:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 14:43:23] Further information can be found at the LHC@home message board.
[2025-11-23 14:43:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:43:23] Checking for apptainer binary...
[2025-11-23 14:43:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 14:43:23] Running /usr/bin/apptainer --version
[2025-11-23 14:43:23] apptainer version 1.4.4-1.el9
[2025-11-23 14:43:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:43:23] pckelar1.cern.ch
[2025-11-23 14:43:23] apptainer works
[2025-11-23 14:43:23] Set ATHENA_PROC_NUMBER=12
[2025-11-23 14:43:23] Set ATHENA_CORE_NUMBER=12
[2025-11-23 14:43:23] Starting ATLAS job with PandaID=6891586411
[2025-11-23 14:43:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:40:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:40:49] 2025-11-24 01:40:11,429 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:40:49] 2025-11-24 01:40:11,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:40:49] 2025-11-24 01:40:11,439 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:40:49] 2025-11-24 01:40:11,439 | INFO     | sum of square deviations: 108652304688.45436
[2025-11-24 02:40:49] 2025-11-24 01:40:11,448 | INFO     | sum of deviations: 1194439390808.7217
[2025-11-24 02:40:49] 2025-11-24 01:40:11,448 | INFO     | mean x: 1763926917.929078
[2025-11-24 02:40:49] 2025-11-24 01:40:11,448 | INFO     | mean y: 3591858.974468085
[2025-11-24 02:40:49] 2025-11-24 01:40:11,449 | INFO     | intersect: -19387656208.184093
[2025-11-24 02:40:49] 2025-11-24 01:40:11,449 | INFO     | chi2: 6.093656965815949
[2025-11-24 02:40:49] 2025-11-24 01:40:11,450 | INFO     | sum of square deviations: 106357075374.10689
[2025-11-24 02:40:49] 2025-11-24 01:40:11,458 | INFO     | sum of deviations: 1469906156321.3862
[2025-11-24 02:40:49] 2025-11-24 01:40:11,458 | INFO     | mean x: 1763926765.4357142
[2025-11-24 02:40:49] 2025-11-24 01:40:11,458 | INFO     | mean y: 3610145.0085714287
[2025-11-24 02:40:49] 2025-11-24 01:40:11,459 | INFO     | intersect: -24374709799.329205
[2025-11-24 02:40:49] 2025-11-24 01:40:11,459 | INFO     | chi2: 3.1767979137610274
[2025-11-24 02:40:49] 2025-11-24 01:40:11,459 | INFO     | current chi2=3.1767979137610274 (change=47.86713575145185 %)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,460 | INFO     | sum of square deviations: 104094404809.69775
[2025-11-24 02:40:49] 2025-11-24 01:40:11,468 | INFO     | sum of deviations: 1612570608109.532
[2025-11-24 02:40:49] 2025-11-24 01:40:11,468 | INFO     | mean x: 1763926612.942446
[2025-11-24 02:40:49] 2025-11-24 01:40:11,469 | INFO     | mean y: 3619751.4633093523
[2025-11-24 02:40:49] 2025-11-24 01:40:11,469 | INFO     | intersect: -27322116113.911358
[2025-11-24 02:40:49] 2025-11-24 01:40:11,469 | INFO     | chi2: 2.255428706649349
[2025-11-24 02:40:49] 2025-11-24 01:40:11,469 | INFO     | current chi2=2.255428706649349 (change=29.003078953198653 %)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,470 | INFO     | sum of square deviations: 101863933616.40735
[2025-11-24 02:40:49] 2025-11-24 01:40:11,478 | INFO     | sum of deviations: 1627343823131.4966
[2025-11-24 02:40:49] 2025-11-24 01:40:11,478 | INFO     | mean x: 1763926460.4449275
[2025-11-24 02:40:49] 2025-11-24 01:40:11,479 | INFO     | mean y: 3620751.513043478
[2025-11-24 02:40:49] 2025-11-24 01:40:11,479 | INFO     | intersect: -28176273033.787426
