Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:06:21 (2739378): wrapper (7.7.26015): starting
00:06:21 (2739378): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 00:06:21] Arguments: --nthreads 8
[2025-11-19 00:06:21] Threads: 8
[2025-11-19 00:06:21] Checking for CVMFS
[2025-11-19 00:06:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 00:06:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 00:06:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 00:06:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 00:06:23] 2.13.3.0 17216 19392 443952 153031 2 152 22562558 32935936 67097 16776704 0 327973463 99.654 279077551 52238 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 00:06:23] CVMFS is ok
[2025-11-19 00:06:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 00:06:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 00:06:23] Further information can be found at the LHC@home message board.
[2025-11-19 00:06:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 00:06:23] Checking for apptainer binary...
[2025-11-19 00:06:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 00:06:23] Running /usr/bin/apptainer --version
[2025-11-19 00:06:23] apptainer version 1.4.4-1.el9
[2025-11-19 00:06:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 00:06:24] c7-9-14.aglt2.org
[2025-11-19 00:06:24] apptainer works
[2025-11-19 00:06:24] Set ATHENA_PROC_NUMBER=8
[2025-11-19 00:06:24] Set ATHENA_CORE_NUMBER=8
[2025-11-19 00:06:24] Starting ATLAS job with PandaID=6891601180
[2025-11-19 00:06:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 08:50:14]  *** The last 200 lines of the pilot log: ***
[2025-11-19 08:50:14] 2025-11-19 13:49:28,765 | INFO     | sum of square deviations: 40170638203.38328
[2025-11-19 08:50:14] 2025-11-19 13:49:28,772 | INFO     | sum of deviations: 915718922686.6923
[2025-11-19 08:50:14] 2025-11-19 13:49:28,773 | INFO     | mean x: 1763544699.6482213
[2025-11-19 08:50:14] 2025-11-19 13:49:28,773 | INFO     | mean y: 2764191.324110672
[2025-11-19 08:50:14] 2025-11-19 13:49:28,773 | INFO     | intersect: -40198520246.713104
[2025-11-19 08:50:14] 2025-11-19 13:49:28,773 | INFO     | chi2: 17.671975006284875
[2025-11-19 08:50:14] 2025-11-19 13:49:28,773 | INFO     | sum of square deviations: 38991658409.22543
[2025-11-19 08:50:14] 2025-11-19 13:49:28,780 | INFO     | sum of deviations: 1072470216090.0776
[2025-11-19 08:50:14] 2025-11-19 13:49:28,781 | INFO     | mean x: 1763544547.1596806
[2025-11-19 08:50:14] 2025-11-19 13:49:28,781 | INFO     | mean y: 2784467.736526946
[2025-11-19 08:50:14] 2025-11-19 13:49:28,781 | INFO     | intersect: -48503718685.49502
[2025-11-19 08:50:14] 2025-11-19 13:49:28,781 | INFO     | chi2: 14.848704308006997
[2025-11-19 08:50:14] 2025-11-19 13:49:28,781 | INFO     | current chi2=14.848704308006997 (change=15.975977202739406 %)
[2025-11-19 08:50:14] 2025-11-19 13:49:28,781 | INFO     | right removable region: 500
[2025-11-19 08:50:14] 2025-11-19 13:49:28,781 | INFO     | sum of square deviations: 38991303999.225464
[2025-11-19 08:50:14] 2025-11-19 13:49:28,788 | INFO     | sum of deviations: 708067737570.7306
[2025-11-19 08:50:14] 2025-11-19 13:49:28,789 | INFO     | mean x: 1763544852.1596806
[2025-11-19 08:50:14] 2025-11-19 13:49:28,789 | INFO     | mean y: 2791041.0658682636
[2025-11-19 08:50:14] 2025-11-19 13:49:28,789 | INFO     | intersect: -32022534749.47498
[2025-11-19 08:50:14] 2025-11-19 13:49:28,789 | INFO     | chi2: 12.43804378847017
[2025-11-19 08:50:14] 2025-11-19 13:49:28,789 | INFO     | current chi2=12.43804378847017 (change=29.61712664234363 %)
