Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:57:19 (990698): wrapper (7.7.26015): starting
14:57:19 (990698): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 14:57:19] Arguments: --nthreads 12
[2025-11-23 14:57:19] Threads: 12
[2025-11-23 14:57:19] Checking for CVMFS
[2025-11-23 14:57:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 14:57:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 14:57:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 14:57:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 14:57:20] 2.13.3.0 11850 2826 74344 153210 1 90 3331992 4097025 1043 130560 0 2279266 99.990 95019 21683 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-23 14:57:20] CVMFS is ok
[2025-11-23 14:57:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 14:57:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 14:57:20] Further information can be found at the LHC@home message board.
[2025-11-23 14:57:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:57:20] Checking for apptainer binary...
[2025-11-23 14:57:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 14:57:20] Running /usr/bin/apptainer --version
[2025-11-23 14:57:20] apptainer version 1.4.4-1.el9
[2025-11-23 14:57:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:57:20] pckelar1.cern.ch
[2025-11-23 14:57:20] apptainer works
[2025-11-23 14:57:20] Set ATHENA_PROC_NUMBER=12
[2025-11-23 14:57:20] Set ATHENA_CORE_NUMBER=12
[2025-11-23 14:57:20] Starting ATLAS job with PandaID=6891592057
[2025-11-23 14:57:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:46:48]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:46:48] 2025-11-24 01:46:09,037 | INFO     | monitor loop #3117: job 0:6891592057 is in state 'finished'
[2025-11-24 02:46:48] 2025-11-24 01:46:09,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:46:48] 2025-11-24 01:46:09,970 | INFO     | time since job start (42518s) is within the limit (172800.0s)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,095 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 02:46:48] 2025-11-24 01:46:10,101 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2841.850458333333
[2025-11-24 02:46:48] 2025-11-24 01:46:10,106 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6891592057/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,107 | INFO     | extracted standard info from prmon json
[2025-11-24 02:46:48] 2025-11-24 01:46:10,108 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:46:48] 2025-11-24 01:46:10,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:46:48] 2025-11-24 01:46:10,128 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:46:48] 2025-11-24 01:46:10,129 | INFO     | sum of square deviations: 104995913059.9285
[2025-11-24 02:46:48] 2025-11-24 01:46:10,145 | INFO     | sum of deviations: 1809280380734.0374
[2025-11-24 02:46:48] 2025-11-24 01:46:10,145 | INFO     | mean x: 1763927509.7015781
[2025-11-24 02:46:48] 2025-11-24 01:46:10,146 | INFO     | mean y: 3600080.3271162123
[2025-11-24 02:46:48] 2025-11-24 01:46:10,146 | INFO     | intersect: -30392244322.85966
[2025-11-24 02:46:48] 2025-11-24 01:46:10,147 | INFO     | chi2: 6.091690176316035
[2025-11-24 02:46:48] 2025-11-24 01:46:10,148 | INFO     | sum of square deviations: 102752615487.44937
[2025-11-24 02:46:48] 2025-11-24 01:46:10,163 | INFO     | sum of deviations: 2080132135135.9421
[2025-11-24 02:46:48] 2025-11-24 01:46:10,164 | INFO     | mean x: 1763927357.2066474
[2025-11-24 02:46:48] 2025-11-24 01:46:10,164 | INFO     | mean y: 3618475.0563583816
[2025-11-24 02:46:48] 2025-11-24 01:46:10,164 | INFO     | intersect: -35705467491.900215
[2025-11-24 02:46:48] 2025-11-24 01:46:10,165 | INFO     | chi2: 3.1593932629736576
[2025-11-24 02:46:48] 2025-11-24 01:46:10,165 | INFO     | current chi2=3.1593932629736576 (change=48.13601526786268 %)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,166 | INFO     | sum of square deviations: 100541462597.35776
