Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:23:01 (3908383): wrapper (7.7.26015): starting
19:23:01 (3908383): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 19:23:01] Arguments: --nthreads 8
[2025-11-19 19:23:01] Threads: 8
[2025-11-19 19:23:01] Checking for CVMFS
[2025-11-19 19:23:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 19:23:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 19:23:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 19:23:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 19:23:03] 2.13.3.0 9239 20638 331068 153062 0 297 27837918 32935936 15456 16776704 0 75322559 99.467 96430946 38410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 19:23:03] CVMFS is ok
[2025-11-19 19:23:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 19:23:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 19:23:03] Further information can be found at the LHC@home message board.
[2025-11-19 19:23:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 19:23:03] Checking for apptainer binary...
[2025-11-19 19:23:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 19:23:03] Running /usr/bin/apptainer --version
[2025-11-19 19:23:04] apptainer version 1.4.4-1.el9
[2025-11-19 19:23:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 19:23:04] c6-6-39-3.aglt2.org
[2025-11-19 19:23:04] apptainer works
[2025-11-19 19:23:04] Set ATHENA_PROC_NUMBER=8
[2025-11-19 19:23:04] Set ATHENA_CORE_NUMBER=8
[2025-11-19 19:23:04] Starting ATLAS job with PandaID=6891565347
[2025-11-19 19:23:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 20:28:00]  *** The last 200 lines of the pilot log: ***
[2025-11-20 20:28:00] 2025-11-21 01:27:26,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 20:28:00] 2025-11-21 01:27:26,736 | INFO     | fitting pss+swap vs Time
[2025-11-20 20:28:00] 2025-11-21 01:27:26,738 | INFO     | sum of square deviations: 999111428982.35
[2025-11-20 20:28:00] 2025-11-21 01:27:26,778 | INFO     | sum of deviations: 4861197451042.383
[2025-11-20 20:28:00] 2025-11-21 01:27:26,778 | INFO     | mean x: 1763643382.8361545
[2025-11-20 20:28:00] 2025-11-21 01:27:26,778 | INFO     | mean y: 2918297.5057549085
[2025-11-20 20:28:00] 2025-11-21 01:27:26,778 | INFO     | intersect: -8578125286.3149
[2025-11-20 20:28:00] 2025-11-21 01:27:26,780 | INFO     | chi2: 11.766008410761135
[2025-11-20 20:28:00] 2025-11-21 01:27:26,782 | INFO     | sum of square deviations: 989000182096.9952
[2025-11-20 20:28:00] 2025-11-21 01:27:26,820 | INFO     | sum of deviations: 5368689878326.686
[2025-11-20 20:28:00] 2025-11-21 01:27:26,820 | INFO     | mean x: 1763643230.345788
[2025-11-20 20:28:00] 2025-11-21 01:27:26,821 | INFO     | mean y: 2925950.4171195654
[2025-11-20 20:28:00] 2025-11-21 01:27:26,821 | INFO     | intersect: -9570837261.29501
[2025-11-20 20:28:00] 2025-11-21 01:27:26,822 | INFO     | chi2: 8.529052026989035
[2025-11-20 20:28:00] 2025-11-21 01:27:26,823 | INFO     | current chi2=8.529052026989035 (change=27.5110833748138 %)
[2025-11-20 20:28:00] 2025-11-21 01:27:26,824 | INFO     | sum of square deviations: 978957401611.3645
[2025-11-20 20:28:00] 2025-11-21 01:27:26,863 | INFO     | sum of deviations: 5882378237683.238
[2025-11-20 20:28:00] 2025-11-21 01:27:26,863 | INFO     | mean x: 1763643077.8554873
[2025-11-20 20:28:00] 2025-11-21 01:27:26,863 | INFO     | mean y: 2933747.4492160873
[2025-11-20 20:28:00] 2025-11-21 01:27:26,863 | INFO     | intersect: -10594479013.454893
[2025-11-20 20:28:00] 2025-11-21 01:27:26,865 | INFO     | chi2: 5.148496319164098
[2025-11-20 20:28:00] 2025-11-21 01:27:26,865 | INFO     | current chi2=5.148496319164098 (change=39.635773086242466 %)