[2025-11-19 08:50:14] 2025-11-19 13:49:28,789 | INFO     | sum of square deviations: 37835272557.433655
[2025-11-19 08:50:14] 2025-11-19 13:49:28,951 | INFO     | sum of deviations: 532594686963.18756
[2025-11-19 08:50:14] 2025-11-19 13:49:28,951 | INFO     | mean x: 1763545004.671371
[2025-11-19 08:50:14] 2025-11-19 13:49:28,951 | INFO     | mean y: 2814182.0625
[2025-11-19 08:50:14] 2025-11-19 13:49:28,951 | INFO     | intersect: -24822028781.144928
[2025-11-19 08:50:14] 2025-11-19 13:49:28,951 | INFO     | chi2: 8.934137233173447
[2025-11-19 08:50:14] 2025-11-19 13:49:28,952 | INFO     | current chi2=8.934137233173447 (change=28.170881328981796 %)
[2025-11-19 08:50:14] 2025-11-19 13:49:28,952 | INFO     | sum of square deviations: 36702311315.503075
[2025-11-19 08:50:14] 2025-11-19 13:49:28,962 | INFO     | sum of deviations: 346689117067.7438
[2025-11-19 08:50:14] 2025-11-19 13:49:28,962 | INFO     | mean x: 1763545157.1832993
[2025-11-19 08:50:14] 2025-11-19 13:49:28,962 | INFO     | mean y: 2839201.602851324
[2025-11-19 08:50:14] 2025-11-19 13:49:28,963 | INFO     | intersect: -16655564357.70424
[2025-11-19 08:50:14] 2025-11-19 13:49:28,963 | INFO     | chi2: 5.131983363983655
[2025-11-19 08:50:14] 2025-11-19 13:49:28,963 | INFO     | current chi2=5.131983363983655 (change=42.55759420251539 %)
[2025-11-19 08:50:14] 2025-11-19 13:49:28,964 | INFO     | sum of square deviations: 35592217419.31871
[2025-11-19 08:50:14] 2025-11-19 13:49:28,967 | INFO     | sum of deviations: 252082266485.74487
[2025-11-19 08:50:14] 2025-11-19 13:49:28,967 | INFO     | mean x: 1763545309.6934156
[2025-11-19 08:50:14] 2025-11-19 13:49:28,967 | INFO     | mean y: 2852166.0452674897
[2025-11-19 08:50:14] 2025-11-19 13:49:28,967 | INFO     | intersect: -12487476646.020374
[2025-11-19 08:50:14] 2025-11-19 13:49:28,993 | INFO     | chi2: 4.065406465045756
[2025-11-19 08:50:14] 2025-11-19 13:49:28,993 | INFO     | current chi2=4.065406465045756 (change=20.78293757581432 %)
[2025-11-19 08:50:14] 2025-11-19 13:49:28,993 | INFO     | left removable region: 40
[2025-11-19 08:50:14] 2025-11-19 13:49:28,993 | INFO     | sum of square deviations: 30179940570.1979
[2025-11-19 08:50:14] 2025-11-19 13:49:28,996 | INFO     | sum of deviations: 340303529515.07605
[2025-11-19 08:50:14] 2025-11-19 13:49:28,996 | INFO     | mean x: 1763545736.702174
[2025-11-19 08:50:14] 2025-11-19 13:49:29,004 | INFO     | mean y: 2894234.4239130435
[2025-11-19 08:50:14] 2025-11-19 13:49:29,004 | INFO     | intersect: -19882527251.58266
[2025-11-19 08:50:14] 2025-11-19 13:49:29,005 | INFO     | chi2: 0.24097457816418558
[2025-11-19 08:50:14] 2025-11-19 13:49:29,005 | INFO     | current memory leak: 11.28 B/s (using 460 data points, chi2=0.24)
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | could have reported an average CPU frequency of 3770 MHz (20 samples)
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | ..............................
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . Timing measurements:
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . get job = 1 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . initial setup = 9 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . payload setup = 137 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . stage-in = 0 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . payload execution = 30930 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . stage-out = 3 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | . log creation = 0 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,006 | INFO     | ..............................