[2025-11-24 02:46:48] 2025-11-24 01:46:10,182 | INFO     | sum of deviations: 2168626013257.4465
[2025-11-24 02:46:48] 2025-11-24 01:46:10,182 | INFO     | mean x: 1763927204.7103348
[2025-11-24 02:46:48] 2025-11-24 01:46:10,182 | INFO     | mean y: 3624558.7962154294
[2025-11-24 02:46:48] 2025-11-24 01:46:10,182 | INFO     | intersect: -38043349523.39556
[2025-11-24 02:46:48] 2025-11-24 01:46:10,183 | INFO     | chi2: 2.521854225594908
[2025-11-24 02:46:48] 2025-11-24 01:46:10,184 | INFO     | current chi2=2.521854225594908 (change=20.179160500541503 %)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,184 | INFO     | right removable region: 686
[2025-11-24 02:46:48] 2025-11-24 01:46:10,185 | INFO     | sum of square deviations: 102752401866.26973
[2025-11-24 02:46:48] 2025-11-24 01:46:10,201 | INFO     | sum of deviations: 1574437484688.384
[2025-11-24 02:46:48] 2025-11-24 01:46:10,201 | INFO     | mean x: 1763927662.2037573
[2025-11-24 02:46:48] 2025-11-24 01:46:10,201 | INFO     | mean y: 3616012.6213872833
[2025-11-24 02:46:48] 2025-11-24 01:46:10,201 | INFO     | intersect: -27024402614.785583
[2025-11-24 02:46:48] 2025-11-24 01:46:10,202 | INFO     | chi2: 3.9329501838776277
[2025-11-24 02:46:48] 2025-11-24 01:46:10,202 | INFO     | current chi2=3.9329501838776277 (change=35.43745545089279 %)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,204 | INFO     | sum of square deviations: 100541119779.01598
[2025-11-24 02:46:48] 2025-11-24 01:46:10,218 | INFO     | sum of deviations: 1490139893230.0906
[2025-11-24 02:46:48] 2025-11-24 01:46:10,219 | INFO     | mean x: 1763927814.7045124
[2025-11-24 02:46:48] 2025-11-24 01:46:10,219 | INFO     | mean y: 3621824.906841339
[2025-11-24 02:46:48] 2025-11-24 01:46:10,219 | INFO     | intersect: -26139902449.00885
[2025-11-24 02:46:48] 2025-11-24 01:46:10,220 | INFO     | chi2: 3.842138845266986
[2025-11-24 02:46:48] 2025-11-24 01:46:10,220 | INFO     | current chi2=3.842138845266986 (change=2.30898776656021 %)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,220 | INFO     | left removable region: 20
[2025-11-24 02:46:48] 2025-11-24 01:46:10,221 | INFO     | sum of square deviations: 91600376948.57037
[2025-11-24 02:46:48] 2025-11-24 01:46:10,236 | INFO     | sum of deviations: 1721780854030.2314
[2025-11-24 02:46:48] 2025-11-24 01:46:10,236 | INFO     | mean x: 1763927784.2102103
[2025-11-24 02:46:48] 2025-11-24 01:46:10,236 | INFO     | mean y: 3655417.3483483484
[2025-11-24 02:46:48] 2025-11-24 01:46:10,237 | INFO     | intersect: -33152289873.688038
[2025-11-24 02:46:48] 2025-11-24 01:46:10,238 | INFO     | chi2: 0.21431851047578498
[2025-11-24 02:46:48] 2025-11-24 01:46:10,238 | INFO     | current memory leak: 18.80 B/s (using 666 data points, chi2=0.21)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,239 | INFO     | could have reported an average CPU frequency of 2803 MHz (27 samples)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,239 | INFO     | ..............................
[2025-11-24 02:46:48] 2025-11-24 01:46:10,239 | INFO     | . Timing measurements:
[2025-11-24 02:46:48] 2025-11-24 01:46:10,239 | INFO     | . get job = 0 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,239 | INFO     | . initial setup = 1 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,240 | INFO     | . payload setup = 8 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,240 | INFO     | . stage-in = 0 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,240 | INFO     | . payload execution = 42477 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,240 | INFO     | . stage-out = 2 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,240 | INFO     | . log creation = 0 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,240 | INFO     | ..............................
