Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:54 (1265613): wrapper (7.7.26015): starting
23:12:54 (1265613): wrapper: running run_atlas (--nthreads 9)
[2025-11-19 23:12:54] Arguments: --nthreads 9
[2025-11-19 23:12:54] Threads: 9
[2025-11-19 23:12:54] Checking for CVMFS
[2025-11-19 23:12:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 23:12:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 23:12:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 23:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 23:12:56] 2.13.3.0 9393 20868 317612 153067 2 457 31065533 32935936 15493 16776704 0 77905016 99.528 90659474 39688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 23:12:56] CVMFS is ok
[2025-11-19 23:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 23:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 23:12:56] Further information can be found at the LHC@home message board.
[2025-11-19 23:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 23:12:56] Checking for apptainer binary...
[2025-11-19 23:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 23:12:56] Running /usr/bin/apptainer --version
[2025-11-19 23:12:56] apptainer version 1.4.4-1.el9
[2025-11-19 23:12:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 23:12:57] c6-6-39-1.aglt2.org
[2025-11-19 23:12:57] apptainer works
[2025-11-19 23:12:57] Set ATHENA_PROC_NUMBER=9
[2025-11-19 23:12:57] Set ATHENA_CORE_NUMBER=9
[2025-11-19 23:13:17] Starting ATLAS job with PandaID=6891561663
[2025-11-19 23:13:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 21:59:39]  *** The last 200 lines of the pilot log: ***
[2025-11-20 21:59:39] 2025-11-21 02:58:58,140 | INFO     | monitor loop #4417: job 0:6891561663 is in state 'finished'
[2025-11-20 21:59:39] 2025-11-21 02:58:58,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,185 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-20 21:59:39] 2025-11-21 02:58:58,196 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2899.393178571429
[2025-11-20 21:59:39] 2025-11-21 02:58:58,207 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891561663/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,208 | INFO     | extracted standard info from prmon json
[2025-11-20 21:59:39] 2025-11-21 02:58:58,208 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 21:59:39] 2025-11-21 02:58:58,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 21:59:39] 2025-11-21 02:58:58,238 | INFO     | fitting pss+swap vs Time
[2025-11-20 21:59:39] 2025-11-21 02:58:58,242 | INFO     | sum of square deviations: 747685773760.9941
[2025-11-20 21:59:39] 2025-11-21 02:58:58,305 | INFO     | sum of deviations: 4540355960384.015
[2025-11-20 21:59:39] 2025-11-21 02:58:58,306 | INFO     | mean x: 1763653000.002237
[2025-11-20 21:59:39] 2025-11-21 02:58:58,306 | INFO     | mean y: 3099915.3251304994
[2025-11-20 21:59:39] 2025-11-21 02:58:58,306 | INFO     | intersect: -10706763360.967493
[2025-11-20 21:59:39] 2025-11-21 02:58:58,308 | INFO     | chi2: 7.856786579553133
[2025-11-20 21:59:39] 2025-11-21 02:58:58,317 | INFO     | sum of square deviations: 739355532384.9197
[2025-11-20 21:59:39] 2025-11-21 02:58:58,392 | INFO     | sum of deviations: 5024100230788.5205
[2025-11-20 21:59:39] 2025-11-21 02:58:58,393 | INFO     | mean x: 1763652847.528443
[2025-11-20 21:59:39] 2025-11-21 02:58:58,393 | INFO     | mean y: 3108770.9071856285
[2025-11-20 21:59:39] 2025-11-21 02:58:58,393 | INFO     | intersect: -11981340239.322756
[2025-11-20 21:59:39] 2025-11-21 02:58:58,399 | INFO     | chi2: 4.749514647136076
[2025-11-20 21:59:39] 2025-11-21 02:58:58,399 | INFO     | current chi2=4.749514647136076 (change=39.54889064319968 %)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,400 | INFO     | sum of square deviations: 731086617956.0316