[2025-11-24 02:40:49] 2025-11-24 01:40:11,479 | INFO     | chi2: 2.1371300783048612
[2025-11-24 02:40:49] 2025-11-24 01:40:11,479 | INFO     | current chi2=2.1371300783048612 (change=5.245061747938444 %)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,479 | INFO     | right removable region: 689
[2025-11-24 02:40:49] 2025-11-24 01:40:11,480 | INFO     | sum of square deviations: 106356761469.84416
[2025-11-24 02:40:49] 2025-11-24 01:40:11,488 | INFO     | sum of deviations: 979586927983.5374
[2025-11-24 02:40:49] 2025-11-24 01:40:11,489 | INFO     | mean x: 1763927070.432857
[2025-11-24 02:40:49] 2025-11-24 01:40:11,489 | INFO     | mean y: 3606102.0114285713
[2025-11-24 02:40:49] 2025-11-24 01:40:11,489 | INFO     | intersect: -16242844769.87083
[2025-11-24 02:40:49] 2025-11-24 01:40:11,489 | INFO     | chi2: 4.210250695455534
[2025-11-24 02:40:49] 2025-11-24 01:40:11,489 | INFO     | current chi2=4.210250695455534 (change=30.90765169299654 %)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,490 | INFO     | sum of square deviations: 104093905469.82133
[2025-11-24 02:40:49] 2025-11-24 01:40:11,498 | INFO     | sum of deviations: 917979149695.1062
[2025-11-24 02:40:49] 2025-11-24 01:40:11,498 | INFO     | mean x: 1763927222.932374
[2025-11-24 02:40:49] 2025-11-24 01:40:11,499 | INFO     | mean y: 3610251.95971223
[2025-11-24 02:40:49] 2025-11-24 01:40:11,499 | INFO     | intersect: -15552040243.841501
[2025-11-24 02:40:49] 2025-11-24 01:40:11,499 | INFO     | chi2: 4.156811386938605
[2025-11-24 02:40:49] 2025-11-24 01:40:11,499 | INFO     | current chi2=4.156811386938605 (change=1.2692666632561986 %)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,499 | INFO     | left removable region: 20
[2025-11-24 02:40:49] 2025-11-24 01:40:11,500 | INFO     | sum of square deviations: 92843357404.27197
[2025-11-24 02:40:49] 2025-11-24 01:40:11,508 | INFO     | sum of deviations: 1265025197618.3555
[2025-11-24 02:40:49] 2025-11-24 01:40:11,508 | INFO     | mean x: 1763927039.949178
[2025-11-24 02:40:49] 2025-11-24 01:40:11,508 | INFO     | mean y: 3645547.0104633784
[2025-11-24 02:40:49] 2025-11-24 01:40:11,508 | INFO     | intersect: -24030514943.111973
[2025-11-24 02:40:49] 2025-11-24 01:40:11,509 | INFO     | chi2: 0.1736161396419416
[2025-11-24 02:40:49] 2025-11-24 01:40:11,509 | INFO     | current memory leak: 13.63 B/s (using 669 data points, chi2=0.17)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,509 | INFO     | could have reported an average CPU frequency of 2804 MHz (27 samples)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,509 | INFO     | ..............................
[2025-11-24 02:40:49] 2025-11-24 01:40:11,509 | INFO     | . Timing measurements:
[2025-11-24 02:40:49] 2025-11-24 01:40:11,509 | INFO     | . get job = 0 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,509 | INFO     | . initial setup = 1 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,510 | INFO     | . payload setup = 9 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,510 | INFO     | . stage-in = 0 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,510 | INFO     | . payload execution = 42962 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,510 | INFO     | . stage-out = 1 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,510 | INFO     | . log creation = 0 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,510 | INFO     | ..............................
