Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:59 (1973752): wrapper (7.7.26015): starting
23:45:59 (1973752): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 23:45:59] Arguments: --nthreads 8
[2025-11-19 23:45:59] Threads: 8
[2025-11-19 23:45:59] Checking for CVMFS
[2025-11-19 23:46:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 23:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 23:46:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 23:46:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 23:46:02] 2.13.2.0 7533 22459 224564 153069 1 183 29736894 39288832 8204 16776704 0 11099452 99.625 12530506 35370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 23:46:02] CVMFS is ok
[2025-11-19 23:46:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 23:46:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 23:46:02] Further information can be found at the LHC@home message board.
[2025-11-19 23:46:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 23:46:02] Checking for apptainer binary...
[2025-11-19 23:46:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 23:46:02] Running /usr/bin/apptainer --version
[2025-11-19 23:46:02] apptainer version 1.4.4-1.el9
[2025-11-19 23:46:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 23:46:03] c-211-31.aglt2.org
[2025-11-19 23:46:03] apptainer works
[2025-11-19 23:46:03] Set ATHENA_PROC_NUMBER=8
[2025-11-19 23:46:03] Set ATHENA_CORE_NUMBER=8
[2025-11-19 23:46:03] Starting ATLAS job with PandaID=6891601961
[2025-11-19 23:46:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 08:51:09]  *** The last 200 lines of the pilot log: ***
[2025-11-21 08:51:09] 2025-11-21 13:50:19,727 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 08:51:09] 2025-11-21 13:50:19,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 08:51:09] 2025-11-21 13:50:19,777 | INFO     | fitting pss+swap vs Time
[2025-11-21 08:51:09] 2025-11-21 13:50:19,780 | INFO     | sum of square deviations: 2292125652352.552
[2025-11-21 08:51:09] 2025-11-21 13:50:19,885 | INFO     | sum of deviations: 8620784122044.09
[2025-11-21 08:51:09] 2025-11-21 13:50:19,886 | INFO     | mean x: 1763673614.9081109
[2025-11-21 08:51:09] 2025-11-21 13:50:19,886 | INFO     | mean y: 2968214.34137577
[2025-11-21 08:51:09] 2025-11-21 13:50:19,886 | INFO     | intersect: -6630284845.002415
[2025-11-21 08:51:09] 2025-11-21 13:50:19,888 | INFO     | chi2: 11.739754794681897
[2025-11-21 08:51:09] 2025-11-21 13:50:19,891 | INFO     | sum of square deviations: 2274521637942.613
[2025-11-21 08:51:09] 2025-11-21 13:50:19,996 | INFO     | sum of deviations: 9329179009526.627
[2025-11-21 08:51:09] 2025-11-21 13:50:19,996 | INFO     | mean x: 1763673462.4117343
[2025-11-21 08:51:09] 2025-11-21 13:50:19,996 | INFO     | mean y: 2974350.971693258
[2025-11-21 08:51:09] 2025-11-21 13:50:19,997 | INFO     | intersect: -7230909543.873818
[2025-11-21 08:51:09] 2025-11-21 13:50:19,999 | INFO     | chi2: 8.321856314507857
[2025-11-21 08:51:09] 2025-11-21 13:50:19,999 | INFO     | current chi2=8.321856314507857 (change=29.113883040575484 %)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,002 | INFO     | sum of square deviations: 2257007997320.125
[2025-11-21 08:51:09] 2025-11-21 13:50:20,106 | INFO     | sum of deviations: 9725637767706.28
[2025-11-21 08:51:09] 2025-11-21 13:50:20,107 | INFO     | mean x: 1763673309.9153767
[2025-11-21 08:51:09] 2025-11-21 13:50:20,107 | INFO     | mean y: 2977800.9834881322
[2025-11-21 08:51:09] 2025-11-21 13:50:20,107 | INFO     | intersect: -7596839201.514991
[2025-11-21 08:51:09] 2025-11-21 13:50:20,110 | INFO     | chi2: 6.893658922783334
[2025-11-21 08:51:09] 2025-11-21 13:50:20,110 | INFO     | current chi2=6.893658922783334 (change=17.162004939146616 %)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,110 | INFO     | right removable region: 1937
