Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:41:02 (2291596): wrapper (7.7.26015): starting
21:41:02 (2291596): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:41:02] Arguments: --nthreads 8
[2025-11-20 21:41:02] Threads: 8
[2025-11-20 21:41:02] Checking for CVMFS
[2025-11-20 21:41:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:41:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:41:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:41:04] 2.13.2.0 5745 25943 176488 153104 3 133 37652090 39288833 6353 16776704 0 13030238 99.521 10959969 30499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 21:41:04] CVMFS is ok
[2025-11-20 21:41:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 21:41:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 21:41:04] Further information can be found at the LHC@home message board.
[2025-11-20 21:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:41:04] Checking for apptainer binary...
[2025-11-20 21:41:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:41:04] Running /usr/bin/apptainer --version
[2025-11-20 21:41:06] apptainer version 1.4.4-1.el9
[2025-11-20 21:41:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:41:06] c-211-4.aglt2.org
[2025-11-20 21:41:06] apptainer works
[2025-11-20 21:41:06] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:41:06] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:41:06] Starting ATLAS job with PandaID=6891601300
[2025-11-20 21:41:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 11:56:46]  *** The last 200 lines of the pilot log: ***
[2025-11-21 11:56:46] 2025-11-21 16:56:12,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 11:56:46] 2025-11-21 16:56:12,514 | INFO     | time since job start (51247s) is within the limit (172800.0s)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,614 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 11:56:46] 2025-11-21 16:56:13,620 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1532250000005
[2025-11-21 11:56:46] 2025-11-21 16:56:13,627 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891601300/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,627 | INFO     | extracted standard info from prmon json
[2025-11-21 11:56:46] 2025-11-21 16:56:13,628 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 11:56:46] 2025-11-21 16:56:13,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 11:56:46] 2025-11-21 16:56:13,644 | INFO     | fitting pss+swap vs Time
[2025-11-21 11:56:46] 2025-11-21 16:56:13,645 | INFO     | sum of square deviations: 183063525696.21695
[2025-11-21 11:56:46] 2025-11-21 16:56:13,663 | INFO     | sum of deviations: 1637269130911.5132
[2025-11-21 11:56:46] 2025-11-21 16:56:13,664 | INFO     | mean x: 1763718554.5947556
[2025-11-21 11:56:46] 2025-11-21 16:56:13,664 | INFO     | mean y: 2879901.2073897496
[2025-11-21 11:56:46] 2025-11-21 16:56:13,664 | INFO     | intersect: -15771327080.066437
[2025-11-21 11:56:46] 2025-11-21 16:56:13,665 | INFO     | chi2: 6.688071997897065
[2025-11-21 11:56:46] 2025-11-21 16:56:13,666 | INFO     | sum of square deviations: 179809551879.85144
[2025-11-21 11:56:46] 2025-11-21 16:56:13,684 | INFO     | sum of deviations: 1935673654682.9448
[2025-11-21 11:56:46] 2025-11-21 16:56:13,684 | INFO     | mean x: 1763718402.1103117
[2025-11-21 11:56:46] 2025-11-21 16:56:13,684 | INFO     | mean y: 2893889.2505995203
[2025-11-21 11:56:46] 2025-11-21 16:56:13,684 | INFO     | intersect: -18983768440.710884
[2025-11-21 11:56:46] 2025-11-21 16:56:13,686 | INFO     | chi2: 3.1722969283292732
[2025-11-21 11:56:46] 2025-11-21 16:56:13,686 | INFO     | current chi2=3.1722969283292732 (change=52.56784123546008 %)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,687 | INFO     | sum of square deviations: 176594369488.07733