[2025-11-20 20:28:00] 2025-11-21 01:27:26,867 | INFO     | sum of square deviations: 968982765602.6847
[2025-11-20 20:28:00] 2025-11-21 01:27:26,905 | INFO     | sum of deviations: 6022347862107.147
[2025-11-20 20:28:00] 2025-11-21 01:27:26,905 | INFO     | mean x: 1763642925.3645692
[2025-11-20 20:28:00] 2025-11-21 01:27:26,905 | INFO     | mean y: 2935885.091655267
[2025-11-20 20:28:00] 2025-11-21 01:27:26,905 | INFO     | intersect: -10958323260.197193
[2025-11-20 20:28:00] 2025-11-21 01:27:26,907 | INFO     | chi2: 4.7098486930914305
[2025-11-20 20:28:00] 2025-11-21 01:27:26,907 | INFO     | current chi2=4.7098486930914305 (change=8.51991725117685 %)
[2025-11-20 20:28:00] 2025-11-21 01:27:26,907 | INFO     | right removable region: 1461
[2025-11-20 20:28:00] 2025-11-21 01:27:26,909 | INFO     | sum of square deviations: 988997626806.9944
[2025-11-20 20:28:00] 2025-11-21 01:27:26,947 | INFO     | sum of deviations: 4279549239196.1216
[2025-11-20 20:28:00] 2025-11-21 01:27:26,947 | INFO     | mean x: 1763643535.345788
[2025-11-20 20:28:00] 2025-11-21 01:27:26,947 | INFO     | mean y: 2927067.0842391304
[2025-11-20 20:28:00] 2025-11-21 01:27:26,947 | INFO     | intersect: -7628637605.391118
[2025-11-20 20:28:00] 2025-11-21 01:27:26,949 | INFO     | chi2: 7.930092502406815
[2025-11-20 20:28:00] 2025-11-21 01:27:26,949 | INFO     | current chi2=7.930092502406815 (change=32.60167572926439 %)
[2025-11-20 20:28:00] 2025-11-21 01:27:26,951 | INFO     | sum of square deviations: 978952739522.9015
[2025-11-20 20:28:00] 2025-11-21 01:27:27,005 | INFO     | sum of deviations: 4062419974132.685
[2025-11-20 20:28:00] 2025-11-21 01:27:27,005 | INFO     | mean x: 1763643687.8520792
[2025-11-20 20:28:00] 2025-11-21 01:27:27,005 | INFO     | mean y: 2930360.187457396
[2025-11-20 20:28:00] 2025-11-21 01:27:27,006 | INFO     | intersect: -7315769568.345412
[2025-11-20 20:28:00] 2025-11-21 01:27:27,007 | INFO     | chi2: 7.325703492253421
[2025-11-20 20:28:00] 2025-11-21 01:27:27,007 | INFO     | current chi2=7.325703492253421 (change=7.621462296561604 %)
[2025-11-20 20:28:00] 2025-11-21 01:27:27,008 | INFO     | left removable region: 20
[2025-11-20 20:28:00] 2025-11-21 01:27:27,013 | INFO     | sum of square deviations: 927820913358.3286
[2025-11-20 20:28:00] 2025-11-21 01:27:27,070 | INFO     | sum of deviations: 5080332160512.331
[2025-11-20 20:28:00] 2025-11-21 01:27:27,071 | INFO     | mean x: 1763643504.8924358
[2025-11-20 20:28:00] 2025-11-21 01:27:27,071 | INFO     | mean y: 2950731.0666204025
[2025-11-20 20:28:00] 2025-11-21 01:27:27,071 | INFO     | intersect: -9653971945.04833
[2025-11-20 20:28:00] 2025-11-21 01:27:27,073 | INFO     | chi2: 0.16025545426638832
[2025-11-20 20:28:00] 2025-11-21 01:27:27,073 | INFO     | current memory leak: 5.48 B/s (using 1441 data points, chi2=0.16)
[2025-11-20 20:28:00] 2025-11-21 01:27:27,074 | INFO     | could have reported an average CPU frequency of 2866 MHz (53 samples)
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | ..............................
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . Timing measurements:
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . get job = 0 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . initial setup = 5 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . payload setup = 32 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . stage-in = 0 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . payload execution = 90069 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . stage-out = 7 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | . log creation = 2 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,075 | INFO     | ..............................