[2025-11-24 02:46:48] 2025-11-24 01:46:10,402 | INFO     | 
[2025-11-24 02:46:48] 2025-11-24 01:46:10,402 | INFO     | job summary report
[2025-11-24 02:46:48] 2025-11-24 01:46:10,403 | INFO     | --------------------------------------------------
[2025-11-24 02:46:48] 2025-11-24 01:46:10,403 | INFO     | PanDA job id: 6891592057
[2025-11-24 02:46:48] 2025-11-24 01:46:10,403 | INFO     | task id: 47493068
[2025-11-24 02:46:48] 2025-11-24 01:46:10,403 | INFO     | errors: (none)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:46:48] 2025-11-24 01:46:10,403 | INFO     | pilot state: finished 
[2025-11-24 02:46:48] 2025-11-24 01:46:10,403 | INFO     | transexitcode: 0
[2025-11-24 02:46:48] 2025-11-24 01:46:10,404 | INFO     | exeerrorcode: 0
[2025-11-24 02:46:48] 2025-11-24 01:46:10,404 | INFO     | exeerrordiag: 
[2025-11-24 02:46:48] 2025-11-24 01:46:10,404 | INFO     | exitcode: 0
[2025-11-24 02:46:48] 2025-11-24 01:46:10,404 | INFO     | exitmsg: OK
[2025-11-24 02:46:48] 2025-11-24 01:46:10,404 | INFO     | cpuconsumptiontime: 496037 s
[2025-11-24 02:46:48] 2025-11-24 01:46:10,404 | INFO     | nevents: 1000
[2025-11-24 02:46:48] 2025-11-24 01:46:10,405 | INFO     | neventsw: 0
[2025-11-24 02:46:48] 2025-11-24 01:46:10,405 | INFO     | pid: 1002086
[2025-11-24 02:46:48] 2025-11-24 01:46:10,405 | INFO     | pgrp: 1002086
[2025-11-24 02:46:48] 2025-11-24 01:46:10,405 | INFO     | corecount: 12
[2025-11-24 02:46:48] 2025-11-24 01:46:10,405 | INFO     | event service: False
[2025-11-24 02:46:48] 2025-11-24 01:46:10,405 | INFO     | sizes: {0: 2298625, 1: 2298824, 6: 2299086, 12: 2299114, 42489: 2344045, 42492: 2353039, 42495: 2353223, 42502: 2353469}
[2025-11-24 02:46:48] 2025-11-24 01:46:10,405 | INFO     | --------------------------------------------------
[2025-11-24 02:46:48] 2025-11-24 01:46:10,406 | INFO     | 
[2025-11-24 02:46:48] 2025-11-24 01:46:10,406 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-24 02:46:48] 2025-11-24 01:46:10,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:46:48] 2025-11-24 01:46:10,428 | INFO     | job 6891592057 has completed (purged errors)
[2025-11-24 02:46:48] 2025-11-24 01:46:10,429 | INFO     | overall cleanup function is called
[2025-11-24 02:46:48] 2025-11-24 01:46:11,453 | INFO     | --- collectZombieJob: --- 10, [1002086]
[2025-11-24 02:46:48] 2025-11-24 01:46:11,453 | INFO     | zombie collector waiting for pid 1002086
[2025-11-24 02:46:48] 2025-11-24 01:46:11,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:46:48] 2025-11-24 01:46:11,453 | INFO     | collected zombie processes
[2025-11-24 02:46:48] 2025-11-24 01:46:11,453 | INFO     | will attempt to kill all subprocesses of pid=1002086
[2025-11-24 02:46:48] 2025-11-24 01:46:11,646 | INFO     | process IDs to be killed: [1002086] (in reverse order)
[2025-11-24 02:46:48] 2025-11-24 01:46:11,704 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:46:48] 2025-11-24 01:46:11,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:46:48] 2025-11-24 01:46:11,712 | INFO     | did not find any defunct processes belonging to 1002086
[2025-11-24 02:46:48] 2025-11-24 01:46:11,718 | INFO     | did not find any defunct processes belonging to 1002086
[2025-11-24 02:46:48] 2025-11-24 01:46:11,720 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:46:48] 2025-11-24 01:46:11,720 | INFO     | ready for new job
[2025-11-24 02:46:48] 2025-11-24 01:46:11,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:46:48] 2025-11-24 01:46:11,724 | INFO     | ***************************************
[2025-11-24 02:46:48] 2025-11-24 01:46:11,724 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:46:48] 2025-11-24 01:46:11,724 | INFO     | ***************************************
[2025-11-24 02:46:48] 2025-11-24 01:46:11,724 | INFO     | 
[2025-11-24 02:46:48] 2025-11-24 01:46:11,726 | INFO     | architecture information:
[2025-11-24 02:46:48] 2025-11-24 01:46:11,726 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:46:48] 2025-11-24 01:46:11,742 | INFO     | cat /etc/os-release:
[2025-11-24 02:46:48] NAME="CentOS Linux"
[2025-11-24 02:46:48] VERSION="7 (Core)"
[2025-11-24 02:46:48] ID="centos"
[2025-11-24 02:46:48] ID_LIKE="rhel fedora"
[2025-11-24 02:46:48] VERSION_ID="7"
[2025-11-24 02:46:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:46:48] ANSI_COLOR="0;31"
[2025-11-24 02:46:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:46:48] HOME_URL="https://www.centos.org/"