[2025-11-21 11:56:46] 2025-11-21 16:56:13,705 | INFO     | sum of deviations: 2045031007262.8188
[2025-11-21 11:56:46] 2025-11-21 16:56:13,705 | INFO     | mean x: 1763718249.6260555
[2025-11-21 11:56:46] 2025-11-21 16:56:13,705 | INFO     | mean y: 2899070.0639324486
[2025-11-21 11:56:46] 2025-11-21 16:56:13,705 | INFO     | intersect: -20421639486.9488
[2025-11-21 11:56:46] 2025-11-21 16:56:13,706 | INFO     | chi2: 2.4904803362867685
[2025-11-21 11:56:46] 2025-11-21 16:56:13,706 | INFO     | current chi2=2.4904803362867685 (change=21.49283649817709 %)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,707 | INFO     | right removable region: 828
[2025-11-21 11:56:46] 2025-11-21 16:56:13,708 | INFO     | sum of square deviations: 179808223909.85123
[2025-11-21 11:56:46] 2025-11-21 16:56:13,725 | INFO     | sum of deviations: 1384787747949.0527
[2025-11-21 11:56:46] 2025-11-21 16:56:13,725 | INFO     | mean x: 1763718707.1103117
[2025-11-21 11:56:46] 2025-11-21 16:56:13,726 | INFO     | mean y: 2891718.912470024
[2025-11-21 11:56:46] 2025-11-21 16:56:13,726 | INFO     | intersect: -13580336029.666008
[2025-11-21 11:56:46] 2025-11-21 16:56:13,727 | INFO     | chi2: 4.309110619673297
[2025-11-21 11:56:46] 2025-11-21 16:56:13,727 | INFO     | current chi2=4.309110619673297 (change=35.570211848374036 %)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,728 | INFO     | sum of square deviations: 176592069931.78296
[2025-11-21 11:56:46] 2025-11-21 16:56:13,746 | INFO     | sum of deviations: 1337621397074.1868
[2025-11-21 11:56:46] 2025-11-21 16:56:13,746 | INFO     | mean x: 1763718859.6176116
[2025-11-21 11:56:46] 2025-11-21 16:56:13,746 | INFO     | mean y: 2893954.439083233
[2025-11-21 11:56:46] 2025-11-21 16:56:13,746 | INFO     | intersect: -13356641872.731125
[2025-11-21 11:56:46] 2025-11-21 16:56:13,747 | INFO     | chi2: 4.292374433545949
[2025-11-21 11:56:46] 2025-11-21 16:56:13,747 | INFO     | current chi2=4.292374433545949 (change=0.38839072849368966 %)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,748 | INFO     | left removable region: 20
[2025-11-21 11:56:46] 2025-11-21 16:56:13,749 | INFO     | sum of square deviations: 163504799344.43625
[2025-11-21 11:56:46] 2025-11-21 16:56:13,765 | INFO     | sum of deviations: 1691944554350.0557
[2025-11-21 11:56:46] 2025-11-21 16:56:13,765 | INFO     | mean x: 1763718829.1633663
[2025-11-21 11:56:46] 2025-11-21 16:56:13,766 | INFO     | mean y: 2915597.582920792
[2025-11-21 11:56:46] 2025-11-21 16:56:13,766 | INFO     | intersect: -18248013307.08692
[2025-11-21 11:56:46] 2025-11-21 16:56:13,767 | INFO     | chi2: 0.0519166128486233
[2025-11-21 11:56:46] 2025-11-21 16:56:13,767 | INFO     | current memory leak: 10.35 B/s (using 808 data points, chi2=0.05)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,768 | INFO     | could have reported an average CPU frequency of 2600 MHz (32 samples)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,768 | INFO     | ..............................
[2025-11-21 11:56:46] 2025-11-21 16:56:13,768 | INFO     | . Timing measurements:
[2025-11-21 11:56:46] 2025-11-21 16:56:13,768 | INFO     | . get job = 0 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,769 | INFO     | . initial setup = 5 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,769 | INFO     | . payload setup = 21 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,769 | INFO     | . stage-in = 0 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,769 | INFO     | . payload execution = 51175 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,769 | INFO     | . stage-out = 4 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,769 | INFO     | . log creation = 0 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,769 | INFO     | ..............................