[2025-11-20 20:28:00] 2025-11-21 01:27:27,368 | INFO     | 
[2025-11-20 20:28:00] 2025-11-21 01:27:27,369 | INFO     | job summary report
[2025-11-20 20:28:00] 2025-11-21 01:27:27,369 | INFO     | --------------------------------------------------
[2025-11-20 20:28:00] 2025-11-21 01:27:27,369 | INFO     | PanDA job id: 6891565347
[2025-11-20 20:28:00] 2025-11-21 01:27:27,369 | INFO     | task id: 47493068
[2025-11-20 20:28:00] 2025-11-21 01:27:27,369 | INFO     | errors: (none)
[2025-11-20 20:28:00] 2025-11-21 01:27:27,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | pilot state: finished 
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | transexitcode: 0
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | exeerrorcode: 0
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | exeerrordiag: 
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | exitcode: 0
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | exitmsg: OK
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | cpuconsumptiontime: 255848 s
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | nevents: 1000
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | neventsw: 0
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | pid: 3921595
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | pgrp: 3921595
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | corecount: 8
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | event service: False
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | sizes: {0: 2297023, 1: 2297222, 12: 2297222, 23: 2297250, 30: 2297540, 33: 2297568, 90102: 2363545, 90103: 2363544, 90111: 2374190, 90114: 2374246, 90143: 2374588}
[2025-11-20 20:28:00] 2025-11-21 01:27:27,370 | INFO     | --------------------------------------------------
[2025-11-20 20:28:00] 2025-11-21 01:27:27,371 | INFO     | 
[2025-11-20 20:28:00] 2025-11-21 01:27:27,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-20 20:28:00] 2025-11-21 01:27:27,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 20:28:00] 2025-11-21 01:27:27,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 20:28:00] 2025-11-21 01:27:27,454 | INFO     | job 6891565347 has completed (purged errors)
[2025-11-20 20:28:00] 2025-11-21 01:27:27,454 | INFO     | overall cleanup function is called
[2025-11-20 20:28:00] 2025-11-21 01:27:28,481 | INFO     | --- collectZombieJob: --- 10, [3921595]
[2025-11-20 20:28:00] 2025-11-21 01:27:28,481 | INFO     | zombie collector waiting for pid 3921595
[2025-11-20 20:28:00] 2025-11-21 01:27:28,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 20:28:00] 2025-11-21 01:27:28,482 | INFO     | collected zombie processes
[2025-11-20 20:28:00] 2025-11-21 01:27:28,482 | INFO     | will attempt to kill all subprocesses of pid=3921595
[2025-11-20 20:28:00] 2025-11-21 01:27:29,348 | INFO     | process IDs to be killed: [3921595] (in reverse order)
[2025-11-20 20:28:00] 2025-11-21 01:27:29,575 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 20:28:00] 2025-11-21 01:27:29,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 20:28:00] 2025-11-21 01:27:29,601 | INFO     | did not find any defunct processes belonging to 3921595
[2025-11-20 20:28:00] 2025-11-21 01:27:29,626 | INFO     | did not find any defunct processes belonging to 3921595
[2025-11-20 20:28:00] 2025-11-21 01:27:29,632 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 20:28:00] 2025-11-21 01:27:29,632 | INFO     | ready for new job
[2025-11-20 20:28:00] 2025-11-21 01:27:29,632 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 20:28:00] 2025-11-21 01:27:29,647 | INFO     | ***************************************
[2025-11-20 20:28:00] 2025-11-21 01:27:29,647 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 20:28:00] 2025-11-21 01:27:29,647 | INFO     | ***************************************
[2025-11-20 20:28:00] 2025-11-21 01:27:29,647 | INFO     | 
[2025-11-20 20:28:00] 2025-11-21 01:27:29,654 | INFO     | architecture information:
[2025-11-20 20:28:00] 2025-11-21 01:27:29,662 | INFO     | executing command: cat /etc/os-release
[2025-11-20 20:28:00] 2025-11-21 01:27:29,708 | INFO     | cat /etc/os-release:
[2025-11-20 20:28:00] NAME="CentOS Linux"
[2025-11-20 20:28:00] VERSION="7 (Core)"
[2025-11-20 20:28:00] ID="centos"
[2025-11-20 20:28:00] ID_LIKE="rhel fedora"
[2025-11-20 20:28:00] VERSION_ID="7"
[2025-11-20 20:28:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 20:28:00] ANSI_COLOR="0;31"
[2025-11-20 20:28:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 20:28:00] HOME_URL="https://www.centos.org/"
[2025-11-20 20:28:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 20:28:00] 