[2025-11-19 08:50:14] 2025-11-19 13:49:29,145 | INFO     | 
[2025-11-19 08:50:14] 2025-11-19 13:49:29,146 | INFO     | job summary report
[2025-11-19 08:50:14] 2025-11-19 13:49:29,146 | INFO     | --------------------------------------------------
[2025-11-19 08:50:14] 2025-11-19 13:49:29,146 | INFO     | PanDA job id: 6891601180
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | task id: 47493068
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | errors: (none)
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | pilot state: finished 
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | transexitcode: 0
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | exeerrorcode: 0
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | exeerrordiag: 
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | exitcode: 0
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | exitmsg: OK
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | cpuconsumptiontime: 136271 s
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | nevents: 1000
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | neventsw: 0
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | pid: 2911434
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | pgrp: 2911434
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | corecount: 8
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | event service: False
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | sizes: {0: 2296321, 1: 2297178, 12: 2297178, 23: 2297206, 34: 2297234, 45: 2297262, 56: 2297418, 60: 2297708, 67: 2297736, 31068: 2336377, 31069: 2336376, 31073: 2
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | --------------------------------------------------
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | 
[2025-11-19 08:50:14] 2025-11-19 13:49:29,147 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-11-19 08:50:14] 2025-11-19 13:49:29,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 08:50:14] 2025-11-19 13:49:29,283 | INFO     | job 6891601180 has completed (purged errors)
[2025-11-19 08:50:14] 2025-11-19 13:49:29,284 | INFO     | overall cleanup function is called
[2025-11-19 08:50:14] 2025-11-19 13:49:30,309 | INFO     | --- collectZombieJob: --- 10, [2911434]
[2025-11-19 08:50:14] 2025-11-19 13:49:30,309 | INFO     | zombie collector waiting for pid 2911434
[2025-11-19 08:50:14] 2025-11-19 13:49:30,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 08:50:14] 2025-11-19 13:49:30,310 | INFO     | collected zombie processes
[2025-11-19 08:50:14] 2025-11-19 13:49:30,310 | INFO     | will attempt to kill all subprocesses of pid=2911434
[2025-11-19 08:50:14] 2025-11-19 13:49:31,331 | INFO     | process IDs to be killed: [2911434] (in reverse order)
[2025-11-19 08:50:14] 2025-11-19 13:49:31,551 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 08:50:14] 2025-11-19 13:49:31,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 08:50:14] 2025-11-19 13:49:31,580 | INFO     | did not find any defunct processes belonging to 2911434
[2025-11-19 08:50:14] 2025-11-19 13:49:31,607 | INFO     | did not find any defunct processes belonging to 2911434
[2025-11-19 08:50:14] 2025-11-19 13:49:31,609 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 08:50:14] 2025-11-19 13:49:31,609 | INFO     | ready for new job
[2025-11-19 08:50:14] 2025-11-19 13:49:31,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 08:50:14] 2025-11-19 13:49:31,612 | INFO     | ***************************************
[2025-11-19 08:50:14] 2025-11-19 13:49:31,613 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 08:50:14] 2025-11-19 13:49:31,613 | INFO     | ***************************************
[2025-11-19 08:50:14] 2025-11-19 13:49:31,613 | INFO     | 
[2025-11-19 08:50:14] 2025-11-19 13:49:31,617 | INFO     | architecture information:
[2025-11-19 08:50:14] 2025-11-19 13:49:31,626 | INFO     | executing command: cat /etc/os-release
[2025-11-19 08:50:14] 2025-11-19 13:49:31,645 | INFO     | cat /etc/os-release:
[2025-11-19 08:50:14] NAME="CentOS Linux"
[2025-11-19 08:50:14] VERSION="7 (Core)"
[2025-11-19 08:50:14] ID="centos"
[2025-11-19 08:50:14] ID_LIKE="rhel fedora"
[2025-11-19 08:50:14] VERSION_ID="7"
[2025-11-19 08:50:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 08:50:14] ANSI_COLOR="0;31"
[2025-11-19 08:50:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 08:50:14] HOME_URL="https://www.centos.org/"
[2025-11-19 08:50:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 08:50:14] 
[2025-11-19 08:50:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 08:50:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 08:50:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 08:50:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 08:50:14] 