[2025-11-24 02:40:49] 2025-11-24 01:40:11,574 | INFO     | 
[2025-11-24 02:40:49] 2025-11-24 01:40:11,574 | INFO     | job summary report
[2025-11-24 02:40:49] 2025-11-24 01:40:11,574 | INFO     | --------------------------------------------------
[2025-11-24 02:40:49] 2025-11-24 01:40:11,574 | INFO     | PanDA job id: 6891586411
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | task id: 47493068
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | errors: (none)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | pilot state: finished 
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | transexitcode: 0
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | exeerrorcode: 0
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | exeerrordiag: 
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | exitcode: 0
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | exitmsg: OK
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | cpuconsumptiontime: 500836 s
[2025-11-24 02:40:49] 2025-11-24 01:40:11,575 | INFO     | nevents: 1000
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | neventsw: 0
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | pid: 978534
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | pgrp: 978534
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | corecount: 12
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | event service: False
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | sizes: {0: 2298682, 1: 2298824, 6: 2299086, 12: 2299114, 42974: 2344184, 42976: 2353178, 42977: 2353362, 42980: 2353608}
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | --------------------------------------------------
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | 
[2025-11-24 02:40:49] 2025-11-24 01:40:11,576 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-24 02:40:49] 2025-11-24 01:40:11,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,594 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:40:49] 2025-11-24 01:40:11,594 | INFO     | job 6891586411 has completed (purged errors)
[2025-11-24 02:40:49] 2025-11-24 01:40:11,594 | INFO     | overall cleanup function is called
[2025-11-24 02:40:49] 2025-11-24 01:40:12,608 | INFO     | --- collectZombieJob: --- 10, [978534]
[2025-11-24 02:40:49] 2025-11-24 01:40:12,608 | INFO     | zombie collector waiting for pid 978534
[2025-11-24 02:40:49] 2025-11-24 01:40:12,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:40:49] 2025-11-24 01:40:12,609 | INFO     | collected zombie processes
[2025-11-24 02:40:49] 2025-11-24 01:40:12,609 | INFO     | will attempt to kill all subprocesses of pid=978534
[2025-11-24 02:40:49] 2025-11-24 01:40:12,718 | INFO     | process IDs to be killed: [978534] (in reverse order)
[2025-11-24 02:40:49] 2025-11-24 01:40:12,753 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:40:49] 2025-11-24 01:40:12,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:40:49] 2025-11-24 01:40:12,756 | INFO     | did not find any defunct processes belonging to 978534
[2025-11-24 02:40:49] 2025-11-24 01:40:12,759 | INFO     | did not find any defunct processes belonging to 978534
[2025-11-24 02:40:49] 2025-11-24 01:40:12,760 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:40:49] 2025-11-24 01:40:12,761 | INFO     | ready for new job
[2025-11-24 02:40:49] 2025-11-24 01:40:12,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:40:49] 2025-11-24 01:40:12,763 | INFO     | ***************************************
[2025-11-24 02:40:49] 2025-11-24 01:40:12,763 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:40:49] 2025-11-24 01:40:12,763 | INFO     | ***************************************
[2025-11-24 02:40:49] 2025-11-24 01:40:12,763 | INFO     | 
[2025-11-24 02:40:49] 2025-11-24 01:40:12,764 | INFO     | architecture information:
[2025-11-24 02:40:49] 2025-11-24 01:40:12,764 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:40:49] 2025-11-24 01:40:12,772 | INFO     | cat /etc/os-release:
[2025-11-24 02:40:49] NAME="CentOS Linux"
[2025-11-24 02:40:49] VERSION="7 (Core)"
[2025-11-24 02:40:49] ID="centos"
[2025-11-24 02:40:49] ID_LIKE="rhel fedora"
[2025-11-24 02:40:49] VERSION_ID="7"
[2025-11-24 02:40:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:40:49] ANSI_COLOR="0;31"
[2025-11-24 02:40:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:40:49] HOME_URL="https://www.centos.org/"
[2025-11-24 02:40:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:40:49] 