[2025-11-20 20:28:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 20:28:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 20:28:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 20:28:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 20:28:00] 
[2025-11-20 20:28:00] 2025-11-21 01:27:29,708 | INFO     | ***************************************
[2025-11-20 20:28:00] 2025-11-21 01:27:30,211 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-20 20:28:00] 2025-11-21 01:27:30,284 | INFO     | sufficient remaining disk space (70718062592 B)
[2025-11-20 20:28:00] 2025-11-21 01:27:30,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 20:28:00] 2025-11-21 01:27:30,284 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 20:28:00] 2025-11-21 01:27:30,284 | INFO     | update_server=False
[2025-11-20 20:28:00] 2025-11-21 01:27:30,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 20:28:00] 2025-11-21 01:27:30,445 | INFO     | all data control threads have been joined
[2025-11-20 20:28:00] 2025-11-21 01:27:30,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 20:28:00] 2025-11-21 01:27:30,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:28:00] 2025-11-21 01:27:30,640 | INFO     | aborting loop
[2025-11-20 20:28:00] 2025-11-21 01:27:30,758 | INFO     | all job control threads have been joined
[2025-11-20 20:28:00] 2025-11-21 01:27:30,861 | INFO     | all payload control threads have been joined
[2025-11-20 20:28:00] 2025-11-21 01:27:31,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 20:28:00] 2025-11-21 01:27:31,290 | INFO     | [job] retrieve thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:31,412 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:31,443 | INFO     | [payload] validate_post thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:31,451 | INFO     | [data] control thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:31,649 | INFO     | [job] job monitor thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:31,764 | INFO     | [job] control thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:31,867 | INFO     | [payload] control thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:32,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:28:00] 2025-11-21 01:27:32,457 | INFO     | [data] copytool_out thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:32,523 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:32,536 | INFO     | [data] copytool_in thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:32,599 | INFO     | [payload] failed_post thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:32,626 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:32,784 | INFO     | [job] validate thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:33,391 | INFO     | [job] queue monitor thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:35,183 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:40,356 | INFO     | job.realtimelogging is not enabled
[2025-11-20 20:28:00] 2025-11-21 01:27:41,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 20:28:00] 2025-11-21 01:27:50,901 | INFO     | [monitor] cgroup control has ended
[2025-11-20 20:28:00] 2025-11-21 01:27:52,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723882022720)>', '<ExcThread(monitor, started 139723246913280)>']
[2025-11-20 20:28:00] 2025-11-21 01:27:57,944 | INFO     | all workflow threads have been joined
[2025-11-20 20:28:00] 2025-11-21 01:27:57,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 20:28:00] 2025-11-21 01:27:57,945 | INFO     | traces error code: 0
[2025-11-20 20:28:00] 2025-11-21 01:27:57,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 20:28:00] 2025-11-21 01:27:59,962 | INFO     | PID=3912607 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 20:28:00] 2025-11-21 01:27:59,962 | INFO     | .. there are 31 such processes running
[2025-11-20 20:28:00] 2025-11-21 01:27:59,963 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 20:28:00] 2025-11-21 01:27:59,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 20:28:00] 2025-11-21 01:27:59,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 20:28:00] 2025-11-21 01:27:59,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 20:28:00] 2025-11-21 01:27:59,963 | INFO     | [monitor] control thread has ended
[2025-11-20 20:28:00] 2025-11-21 01:28:00,127 [wrapper] ==== pilot stdout END ====
[2025-11-20 20:28:00] 2025-11-21 01:28:00,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 20:28:00] 2025-11-21 01:28:00,132 [wrapper] pilotpid: 3912607
[2025-11-20 20:28:00] 2025-11-21 01:28:00,135 [wrapper] Pilot exit status: 0
[2025-11-20 20:28:00] 2025-11-21 01:28:00,173 [wrapper] pandaids: 6891565347