[2025-11-21 11:56:46] 2025-11-21 16:56:13,907 | INFO     | 
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | job summary report
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | --------------------------------------------------
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | PanDA job id: 6891601300
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | task id: 47493068
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | errors: (none)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | pilot state: finished 
[2025-11-21 11:56:46] 2025-11-21 16:56:13,908 | INFO     | transexitcode: 0
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | exeerrorcode: 0
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | exeerrordiag: 
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | exitcode: 0
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | exitmsg: OK
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | cpuconsumptiontime: 288793 s
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | nevents: 1000
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | neventsw: 0
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | pid: 2303303
[2025-11-21 11:56:46] 2025-11-21 16:56:13,909 | INFO     | pgrp: 2303303
[2025-11-21 11:56:46] 2025-11-21 16:56:13,910 | INFO     | corecount: 8
[2025-11-21 11:56:46] 2025-11-21 16:56:13,910 | INFO     | event service: False
[2025-11-21 11:56:46] 2025-11-21 16:56:13,910 | INFO     | sizes: {0: 2298625, 1: 2298824, 12: 2298824, 21: 2299114, 23: 2299142, 51199: 2348096, 51205: 2357090, 51206: 2357146, 51214: 2357392}
[2025-11-21 11:56:46] 2025-11-21 16:56:13,910 | INFO     | --------------------------------------------------
[2025-11-21 11:56:46] 2025-11-21 16:56:13,910 | INFO     | 
[2025-11-21 11:56:46] 2025-11-21 16:56:13,910 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 11:56:46] 2025-11-21 16:56:13,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 11:56:46] 2025-11-21 16:56:13,935 | INFO     | job 6891601300 has completed (purged errors)
[2025-11-21 11:56:46] 2025-11-21 16:56:13,935 | INFO     | overall cleanup function is called
[2025-11-21 11:56:46] 2025-11-21 16:56:14,950 | INFO     | --- collectZombieJob: --- 10, [2303303]
[2025-11-21 11:56:46] 2025-11-21 16:56:14,951 | INFO     | zombie collector waiting for pid 2303303
[2025-11-21 11:56:46] 2025-11-21 16:56:14,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 11:56:46] 2025-11-21 16:56:14,951 | INFO     | collected zombie processes
[2025-11-21 11:56:46] 2025-11-21 16:56:14,952 | INFO     | will attempt to kill all subprocesses of pid=2303303
[2025-11-21 11:56:46] 2025-11-21 16:56:15,225 | INFO     | process IDs to be killed: [2303303] (in reverse order)
[2025-11-21 11:56:46] 2025-11-21 16:56:15,313 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 11:56:46] 2025-11-21 16:56:15,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 11:56:46] 2025-11-21 16:56:15,323 | INFO     | did not find any defunct processes belonging to 2303303
[2025-11-21 11:56:46] 2025-11-21 16:56:15,332 | INFO     | did not find any defunct processes belonging to 2303303
[2025-11-21 11:56:46] 2025-11-21 16:56:15,334 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 11:56:46] 2025-11-21 16:56:15,335 | INFO     | ready for new job
[2025-11-21 11:56:46] 2025-11-21 16:56:15,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 11:56:46] 2025-11-21 16:56:15,340 | INFO     | ***************************************
[2025-11-21 11:56:46] 2025-11-21 16:56:15,341 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 11:56:46] 2025-11-21 16:56:15,341 | INFO     | ***************************************
[2025-11-21 11:56:46] 2025-11-21 16:56:15,341 | INFO     | 
[2025-11-21 11:56:46] 2025-11-21 16:56:15,343 | INFO     | architecture information:
[2025-11-21 11:56:46] 2025-11-21 16:56:15,343 | INFO     | executing command: cat /etc/os-release
[2025-11-21 11:56:46] 2025-11-21 16:56:15,361 | INFO     | cat /etc/os-release:
[2025-11-21 11:56:46] NAME="CentOS Linux"
[2025-11-21 11:56:46] VERSION="7 (Core)"
[2025-11-21 11:56:46] ID="centos"
[2025-11-21 11:56:46] ID_LIKE="rhel fedora"
[2025-11-21 11:56:46] VERSION_ID="7"
[2025-11-21 11:56:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 11:56:46] ANSI_COLOR="0;31"
[2025-11-21 11:56:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 11:56:46] HOME_URL="https://www.centos.org/"
[2025-11-21 11:56:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 11:56:46] 
[2025-11-21 11:56:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 11:56:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 11:56:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 11:56:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 11:56:46] 