[2025-11-21 08:51:09] 2025-11-21 13:50:20,113 | INFO     | sum of square deviations: 2274519964712.6123
[2025-11-21 08:51:09] 2025-11-21 13:50:20,218 | INFO     | sum of deviations: 7863859188979.217
[2025-11-21 08:51:09] 2025-11-21 13:50:20,219 | INFO     | mean x: 1763673767.4117343
[2025-11-21 08:51:09] 2025-11-21 13:50:20,219 | INFO     | mean y: 2974769.7972207926
[2025-11-21 08:51:09] 2025-11-21 13:50:20,219 | INFO     | intersect: -6094699630.688755
[2025-11-21 08:51:09] 2025-11-21 13:50:20,222 | INFO     | chi2: 8.075601871298788
[2025-11-21 08:51:09] 2025-11-21 13:50:20,222 | INFO     | current chi2=8.075601871298788 (change=31.211494511307574 %)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,224 | INFO     | sum of square deviations: 2257004650860.126
[2025-11-21 08:51:09] 2025-11-21 13:50:20,329 | INFO     | sum of deviations: 7286099315259.75
[2025-11-21 08:51:09] 2025-11-21 13:50:20,329 | INFO     | mean x: 1763673919.9153767
[2025-11-21 08:51:09] 2025-11-21 13:50:20,329 | INFO     | mean y: 2979798.9984520124
[2025-11-21 08:51:09] 2025-11-21 13:50:20,329 | INFO     | intersect: -5690541184.815099
[2025-11-21 08:51:09] 2025-11-21 13:50:20,332 | INFO     | chi2: 6.031719636306135
[2025-11-21 08:51:09] 2025-11-21 13:50:20,332 | INFO     | current chi2=6.031719636306135 (change=25.309348672285882 %)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,334 | INFO     | sum of square deviations: 2239580660162.9023
[2025-11-21 08:51:09] 2025-11-21 13:50:20,438 | INFO     | sum of deviations: 7080318530087.1
[2025-11-21 08:51:09] 2025-11-21 13:50:20,439 | INFO     | mean x: 1763674072.4138644
[2025-11-21 08:51:09] 2025-11-21 13:50:20,439 | INFO     | mean y: 2981599.048629074
[2025-11-21 08:51:09] 2025-11-21 13:50:20,439 | INFO     | intersect: -5572782845.638867
[2025-11-21 08:51:09] 2025-11-21 13:50:20,441 | INFO     | chi2: 5.798352362203492
[2025-11-21 08:51:09] 2025-11-21 13:50:20,442 | INFO     | current chi2=5.798352362203492 (change=3.8690006859396866 %)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,442 | INFO     | left removable region: 30
[2025-11-21 08:51:09] 2025-11-21 13:50:20,444 | INFO     | sum of square deviations: 2150419985357.186
[2025-11-21 08:51:09] 2025-11-21 13:50:20,546 | INFO     | sum of deviations: 7821821600416.623
[2025-11-21 08:51:09] 2025-11-21 13:50:20,546 | INFO     | mean x: 1763674194.422129
[2025-11-21 08:51:09] 2025-11-21 13:50:20,546 | INFO     | mean y: 2995438.004195071
[2025-11-21 08:51:09] 2025-11-21 13:50:20,546 | INFO     | intersect: -6412097894.444077
[2025-11-21 08:51:09] 2025-11-21 13:50:20,549 | INFO     | chi2: 0.6810404977839029
[2025-11-21 08:51:09] 2025-11-21 13:50:20,549 | INFO     | current memory leak: 3.64 B/s (using 1907 data points, chi2=0.68)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,551 | INFO     | could have reported an average CPU frequency of 2899 MHz (68 samples)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,551 | INFO     | ..............................
[2025-11-21 08:51:09] 2025-11-21 13:50:20,551 | INFO     | . Timing measurements:
[2025-11-21 08:51:09] 2025-11-21 13:50:20,552 | INFO     | . get job = 0 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,552 | INFO     | . initial setup = 8 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,552 | INFO     | . payload setup = 58 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,552 | INFO     | . stage-in = 0 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,552 | INFO     | . payload execution = 118814 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,552 | INFO     | . stage-out = 4 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,552 | INFO     | . log creation = 1 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,553 | INFO     | ..............................