[2025-11-24 02:40:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:40:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:40:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:40:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:40:49] 
[2025-11-24 02:40:49] 2025-11-24 01:40:12,773 | INFO     | ***************************************
[2025-11-24 02:40:49] 2025-11-24 01:40:13,276 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-24 02:40:49] 2025-11-24 01:40:13,286 | INFO     | sufficient remaining disk space (775810973696 B)
[2025-11-24 02:40:49] 2025-11-24 01:40:13,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:40:49] 2025-11-24 01:40:13,286 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:40:49] 2025-11-24 01:40:13,286 | INFO     | update_server=False
[2025-11-24 02:40:49] 2025-11-24 01:40:13,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:40:49] 2025-11-24 01:40:13,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:40:49] 2025-11-24 01:40:13,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:40:49] 2025-11-24 01:40:13,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:40:49] 2025-11-24 01:40:13,287 | INFO     | aborting loop
[2025-11-24 02:40:49] 2025-11-24 01:40:13,443 | INFO     | all job control threads have been joined
[2025-11-24 02:40:49] 2025-11-24 01:40:13,749 | INFO     | all payload control threads have been joined
[2025-11-24 02:40:49] 2025-11-24 01:40:14,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:40:49] 2025-11-24 01:40:14,191 | INFO     | all data control threads have been joined
[2025-11-24 02:40:49] 2025-11-24 01:40:14,292 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,292 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,293 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,396 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,448 | INFO     | [job] control thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,471 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,655 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,661 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,754 | INFO     | [payload] control thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:14,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:15,196 | INFO     | [data] control thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:15,292 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:15,340 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:15,341 | INFO     | [job] validate thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:15,548 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:18,103 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:40:49] 2025-11-24 01:40:42,876 | INFO     | PID=971032 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 02:40:49] 2025-11-24 01:40:42,877 | INFO     | .. there are 2 such processes running
[2025-11-24 02:40:49] 2025-11-24 01:40:42,877 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:40:49] 2025-11-24 01:40:42,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:40:49] 2025-11-24 01:40:42,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:40:49] 2025-11-24 01:40:44,572 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:40:49] 2025-11-24 01:40:44,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701384705856)>', '<ExcThread(monitor, started 140700880451328)>']
[2025-11-24 02:40:49] 2025-11-24 01:40:44,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:40:49] 2025-11-24 01:40:44,887 | INFO     | [monitor] control thread has ended
[2025-11-24 02:40:49] 2025-11-24 01:40:49,685 | INFO     | all workflow threads have been joined
[2025-11-24 02:40:49] 2025-11-24 01:40:49,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:40:49] 2025-11-24 01:40:49,686 | INFO     | traces error code: 0
[2025-11-24 02:40:49] 2025-11-24 01:40:49,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:40:49] 2025-11-24 01:40:49,775 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:40:49] 2025-11-24 01:40:49,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:40:49] 2025-11-24 01:40:49,779 [wrapper] pilotpid: 971032
[2025-11-24 02:40:49] 2025-11-24 01:40:49,781 [wrapper] Pilot exit status: 0
[2025-11-24 02:40:49] 2025-11-24 01:40:49,788 [wrapper] pandaids: 6891586411
[2025-11-24 02:40:49] 2025-11-24 01:40:49,809 [wrapper] cleanup supervisor_pilot 1208496 971033