[2025-11-19 08:50:14] 2025-11-19 13:49:31,645 | INFO     | ***************************************
[2025-11-19 08:50:14] 2025-11-19 13:49:32,148 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-11-19 08:50:14] 2025-11-19 13:49:32,189 | INFO     | sufficient remaining disk space (65831698432 B)
[2025-11-19 08:50:14] 2025-11-19 13:49:32,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 08:50:14] 2025-11-19 13:49:32,190 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 08:50:14] 2025-11-19 13:49:32,190 | INFO     | update_server=False
[2025-11-19 08:50:14] 2025-11-19 13:49:32,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 08:50:14] 2025-11-19 13:49:32,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 08:50:14] 2025-11-19 13:49:32,225 | INFO     | all payload control threads have been joined
[2025-11-19 08:50:14] 2025-11-19 13:49:32,295 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-19 08:50:14] 2025-11-19 13:49:32,296 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-19 08:50:14] 2025-11-19 13:49:32,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 08:50:14] 2025-11-19 13:49:32,296 | INFO     | will abort loop
[2025-11-19 08:50:14] 2025-11-19 13:49:32,478 | INFO     | all data control threads have been joined
[2025-11-19 08:50:14] 2025-11-19 13:49:33,195 | INFO     | [job] retrieve thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,246 | INFO     | [payload] control thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,301 | INFO     | [job] job monitor thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,419 | INFO     | [payload] validate_post thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,421 | INFO     | [job] validate thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,422 | INFO     | [payload] failed_post thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,451 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,502 | INFO     | [data] control thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,733 | INFO     | all job control threads have been joined
[2025-11-19 08:50:14] 2025-11-19 13:49:33,950 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:33,952 | INFO     | [data] copytool_in thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:34,120 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:34,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 08:50:14] 2025-11-19 13:49:34,196 | INFO     | [data] copytool_out thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:34,741 | INFO     | [job] control thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:35,160 | INFO     | [job] queue monitor thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:35,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 08:50:14] 2025-11-19 13:49:39,428 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:49:43,009 | INFO     | job.realtimelogging is not enabled
[2025-11-19 08:50:14] 2025-11-19 13:49:44,015 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 08:50:14] 2025-11-19 13:50:02,428 | INFO     | PID=2780617 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-19 08:50:14] 2025-11-19 13:50:02,428 | INFO     | .. there are 67 such processes running
[2025-11-19 08:50:14] 2025-11-19 13:50:02,428 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 08:50:14] 2025-11-19 13:50:02,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 08:50:14] 2025-11-19 13:50:02,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 08:50:14] 2025-11-19 13:50:07,181 | INFO     | [monitor] cgroup control has ended
[2025-11-19 08:50:14] 2025-11-19 13:50:08,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295005198144)>', '<ExcThread(monitor, started 140294267844352)>']
[2025-11-19 08:50:14] 2025-11-19 13:50:09,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 08:50:14] 2025-11-19 13:50:09,477 | INFO     | [monitor] control thread has ended
[2025-11-19 08:50:14] 2025-11-19 13:50:13,648 | INFO     | all workflow threads have been joined
[2025-11-19 08:50:14] 2025-11-19 13:50:13,648 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 08:50:14] 2025-11-19 13:50:13,649 | INFO     | traces error code: 0
[2025-11-19 08:50:14] 2025-11-19 13:50:13,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 08:50:14] 2025-11-19 13:50:14,434 [wrapper] ==== pilot stdout END ====
[2025-11-19 08:50:14] 2025-11-19 13:50:14,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 08:50:14] 2025-11-19 13:50:14,468 [wrapper] pilotpid: 2780617
[2025-11-19 08:50:14] 2025-11-19 13:50:14,479 [wrapper] Pilot exit status: 0
[2025-11-19 08:50:14] 2025-11-19 13:50:14,510 [wrapper] pandaids: 6891601180
[2025-11-19 08:50:14] 2025-11-19 13:50:14,647 [wrapper] cleanup supervisor_pilot 1712319 2780618