[2025-11-21 11:56:46] 2025-11-21 16:56:15,362 | INFO     | ***************************************
[2025-11-21 11:56:46] 2025-11-21 16:56:15,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 11:56:46] 2025-11-21 16:56:15,887 | INFO     | sufficient remaining disk space (46702526464 B)
[2025-11-21 11:56:46] 2025-11-21 16:56:15,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 11:56:46] 2025-11-21 16:56:15,887 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 11:56:46] 2025-11-21 16:56:15,887 | INFO     | update_server=False
[2025-11-21 11:56:46] 2025-11-21 16:56:15,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 11:56:46] 2025-11-21 16:56:15,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 11:56:46] 2025-11-21 16:56:15,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:56:46] 2025-11-21 16:56:15,889 | INFO     | aborting loop
[2025-11-21 11:56:46] 2025-11-21 16:56:15,983 | INFO     | all data control threads have been joined
[2025-11-21 11:56:46] 2025-11-21 16:56:16,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 11:56:46] 2025-11-21 16:56:16,695 | INFO     | all payload control threads have been joined
[2025-11-21 11:56:46] 2025-11-21 16:56:16,708 | INFO     | all job control threads have been joined
[2025-11-21 11:56:46] 2025-11-21 16:56:16,892 | INFO     | [job] retrieve thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:16,895 | INFO     | [job] job monitor thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:16,896 | INFO     | [payload] validate_post thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:16,988 | INFO     | [data] control thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,098 | INFO     | [job] validate thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,205 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,322 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,396 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,480 | INFO     | [payload] failed_post thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,700 | INFO     | [payload] control thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,713 | INFO     | [job] control thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:17,894 | INFO     | [data] copytool_out thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:18,266 | INFO     | [data] copytool_in thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:18,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:56:46] 2025-11-21 16:56:19,894 | INFO     | [job] queue monitor thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:20,693 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 11:56:46] 2025-11-21 16:56:32,671 | INFO     | [monitor] cgroup control has ended
[2025-11-21 11:56:46] 2025-11-21 16:56:33,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036432873280)>', '<ExcThread(monitor, started 140035730962176)>']
[2025-11-21 11:56:46] 2025-11-21 16:56:38,289 | INFO     | all workflow threads have been joined
[2025-11-21 11:56:46] 2025-11-21 16:56:38,290 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 11:56:46] 2025-11-21 16:56:38,290 | INFO     | traces error code: 0
[2025-11-21 11:56:46] 2025-11-21 16:56:38,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 11:56:46] 2025-11-21 16:56:45,865 | INFO     | PID=2295644 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 11:56:46] 2025-11-21 16:56:45,865 | INFO     | .. there are 10 such processes running
[2025-11-21 11:56:46] 2025-11-21 16:56:45,866 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 11:56:46] 2025-11-21 16:56:45,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 11:56:46] 2025-11-21 16:56:45,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 11:56:46] 2025-11-21 16:56:45,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 11:56:46] 2025-11-21 16:56:45,866 | CRITICAL | thread 'MainThread' is not alive
[2025-11-21 11:56:46] 2025-11-21 16:56:45,866 | INFO     | [monitor] control thread has ended
[2025-11-21 11:56:46] 2025-11-21 16:56:45,990 [wrapper] ==== pilot stdout END ====
[2025-11-21 11:56:46] 2025-11-21 16:56:45,992 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 11:56:46] 2025-11-21 16:56:45,995 [wrapper] pilotpid: 2295644
[2025-11-21 11:56:46] 2025-11-21 16:56:45,997 [wrapper] Pilot exit status: 0
[2025-11-21 11:56:46] 2025-11-21 16:56:46,013 [wrapper] pandaids: 6891601300
[2025-11-21 11:56:46] 2025-11-21 16:56:46,059 [wrapper] cleanup supervisor_pilot 3462682 2295645
[2025-11-21 11:56:46] 2025-11-21 16:56:46,062 [wrapper] Test setup, not cleaning