[2025-11-20 21:59:39] 2025-11-21 02:58:58,454 | INFO     | sum of deviations: 5147074995761.778
[2025-11-20 21:59:39] 2025-11-21 02:58:58,454 | INFO     | mean x: 1763652695.0473328
[2025-11-20 21:59:39] 2025-11-21 02:58:58,455 | INFO     | mean y: 3111033.4320060103
[2025-11-20 21:59:39] 2025-11-21 02:58:58,455 | INFO     | intersect: -12413547218.725933
[2025-11-20 21:59:39] 2025-11-21 02:58:58,456 | INFO     | chi2: 4.18869270036847
[2025-11-20 21:59:39] 2025-11-21 02:58:58,456 | INFO     | current chi2=4.18869270036847 (change=11.807984361218407 %)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,457 | INFO     | right removable region: 1330
[2025-11-20 21:59:39] 2025-11-21 02:58:58,458 | INFO     | sum of square deviations: 739349804484.9196
[2025-11-20 21:59:39] 2025-11-21 02:58:58,488 | INFO     | sum of deviations: 4010152693899.43
[2025-11-20 21:59:39] 2025-11-21 02:58:58,489 | INFO     | mean x: 1763653152.528443
[2025-11-20 21:59:39] 2025-11-21 02:58:58,489 | INFO     | mean y: 3109613.4229041915
[2025-11-20 21:59:39] 2025-11-21 02:58:58,489 | INFO     | intersect: -9562752712.926592
[2025-11-20 21:59:39] 2025-11-21 02:58:58,491 | INFO     | chi2: 4.369239130351056
[2025-11-20 21:59:39] 2025-11-21 02:58:58,491 | INFO     | current chi2=4.369239130351056 (change=44.388980327889186 %)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,492 | INFO     | sum of square deviations: 731076301453.4229
[2025-11-20 21:59:39] 2025-11-21 02:58:58,523 | INFO     | sum of deviations: 3831490725761.332
[2025-11-20 21:59:39] 2025-11-21 02:58:58,523 | INFO     | mean x: 1763653305.0518408
[2025-11-20 21:59:39] 2025-11-21 02:58:58,523 | INFO     | mean y: 3112904.5604808414
[2025-11-20 21:59:39] 2025-11-21 02:58:58,523 | INFO     | intersect: -9240000664.20149
[2025-11-20 21:59:39] 2025-11-21 02:58:58,525 | INFO     | chi2: 4.015051334374578
[2025-11-20 21:59:39] 2025-11-21 02:58:58,525 | INFO     | current chi2=4.015051334374578 (change=8.106395310709837 %)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,525 | INFO     | left removable region: 20
[2025-11-20 21:59:39] 2025-11-21 02:58:58,527 | INFO     | sum of square deviations: 697013438269.8536
[2025-11-20 21:59:39] 2025-11-21 02:58:58,576 | INFO     | sum of deviations: 4240658418620.1
[2025-11-20 21:59:39] 2025-11-21 02:58:58,576 | INFO     | mean x: 1763653274.6343513
[2025-11-20 21:59:39] 2025-11-21 02:58:58,576 | INFO     | mean y: 3127658.7977099237
[2025-11-20 21:59:39] 2025-11-21 02:58:58,577 | INFO     | intersect: -10727011382.954168
[2025-11-20 21:59:39] 2025-11-21 02:58:58,578 | INFO     | chi2: 0.25325489058352707
[2025-11-20 21:59:39] 2025-11-21 02:58:58,578 | INFO     | current memory leak: 6.08 B/s (using 1310 data points, chi2=0.25)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,584 | INFO     | could have reported an average CPU frequency of 2877 MHz (48 samples)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,584 | INFO     | ..............................
[2025-11-20 21:59:39] 2025-11-21 02:58:58,584 | INFO     | . Timing measurements:
[2025-11-20 21:59:39] 2025-11-21 02:58:58,584 | INFO     | . get job = 0 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,584 | INFO     | . initial setup = 4 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,585 | INFO     | . payload setup = 26 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,585 | INFO     | . stage-in = 0 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,585 | INFO     | . payload execution = 81805 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,585 | INFO     | . stage-out = 7 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,585 | INFO     | . log creation = 2 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,585 | INFO     | ..............................