[2025-11-19 08:50:14] 2025-11-19 13:50:14,655 [wrapper] Test setup, not cleaning
[2025-11-19 08:50:14] 2025-11-19 13:50:14,659 [wrapper] apfmon messages muted
[2025-11-19 08:50:14] 2025-11-19 13:50:14,662 [wrapper] ==== wrapper stdout END ====
[2025-11-19 08:50:14] 2025-11-19 13:50:14,665 [wrapper] ==== wrapper stderr END ====
[2025-11-19 08:50:14]  *** Error codes and diagnostics ***
[2025-11-19 08:50:14]     "exeErrorCode": 0,
[2025-11-19 08:50:14]     "exeErrorDiag": "",
[2025-11-19 08:50:14]     "pilotErrorCode": 0,
[2025-11-19 08:50:14]     "pilotErrorDiag": "",
[2025-11-19 08:50:14]  *** Listing of results directory ***
[2025-11-19 08:50:14] total 1311540
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:50 pilot3.tar.gz
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 14:03 queuedata.json
[2025-11-19 08:50:14] -rwx------. 1 boincer umatlas     36292 Nov 18 14:04 runpilot2-wrapper.sh
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas       100 Nov 19 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 08:50:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 00:06 run_atlas
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas       105 Nov 19 00:06 job.xml
[2025-11-19 08:50:14] -rw-r--r--. 2 boincer umatlas 410294530 Nov 19 00:06 EVNT.47493065._000823.pool.root.1
[2025-11-19 08:50:14] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 00:06 start_atlas.sh
[2025-11-19 08:50:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 00:06 shared
[2025-11-19 08:50:14] -rw-r--r--. 2 boincer umatlas    590089 Nov 19 00:06 input.tar.gz
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas         0 Nov 19 00:06 boinc_lockfile
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas      2772 Nov 19 00:06 pandaJob.out
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas    992806 Nov 19 00:09 agis_schedconf.cvmfs.json
[2025-11-19 08:50:14] drwx------. 5 boincer umatlas      4096 Nov 19 00:09 pilot3
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas       533 Nov 19 08:40 boinc_task_state.xml
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas      7170 Nov 19 08:48 init_data.xml
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas 918084486 Nov 19 08:48 HITS.47493068._006872.pool.root.1
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas      1052 Nov 19 08:49 memory_monitor_summary.json
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas   1525063 Nov 19 08:49 agis_ddmendpoints.agis.ALL.json
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas   1740394 Nov 19 08:49 log.47493068._006872.job.log.tgz.1
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas        95 Nov 19 08:49 pilot_heartbeat.json
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas      8580 Nov 19 08:49 heartbeat.json
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 19 08:50 boinc_mmap_file
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas        29 Nov 19 08:50 wrapper_checkpoint.txt
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas      5083 Nov 19 08:50 pilotlog.txt
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas   3612711 Nov 19 08:50 log.47493068._006872.job.log.1
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas       353 Nov 19 08:50 output.list
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas       620 Nov 19 08:50 runtime_log
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas   5376000 Nov 19 08:50 result.tar.gz
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas      8713 Nov 19 08:50 runtime_log.err
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas       658 Nov 19 08:50 1GXKDmzAgf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeOGKDmv9eMMo.diag
[2025-11-19 08:50:14] -rw-r--r--. 1 boincer umatlas     21207 Nov 19 08:50 stderr.txt
[2025-11-19 08:50:14] HITS file was successfully produced:
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas 918084486 Nov 19 08:48 shared/HITS.pool.root.1
[2025-11-19 08:50:14]  *** Contents of shared directory: ***
[2025-11-19 08:50:14] total 1303104
[2025-11-19 08:50:14] -rw-r--r--. 2 boincer umatlas 410294530 Nov 19 00:06 ATLAS.root_0
[2025-11-19 08:50:14] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 00:06 start_atlas.sh
[2025-11-19 08:50:14] -rw-r--r--. 2 boincer umatlas    590089 Nov 19 00:06 input.tar.gz
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas 918084486 Nov 19 08:48 HITS.pool.root.1
[2025-11-19 08:50:14] -rw-------. 1 boincer umatlas   5376000 Nov 19 08:50 result.tar.gz
08:50:16 (2739378): run_atlas exited; CPU time 136647.815977
08:50:16 (2739378): called boinc_finish(0)

</stderr_txt>
]]>

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