[2025-11-21 11:56:46] 2025-11-21 16:56:46,065 [wrapper] apfmon messages muted
[2025-11-21 11:56:46] 2025-11-21 16:56:46,068 [wrapper] ==== wrapper stdout END ====
[2025-11-21 11:56:46] 2025-11-21 16:56:46,071 [wrapper] ==== wrapper stderr END ====
[2025-11-21 11:56:46]  *** Error codes and diagnostics ***
[2025-11-21 11:56:46]     "exeErrorCode": 0,
[2025-11-21 11:56:46]     "exeErrorDiag": "",
[2025-11-21 11:56:46]     "pilotErrorCode": 0,
[2025-11-21 11:56:46]     "pilotErrorDiag": "",
[2025-11-21 11:56:46]  *** Listing of results directory ***
[2025-11-21 11:56:46] total 1326544
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:50 pilot3.tar.gz
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 14:11 queuedata.json
[2025-11-21 11:56:46] -rwx------. 1 boincer umatlas     36292 Nov 18 14:12 runpilot2-wrapper.sh
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas       100 Nov 20 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 11:56:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 21:41 run_atlas
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas       105 Nov 20 21:41 job.xml
[2025-11-21 11:56:46] -rw-r--r--. 2 boincer umatlas 410906375 Nov 20 21:41 EVNT.47493065._000831.pool.root.1
[2025-11-21 11:56:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 21:41 shared
[2025-11-21 11:56:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 20 21:41 input.tar.gz
[2025-11-21 11:56:46] -rw-r--r--. 2 boincer umatlas     15120 Nov 20 21:41 start_atlas.sh
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas         0 Nov 20 21:41 boinc_lockfile
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas      2773 Nov 20 21:41 pandaJob.out
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas    989817 Nov 20 21:42 agis_schedconf.cvmfs.json
[2025-11-21 11:56:46] drwx------. 5 boincer umatlas      4096 Nov 20 21:42 pilot3
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas       532 Nov 21 11:45 boinc_task_state.xml
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas      6661 Nov 21 11:46 init_data.xml
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas 925419002 Nov 21 11:55 HITS.47493068._006953.pool.root.1
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas      1057 Nov 21 11:55 memory_monitor_summary.json
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas   1526164 Nov 21 11:56 agis_ddmendpoints.agis.ALL.json
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas   2055565 Nov 21 11:56 log.47493068._006953.job.log.tgz.1
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas      8627 Nov 21 11:56 heartbeat.json
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas        29 Nov 21 11:56 wrapper_checkpoint.txt
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 11:56 boinc_mmap_file
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas        95 Nov 21 11:56 pilot_heartbeat.json
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas       893 Nov 21 11:56 pilotlog.txt
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas   7013714 Nov 21 11:56 log.47493068._006953.job.log.1
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas       353 Nov 21 11:56 output.list
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas       620 Nov 21 11:56 runtime_log
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas   9093120 Nov 21 11:56 result.tar.gz
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas       660 Nov 21 11:56 v7YMDmeIgf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmclFKDmnthTSo.diag
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas      8699 Nov 21 11:56 runtime_log.err
[2025-11-21 11:56:46] -rw-r--r--. 1 boincer umatlas     21337 Nov 21 11:56 stderr.txt
[2025-11-21 11:56:46] HITS file was successfully produced:
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas 925419002 Nov 21 11:55 shared/HITS.pool.root.1
[2025-11-21 11:56:46]  *** Contents of shared directory: ***
[2025-11-21 11:56:46] total 1314488
[2025-11-21 11:56:46] -rw-r--r--. 2 boincer umatlas 410906375 Nov 20 21:41 ATLAS.root_0
[2025-11-21 11:56:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 20 21:41 input.tar.gz
[2025-11-21 11:56:46] -rw-r--r--. 2 boincer umatlas     15120 Nov 20 21:41 start_atlas.sh
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas 925419002 Nov 21 11:55 HITS.pool.root.1
[2025-11-21 11:56:46] -rw-------. 1 boincer umatlas   9093120 Nov 21 11:56 result.tar.gz
11:56:47 (2291596): run_atlas exited; CPU time 289495.956951
11:56:47 (2291596): called boinc_finish(0)

</stderr_txt>
]]>

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