[2025-11-24 02:40:49] 2025-11-24 01:40:49,811 [wrapper] Test setup, not cleaning
[2025-11-24 02:40:49] 2025-11-24 01:40:49,813 [wrapper] apfmon messages muted
[2025-11-24 02:40:49] 2025-11-24 01:40:49,815 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:40:49] 2025-11-24 01:40:49,816 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:40:49]  *** Error codes and diagnostics ***
[2025-11-24 02:40:49]     "exeErrorCode": 0,
[2025-11-24 02:40:49]     "exeErrorDiag": "",
[2025-11-24 02:40:49]     "pilotErrorCode": 0,
[2025-11-24 02:40:49]     "pilotErrorDiag": "",
[2025-11-24 02:40:49]  *** Listing of results directory ***
[2025-11-24 02:40:49] total 1318988
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-24 02:40:49] -rwx------ 1 boinc boinc     36292 Nov 18 18:31 runpilot2-wrapper.sh
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:31 queuedata.json
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc       100 Nov 23 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:40:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 14:43 run_atlas
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc       105 Nov 23 14:43 job.xml
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc      6295 Nov 23 14:43 init_data.xml
[2025-11-24 02:40:49] -rw-r--r-- 2 boinc boinc 411445138 Nov 23 14:43 EVNT.47493065._000489.pool.root.1
[2025-11-24 02:40:49] drwxrwx--x 2 boinc boinc        68 Nov 23 14:43 shared
[2025-11-24 02:40:49] -rw-r--r-- 2 boinc boinc    590093 Nov 23 14:43 input.tar.gz
[2025-11-24 02:40:49] -rw-r--r-- 2 boinc boinc     15120 Nov 23 14:43 start_atlas.sh
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc         0 Nov 23 14:43 boinc_lockfile
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc      2773 Nov 23 14:43 pandaJob.out
[2025-11-24 02:40:49] -rw------- 1 boinc boinc    989785 Nov 23 14:43 agis_schedconf.cvmfs.json
[2025-11-24 02:40:49] drwx------ 5 boinc boinc      4096 Nov 23 14:43 pilot3
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc       533 Nov 24 02:26 boinc_task_state.xml
[2025-11-24 02:40:49] -rw------- 1 boinc boinc 918368763 Nov 24 02:39 HITS.47493068._004883.pool.root.1
[2025-11-24 02:40:49] -rw------- 1 boinc boinc      1038 Nov 24 02:40 memory_monitor_summary.json
[2025-11-24 02:40:49] -rw------- 1 boinc boinc        95 Nov 24 02:40 pilot_heartbeat.json
[2025-11-24 02:40:49] -rw------- 1 boinc boinc   1526164 Nov 24 02:40 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:40:49] -rw------- 1 boinc boinc   2392035 Nov 24 02:40 log.47493068._004883.job.log.tgz.1
[2025-11-24 02:40:49] -rw------- 1 boinc boinc      8611 Nov 24 02:40 heartbeat.json
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc      8192 Nov 24 02:40 boinc_mmap_file
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc        29 Nov 24 02:40 wrapper_checkpoint.txt
[2025-11-24 02:40:49] -rw------- 1 boinc boinc      4823 Nov 24 02:40 pilotlog.txt
[2025-11-24 02:40:49] -rw------- 1 boinc boinc   6067606 Nov 24 02:40 log.47493068._004883.job.log.1
[2025-11-24 02:40:49] -rw------- 1 boinc boinc       353 Nov 24 02:40 output.list
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc       620 Nov 24 02:40 runtime_log
[2025-11-24 02:40:49] -rw------- 1 boinc boinc   8478720 Nov 24 02:40 result.tar.gz
[2025-11-24 02:40:49] -rw------- 1 boinc boinc       665 Nov 24 02:40 VJuLDm5ief8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIaFKDmm3xZ9n.diag
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc      8728 Nov 24 02:40 runtime_log.err
[2025-11-24 02:40:49] -rw-r--r-- 1 boinc boinc     21102 Nov 24 02:40 stderr.txt
[2025-11-24 02:40:49] HITS file was successfully produced:
[2025-11-24 02:40:49] -rw------- 1 boinc boinc 918368763 Nov 24 02:39 shared/HITS.pool.root.1
[2025-11-24 02:40:49]  *** Contents of shared directory: ***
[2025-11-24 02:40:49] total 1307528
[2025-11-24 02:40:49] -rw-r--r-- 2 boinc boinc 411445138 Nov 23 14:43 ATLAS.root_0
[2025-11-24 02:40:49] -rw-r--r-- 2 boinc boinc    590093 Nov 23 14:43 input.tar.gz
[2025-11-24 02:40:49] -rw-r--r-- 2 boinc boinc     15120 Nov 23 14:43 start_atlas.sh
[2025-11-24 02:40:49] -rw------- 1 boinc boinc 918368763 Nov 24 02:39 HITS.pool.root.1
[2025-11-24 02:40:49] -rw------- 1 boinc boinc   8478720 Nov 24 02:40 result.tar.gz
02:40:51 (967206): run_atlas exited; CPU time 501127.895775
02:40:51 (967206): called boinc_finish(0)

</stderr_txt>
]]>

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