[2025-11-24 02:46:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:46:48] 
[2025-11-24 02:46:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:46:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:46:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:46:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:46:48] 
[2025-11-24 02:46:48] 2025-11-24 01:46:11,742 | INFO     | ***************************************
[2025-11-24 02:46:48] 2025-11-24 01:46:12,245 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-24 02:46:48] 2025-11-24 01:46:12,261 | INFO     | sufficient remaining disk space (776742109184 B)
[2025-11-24 02:46:48] 2025-11-24 01:46:12,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:46:48] 2025-11-24 01:46:12,262 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:46:48] 2025-11-24 01:46:12,262 | INFO     | update_server=False
[2025-11-24 02:46:48] 2025-11-24 01:46:12,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:46:48] 2025-11-24 01:46:12,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:46:48] 2025-11-24 01:46:12,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:46:48] 2025-11-24 01:46:12,546 | INFO     | aborting loop
[2025-11-24 02:46:48] 2025-11-24 01:46:12,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:46:48] 2025-11-24 01:46:13,149 | INFO     | all data control threads have been joined
[2025-11-24 02:46:48] 2025-11-24 01:46:13,268 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:13,269 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:13,334 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:13,552 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:13,566 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:13,605 | INFO     | all payload control threads have been joined
[2025-11-24 02:46:48] 2025-11-24 01:46:13,616 | INFO     | all job control threads have been joined
[2025-11-24 02:46:48] 2025-11-24 01:46:13,918 | INFO     | [job] validate thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:46:48] 2025-11-24 01:46:14,154 | INFO     | [data] control thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,287 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,450 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,610 | INFO     | [payload] control thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,620 | INFO     | [job] control thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,637 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,690 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:14,991 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:18,020 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:46:48] 2025-11-24 01:46:40,940 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:46:48] 2025-11-24 01:46:42,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016330827584)>', '<ExcThread(monitor, started 140015833167616)>']
[2025-11-24 02:46:48] 2025-11-24 01:46:43,285 | INFO     | PID=994529 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 02:46:48] 2025-11-24 01:46:43,285 | INFO     | .. there are 2 such processes running
[2025-11-24 02:46:48] 2025-11-24 01:46:43,286 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:46:48] 2025-11-24 01:46:43,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:46:48] 2025-11-24 01:46:43,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:46:48] 2025-11-24 01:46:43,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:46:48] 2025-11-24 01:46:43,286 | INFO     | [monitor] control thread has ended
[2025-11-24 02:46:48] 2025-11-24 01:46:47,760 | INFO     | all workflow threads have been joined
[2025-11-24 02:46:48] 2025-11-24 01:46:47,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:46:48] 2025-11-24 01:46:47,761 | INFO     | traces error code: 0
[2025-11-24 02:46:48] 2025-11-24 01:46:47,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:46:48] 2025-11-24 01:46:47,872 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:46:48] 2025-11-24 01:46:47,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:46:48] 2025-11-24 01:46:47,878 [wrapper] pilotpid: 994529
[2025-11-24 02:46:48] 2025-11-24 01:46:47,880 [wrapper] Pilot exit status: 0
[2025-11-24 02:46:48] 2025-11-24 01:46:47,890 [wrapper] pandaids: 6891592057
[2025-11-24 02:46:48] 2025-11-24 01:46:47,925 [wrapper] cleanup supervisor_pilot 1233581 994530