[2025-11-21 08:51:09] 2025-11-21 13:50:20,707 | INFO     | 
[2025-11-21 08:51:09] 2025-11-21 13:50:20,708 | INFO     | job summary report
[2025-11-21 08:51:09] 2025-11-21 13:50:20,708 | INFO     | --------------------------------------------------
[2025-11-21 08:51:09] 2025-11-21 13:50:20,708 | INFO     | PanDA job id: 6891601961
[2025-11-21 08:51:09] 2025-11-21 13:50:20,708 | INFO     | task id: 47493068
[2025-11-21 08:51:09] 2025-11-21 13:50:20,708 | INFO     | errors: (none)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 08:51:09] 2025-11-21 13:50:20,709 | INFO     | pilot state: finished 
[2025-11-21 08:51:09] 2025-11-21 13:50:20,709 | INFO     | transexitcode: 0
[2025-11-21 08:51:09] 2025-11-21 13:50:20,709 | INFO     | exeerrorcode: 0
[2025-11-21 08:51:09] 2025-11-21 13:50:20,709 | INFO     | exeerrordiag: 
[2025-11-21 08:51:09] 2025-11-21 13:50:20,709 | INFO     | exitcode: 0
[2025-11-21 08:51:09] 2025-11-21 13:50:20,710 | INFO     | exitmsg: OK
[2025-11-21 08:51:09] 2025-11-21 13:50:20,710 | INFO     | cpuconsumptiontime: 496789 s
[2025-11-21 08:51:09] 2025-11-21 13:50:20,710 | INFO     | nevents: 1000
[2025-11-21 08:51:09] 2025-11-21 13:50:20,710 | INFO     | neventsw: 0
[2025-11-21 08:51:09] 2025-11-21 13:50:20,710 | INFO     | pid: 1984882
[2025-11-21 08:51:09] 2025-11-21 13:50:20,710 | INFO     | pgrp: 1984882
[2025-11-21 08:51:09] 2025-11-21 13:50:20,711 | INFO     | corecount: 8
[2025-11-21 08:51:09] 2025-11-21 13:50:20,711 | INFO     | event service: False
[2025-11-21 08:51:09] 2025-11-21 13:50:20,711 | INFO     | sizes: {0: 2296371, 1: 2297056, 3: 2297255, 4: 2297255, 15: 2297283, 26: 2297311, 37: 2297467, 40: 2297757, 48: 2297785, 118874: 2380044, 118879: 2390970, 118888: 
[2025-11-21 08:51:09] 2025-11-21 13:50:20,711 | INFO     | --------------------------------------------------
[2025-11-21 08:51:09] 2025-11-21 13:50:20,711 | INFO     | 
[2025-11-21 08:51:09] 2025-11-21 13:50:20,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 08:51:09] 2025-11-21 13:50:20,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 08:51:09] 2025-11-21 13:50:20,743 | INFO     | job 6891601961 has completed (purged errors)
[2025-11-21 08:51:09] 2025-11-21 13:50:20,743 | INFO     | overall cleanup function is called
[2025-11-21 08:51:09] 2025-11-21 13:50:21,763 | INFO     | --- collectZombieJob: --- 10, [1984882]
[2025-11-21 08:51:09] 2025-11-21 13:50:21,763 | INFO     | zombie collector waiting for pid 1984882
[2025-11-21 08:51:09] 2025-11-21 13:50:21,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 08:51:09] 2025-11-21 13:50:21,767 | INFO     | collected zombie processes
[2025-11-21 08:51:09] 2025-11-21 13:50:21,767 | INFO     | will attempt to kill all subprocesses of pid=1984882
[2025-11-21 08:51:09] 2025-11-21 13:50:22,087 | INFO     | process IDs to be killed: [1984882] (in reverse order)
[2025-11-21 08:51:09] 2025-11-21 13:50:22,203 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 08:51:09] 2025-11-21 13:50:22,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 08:51:09] 2025-11-21 13:50:22,216 | INFO     | did not find any defunct processes belonging to 1984882
[2025-11-21 08:51:09] 2025-11-21 13:50:22,228 | INFO     | did not find any defunct processes belonging to 1984882
[2025-11-21 08:51:09] 2025-11-21 13:50:22,233 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 08:51:09] 2025-11-21 13:50:22,233 | INFO     | ready for new job
[2025-11-21 08:51:09] 2025-11-21 13:50:22,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 08:51:09] 2025-11-21 13:50:22,249 | INFO     | ***************************************
[2025-11-21 08:51:09] 2025-11-21 13:50:22,249 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 08:51:09] 2025-11-21 13:50:22,249 | INFO     | ***************************************
[2025-11-21 08:51:09] 2025-11-21 13:50:22,249 | INFO     | 
[2025-11-21 08:51:09] 2025-11-21 13:50:22,251 | INFO     | architecture information:
[2025-11-21 08:51:09] 2025-11-21 13:50:22,252 | INFO     | executing command: cat /etc/os-release
[2025-11-21 08:51:09] 2025-11-21 13:50:22,276 | INFO     | cat /etc/os-release:
[2025-11-21 08:51:09] NAME="CentOS Linux"
[2025-11-21 08:51:09] VERSION="7 (Core)"
[2025-11-21 08:51:09] ID="centos"
[2025-11-21 08:51:09] ID_LIKE="rhel fedora"
[2025-11-21 08:51:09] VERSION_ID="7"
[2025-11-21 08:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 08:51:09] ANSI_COLOR="0;31"
[2025-11-21 08:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 08:51:09] HOME_URL="https://www.centos.org/"
[2025-11-21 08:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 08:51:09] 