[2025-11-20 20:28:00] 2025-11-21 01:28:00,272 [wrapper] cleanup supervisor_pilot  282148 3912608
[2025-11-20 20:28:00] 2025-11-21 01:28:00,288 [wrapper] Test setup, not cleaning
[2025-11-20 20:28:00] 2025-11-21 01:28:00,306 [wrapper] apfmon messages muted
[2025-11-20 20:28:00] 2025-11-21 01:28:00,326 [wrapper] ==== wrapper stdout END ====
[2025-11-20 20:28:00] 2025-11-21 01:28:00,359 [wrapper] ==== wrapper stderr END ====
[2025-11-20 20:28:00]  *** Error codes and diagnostics ***
[2025-11-20 20:28:00]     "exeErrorCode": 0,
[2025-11-20 20:28:00]     "exeErrorDiag": "",
[2025-11-20 20:28:00]     "pilotErrorCode": 0,
[2025-11-20 20:28:00]     "pilotErrorDiag": "",
[2025-11-20 20:28:00]  *** Listing of results directory ***
[2025-11-20 20:28:00] total 1322676
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:27 queuedata.json
[2025-11-20 20:28:00] -rwx------. 1 boincer umatlas     36292 Nov 18 10:27 runpilot2-wrapper.sh
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas       100 Nov 19 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 20:28:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 19:23 run_atlas
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas       105 Nov 19 19:23 job.xml
[2025-11-20 20:28:00] -rw-r--r--. 2 boincer umatlas 408590684 Nov 19 19:23 EVNT.47493065._000146.pool.root.1
[2025-11-20 20:28:00] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 19:23 start_atlas.sh
[2025-11-20 20:28:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 19:23 shared
[2025-11-20 20:28:00] -rw-r--r--. 2 boincer umatlas    590103 Nov 19 19:23 input.tar.gz
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas         0 Nov 19 19:23 boinc_lockfile
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas      2770 Nov 19 19:23 pandaJob.out
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas    989451 Nov 19 19:24 agis_schedconf.cvmfs.json
[2025-11-20 20:28:00] drwx------. 5 boincer umatlas      4096 Nov 19 19:24 pilot3
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas       533 Nov 20 20:10 boinc_task_state.xml
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas      6841 Nov 20 20:20 init_data.xml
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas 914368085 Nov 20 20:25 HITS.47493068._001451.pool.root.1
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas      1058 Nov 20 20:26 memory_monitor_summary.json
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas   1526164 Nov 20 20:26 agis_ddmendpoints.agis.ALL.json
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas   2481158 Nov 20 20:26 log.47493068._001451.job.log.tgz.1
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas        95 Nov 20 20:27 pilot_heartbeat.json
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas      8613 Nov 20 20:27 heartbeat.json
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas       823 Nov 20 20:27 pilotlog.txt
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 20:28 boinc_mmap_file
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas  11289024 Nov 20 20:28 log.47493068._001451.job.log.1
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas        29 Nov 20 20:28 wrapper_checkpoint.txt
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas       353 Nov 20 20:28 output.list
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas       620 Nov 20 20:28 runtime_log
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas  13793280 Nov 20 20:28 result.tar.gz
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas      8709 Nov 20 20:28 runtime_log.err
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas       661 Nov 20 20:28 cwmNDmYncf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyDFKDmO8dPxn.diag
[2025-11-20 20:28:00] -rw-r--r--. 1 boincer umatlas     21148 Nov 20 20:28 stderr.txt
[2025-11-20 20:28:00] HITS file was successfully produced:
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas 914368085 Nov 20 20:25 shared/HITS.pool.root.1
[2025-11-20 20:28:00]  *** Contents of shared directory: ***
[2025-11-20 20:28:00] total 1306028
[2025-11-20 20:28:00] -rw-r--r--. 2 boincer umatlas 408590684 Nov 19 19:23 ATLAS.root_0
[2025-11-20 20:28:00] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 19:23 start_atlas.sh
[2025-11-20 20:28:00] -rw-r--r--. 2 boincer umatlas    590103 Nov 19 19:23 input.tar.gz
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas 914368085 Nov 20 20:25 HITS.pool.root.1
[2025-11-20 20:28:00] -rw-------. 1 boincer umatlas  13793280 Nov 20 20:28 result.tar.gz
20:28:02 (3908383): run_atlas exited; CPU time 257783.463657
20:28:02 (3908383): called boinc_finish(0)

</stderr_txt>
]]>

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