[2025-11-24 02:46:48] 2025-11-24 01:46:47,928 [wrapper] Test setup, not cleaning
[2025-11-24 02:46:48] 2025-11-24 01:46:47,931 [wrapper] apfmon messages muted
[2025-11-24 02:46:48] 2025-11-24 01:46:47,934 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:46:48] 2025-11-24 01:46:47,936 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:46:48]  *** Error codes and diagnostics ***
[2025-11-24 02:46:48]     "exeErrorCode": 0,
[2025-11-24 02:46:48]     "exeErrorDiag": "",
[2025-11-24 02:46:48]     "pilotErrorCode": 0,
[2025-11-24 02:46:48]     "pilotErrorDiag": "",
[2025-11-24 02:46:48]  *** Listing of results directory ***
[2025-11-24 02:46:48] total 1313332
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc      5112 Nov 18 19:18 queuedata.json
[2025-11-24 02:46:48] -rwx------ 1 boinc boinc     36292 Nov 18 19:18 runpilot2-wrapper.sh
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc       100 Nov 23 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:46:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 14:57 run_atlas
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc       105 Nov 23 14:57 job.xml
[2025-11-24 02:46:48] -rw-r--r-- 2 boinc boinc 407604506 Nov 23 14:57 EVNT.47493065._000637.pool.root.1
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc      6295 Nov 23 14:57 init_data.xml
[2025-11-24 02:46:48] drwxrwx--x 2 boinc boinc        68 Nov 23 14:57 shared
[2025-11-24 02:46:48] -rw-r--r-- 2 boinc boinc    590101 Nov 23 14:57 input.tar.gz
[2025-11-24 02:46:48] -rw-r--r-- 2 boinc boinc     15120 Nov 23 14:57 start_atlas.sh
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc         0 Nov 23 14:57 boinc_lockfile
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc      2773 Nov 23 14:57 pandaJob.out
[2025-11-24 02:46:48] -rw------- 1 boinc boinc    989785 Nov 23 14:57 agis_schedconf.cvmfs.json
[2025-11-24 02:46:48] drwx------ 5 boinc boinc      4096 Nov 23 14:57 pilot3
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc       533 Nov 24 02:36 boinc_task_state.xml
[2025-11-24 02:46:48] -rw------- 1 boinc boinc 916467632 Nov 24 02:45 HITS.47493068._005864.pool.root.1
[2025-11-24 02:46:48] -rw------- 1 boinc boinc      1038 Nov 24 02:45 memory_monitor_summary.json
[2025-11-24 02:46:48] -rw------- 1 boinc boinc        95 Nov 24 02:45 pilot_heartbeat.json
[2025-11-24 02:46:48] -rw------- 1 boinc boinc   1526164 Nov 24 02:45 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:46:48] -rw------- 1 boinc boinc   2391927 Nov 24 02:45 log.47493068._005864.job.log.tgz.1
[2025-11-24 02:46:48] -rw------- 1 boinc boinc      8611 Nov 24 02:46 heartbeat.json
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc        29 Nov 24 02:46 wrapper_checkpoint.txt
[2025-11-24 02:46:48] -rw------- 1 boinc boinc      4823 Nov 24 02:46 pilotlog.txt
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc      8192 Nov 24 02:46 boinc_mmap_file
[2025-11-24 02:46:48] -rw------- 1 boinc boinc   6042598 Nov 24 02:46 log.47493068._005864.job.log.1
[2025-11-24 02:46:48] -rw------- 1 boinc boinc       353 Nov 24 02:46 output.list
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc       620 Nov 24 02:46 runtime_log
[2025-11-24 02:46:48] -rw------- 1 boinc boinc   8458240 Nov 24 02:46 result.tar.gz
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc      8728 Nov 24 02:46 runtime_log.err
[2025-11-24 02:46:48] -rw------- 1 boinc boinc       665 Nov 24 02:46 LtXMDm9Sff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEgFKDmLVBeNm.diag
[2025-11-24 02:46:48] -rw-r--r-- 1 boinc boinc     21323 Nov 24 02:46 stderr.txt
[2025-11-24 02:46:48] HITS file was successfully produced:
[2025-11-24 02:46:48] -rw------- 1 boinc boinc 916467632 Nov 24 02:45 shared/HITS.pool.root.1
[2025-11-24 02:46:48]  *** Contents of shared directory: ***
[2025-11-24 02:46:48] total 1301896
[2025-11-24 02:46:48] -rw-r--r-- 2 boinc boinc 407604506 Nov 23 14:57 ATLAS.root_0
[2025-11-24 02:46:48] -rw-r--r-- 2 boinc boinc    590101 Nov 23 14:57 input.tar.gz
[2025-11-24 02:46:48] -rw-r--r-- 2 boinc boinc     15120 Nov 23 14:57 start_atlas.sh
[2025-11-24 02:46:48] -rw------- 1 boinc boinc 916467632 Nov 24 02:45 HITS.pool.root.1
[2025-11-24 02:46:48] -rw------- 1 boinc boinc   8458240 Nov 24 02:46 result.tar.gz
02:46:50 (990698): run_atlas exited; CPU time 496398.003552
02:46:50 (990698): called boinc_finish(0)

</stderr_txt>
]]>

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