[2025-11-21 08:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 08:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 08:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 08:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 08:51:09] 
[2025-11-21 08:51:09] 2025-11-21 13:50:22,276 | INFO     | ***************************************
[2025-11-21 08:51:09] 2025-11-21 13:50:22,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 08:51:09] 2025-11-21 13:50:22,807 | INFO     | sufficient remaining disk space (47348449280 B)
[2025-11-21 08:51:09] 2025-11-21 13:50:22,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 08:51:09] 2025-11-21 13:50:22,807 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 08:51:09] 2025-11-21 13:50:22,807 | INFO     | update_server=False
[2025-11-21 08:51:09] 2025-11-21 13:50:22,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 08:51:09] 2025-11-21 13:50:22,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:51:09] 2025-11-21 13:50:22,808 | INFO     | aborting loop
[2025-11-21 08:51:09] 2025-11-21 13:50:22,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 08:51:09] 2025-11-21 13:50:23,371 | INFO     | all payload control threads have been joined
[2025-11-21 08:51:09] 2025-11-21 13:50:23,523 | INFO     | all data control threads have been joined
[2025-11-21 08:51:09] 2025-11-21 13:50:23,813 | INFO     | [job] retrieve thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:23,814 | INFO     | [job] job monitor thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:23,835 | INFO     | [payload] validate_post thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:23,980 | INFO     | all job control threads have been joined
[2025-11-21 08:51:09] 2025-11-21 13:50:24,202 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:24,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 08:51:09] 2025-11-21 13:50:24,376 | INFO     | [payload] control thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:24,488 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:24,529 | INFO     | [data] control thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:24,985 | INFO     | [job] control thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:25,027 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:25,029 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:25,058 | INFO     | [job] validate thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:25,183 | INFO     | [data] copytool_in thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:25,375 | INFO     | [payload] failed_post thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:25,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:51:09] 2025-11-21 13:50:26,298 | INFO     | [data] copytool_out thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:26,728 | INFO     | [job] queue monitor thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:26,815 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 08:51:09] 2025-11-21 13:50:53,088 | INFO     | PID=1977584 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 08:51:09] 2025-11-21 13:50:53,088 | INFO     | .. there are 7 such processes running
[2025-11-21 08:51:09] 2025-11-21 13:50:53,089 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 08:51:09] 2025-11-21 13:50:53,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 08:51:09] 2025-11-21 13:50:53,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 08:51:09] 2025-11-21 13:51:02,739 | INFO     | [monitor] cgroup control has ended
[2025-11-21 08:51:09] 2025-11-21 13:51:04,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055866611520)>', '<ExcThread(monitor, started 140055209285376)>']
[2025-11-21 08:51:09] 2025-11-21 13:51:04,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 08:51:09] 2025-11-21 13:51:04,151 | INFO     | [monitor] control thread has ended
[2025-11-21 08:51:09] 2025-11-21 13:51:09,070 | INFO     | all workflow threads have been joined
[2025-11-21 08:51:09] 2025-11-21 13:51:09,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 08:51:09] 2025-11-21 13:51:09,070 | INFO     | traces error code: 0
[2025-11-21 08:51:09] 2025-11-21 13:51:09,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 08:51:09] 2025-11-21 13:51:09,214 [wrapper] ==== pilot stdout END ====
[2025-11-21 08:51:09] 2025-11-21 13:51:09,223 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 08:51:09] 2025-11-21 13:51:09,227 [wrapper] pilotpid: 1977584
[2025-11-21 08:51:09] 2025-11-21 13:51:09,232 [wrapper] Pilot exit status: 0
[2025-11-21 08:51:09] 2025-11-21 13:51:09,274 [wrapper] pandaids: 6891601961
[2025-11-21 08:51:09] 2025-11-21 13:51:09,352 [wrapper] cleanup supervisor_pilot  360899 1977585
[2025-11-21 08:51:09] 2025-11-21 13:51:09,356 [wrapper] Test setup, not cleaning
[2025-11-21 08:51:09] 2025-11-21 13:51:09,366 [wrapper] apfmon messages muted
[2025-11-21 08:51:09] 2025-11-21 13:51:09,373 [wrapper] ==== wrapper stdout END ====
[2025-11-21 08:51:09] 2025-11-21 13:51:09,380 [wrapper] ==== wrapper stderr END ====
[2025-11-21 08:51:09]  *** Error codes and diagnostics ***
[2025-11-21 08:51:09]     "exeErrorCode": 0,
[2025-11-21 08:51:09]     "exeErrorDiag": "",
[2025-11-21 08:51:09]     "pilotErrorCode": 0,
[2025-11-21 08:51:09]     "pilotErrorDiag": "",
[2025-11-21 08:51:09]  *** Listing of results directory ***
[2025-11-21 08:51:09] total 1333860
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:50 pilot3.tar.gz
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 14:18 queuedata.json
[2025-11-21 08:51:09] -rwx------. 1 boincer umatlas     36292 Nov 18 14:19 runpilot2-wrapper.sh
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas       100 Nov 19 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 08:51:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 23:45 run_atlas
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas       105 Nov 19 23:45 job.xml
[2025-11-21 08:51:09] -rw-r--r--. 2 boincer umatlas 409823344 Nov 19 23:45 EVNT.47493065._000904.pool.root.1
[2025-11-21 08:51:09] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 23:45 start_atlas.sh
[2025-11-21 08:51:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 23:45 shared
[2025-11-21 08:51:09] -rw-r--r--. 2 boincer umatlas    590092 Nov 19 23:45 input.tar.gz
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas         0 Nov 19 23:45 boinc_lockfile
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas      2772 Nov 19 23:46 pandaJob.out
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas    989427 Nov 19 23:47 agis_schedconf.cvmfs.json
[2025-11-21 08:51:09] drwx------. 5 boincer umatlas      4096 Nov 19 23:47 pilot3
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas       534 Nov 21 08:36 boinc_task_state.xml
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas      6528 Nov 21 08:45 init_data.xml
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas 914815835 Nov 21 08:49 HITS.47493068._007190.pool.root.1
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas        95 Nov 21 08:49 pilot_heartbeat.json
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas      1054 Nov 21 08:50 memory_monitor_summary.json
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas   1526164 Nov 21 08:50 agis_ddmendpoints.agis.ALL.json
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas   2895468 Nov 21 08:50 log.47493068._007190.job.log.tgz.1
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas      8633 Nov 21 08:50 heartbeat.json
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 08:51 boinc_mmap_file
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas        30 Nov 21 08:51 wrapper_checkpoint.txt
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas      4824 Nov 21 08:51 pilotlog.txt
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas  15758921 Nov 21 08:51 log.47493068._007190.job.log.1
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas       353 Nov 21 08:51 output.list
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas       620 Nov 21 08:51 runtime_log
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas  18677760 Nov 21 08:51 result.tar.gz
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas      8705 Nov 21 08:51 runtime_log.err
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas       663 Nov 21 08:51 PpyKDmcPgf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoRGKDmops0Um.diag
[2025-11-21 08:51:09] -rw-r--r--. 1 boincer umatlas     21161 Nov 21 08:51 stderr.txt
[2025-11-21 08:51:09] HITS file was successfully produced:
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas 914815835 Nov 21 08:49 shared/HITS.pool.root.1
[2025-11-21 08:51:09]  *** Contents of shared directory: ***
[2025-11-21 08:51:09] total 1312440
[2025-11-21 08:51:09] -rw-r--r--. 2 boincer umatlas 409823344 Nov 19 23:45 ATLAS.root_0
[2025-11-21 08:51:09] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 23:45 start_atlas.sh
[2025-11-21 08:51:09] -rw-r--r--. 2 boincer umatlas    590092 Nov 19 23:45 input.tar.gz
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas 914815835 Nov 21 08:49 HITS.pool.root.1
[2025-11-21 08:51:09] -rw-------. 1 boincer umatlas  18677760 Nov 21 08:51 result.tar.gz
08:51:11 (1973752): run_atlas exited; CPU time 499724.677042
08:51:11 (1973752): called boinc_finish(0)

</stderr_txt>
]]>

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