[2025-11-20 21:59:39] 2025-11-21 02:58:58,791 | INFO     | 
[2025-11-20 21:59:39] 2025-11-21 02:58:58,791 | INFO     | job summary report
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | --------------------------------------------------
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | PanDA job id: 6891561663
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | task id: 47493068
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | errors: (none)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | pilot state: finished 
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | transexitcode: 0
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | exeerrorcode: 0
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | exeerrordiag: 
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | exitcode: 0
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | exitmsg: OK
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | cpuconsumptiontime: 250521 s
[2025-11-20 21:59:39] 2025-11-21 02:58:58,792 | INFO     | nevents: 1000
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | neventsw: 0
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | pid: 1282598
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | pgrp: 1282598
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | corecount: 9
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | event service: False
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | sizes: {0: 2297196, 1: 2297196, 12: 2297224, 20: 2297514, 22: 2297542, 81836: 2358567, 81844: 2369157, 81846: 2369213, 81863: 2369459}
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | --------------------------------------------------
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | 
[2025-11-20 21:59:39] 2025-11-21 02:58:58,793 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 21:59:39] 2025-11-21 02:58:58,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,844 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,844 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 21:59:39] 2025-11-21 02:58:58,846 | INFO     | job 6891561663 has completed (purged errors)
[2025-11-20 21:59:39] 2025-11-21 02:58:58,846 | INFO     | overall cleanup function is called
[2025-11-20 21:59:39] 2025-11-21 02:58:59,877 | INFO     | --- collectZombieJob: --- 10, [1282598]
[2025-11-20 21:59:39] 2025-11-21 02:58:59,878 | INFO     | zombie collector waiting for pid 1282598
[2025-11-20 21:59:39] 2025-11-21 02:58:59,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 21:59:39] 2025-11-21 02:58:59,878 | INFO     | collected zombie processes
[2025-11-20 21:59:39] 2025-11-21 02:58:59,878 | INFO     | will attempt to kill all subprocesses of pid=1282598
[2025-11-20 21:59:39] 2025-11-21 02:59:00,692 | INFO     | process IDs to be killed: [1282598] (in reverse order)
[2025-11-20 21:59:39] 2025-11-21 02:59:01,070 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 21:59:39] 2025-11-21 02:59:01,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 21:59:39] 2025-11-21 02:59:01,100 | INFO     | did not find any defunct processes belonging to 1282598
[2025-11-20 21:59:39] 2025-11-21 02:59:01,115 | INFO     | did not find any defunct processes belonging to 1282598
[2025-11-20 21:59:39] 2025-11-21 02:59:01,116 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 21:59:39] 2025-11-21 02:59:01,117 | INFO     | ready for new job
[2025-11-20 21:59:39] 2025-11-21 02:59:01,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 21:59:39] 2025-11-21 02:59:01,122 | INFO     | ***************************************
[2025-11-20 21:59:39] 2025-11-21 02:59:01,123 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 21:59:39] 2025-11-21 02:59:01,123 | INFO     | ***************************************
[2025-11-20 21:59:39] 2025-11-21 02:59:01,123 | INFO     | 
[2025-11-20 21:59:39] 2025-11-21 02:59:01,126 | INFO     | architecture information:
[2025-11-20 21:59:39] 2025-11-21 02:59:01,127 | INFO     | executing command: cat /etc/os-release
[2025-11-20 21:59:39] 2025-11-21 02:59:01,186 | INFO     | cat /etc/os-release:
[2025-11-20 21:59:39] NAME="CentOS Linux"
[2025-11-20 21:59:39] VERSION="7 (Core)"
[2025-11-20 21:59:39] ID="centos"
[2025-11-20 21:59:39] ID_LIKE="rhel fedora"
[2025-11-20 21:59:39] VERSION_ID="7"
[2025-11-20 21:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 21:59:39] ANSI_COLOR="0;31"
[2025-11-20 21:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 21:59:39] HOME_URL="https://www.centos.org/"
[2025-11-20 21:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 21:59:39] 
[2025-11-20 21:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 21:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 21:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 21:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 21:59:39] 
[2025-11-20 21:59:39] 2025-11-21 02:59:01,186 | INFO     | ***************************************
[2025-11-20 21:59:39] 2025-11-21 02:59:01,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 21:59:39] 2025-11-21 02:59:01,735 | INFO     | sufficient remaining disk space (68445798400 B)
[2025-11-20 21:59:39] 2025-11-21 02:59:01,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 21:59:39] 2025-11-21 02:59:01,736 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 21:59:39] 2025-11-21 02:59:01,736 | INFO     | update_server=False
[2025-11-20 21:59:39] 2025-11-21 02:59:01,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 21:59:39] 2025-11-21 02:59:01,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 21:59:39] 2025-11-21 02:59:01,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:59:39] 2025-11-21 02:59:01,742 | INFO     | aborting loop
[2025-11-20 21:59:39] 2025-11-21 02:59:01,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 21:59:39] 2025-11-21 02:59:01,933 [wrapper] supervise_pilot (15 min periods counter: 92)
[2025-11-20 21:59:39] 2025-11-21 02:59:02,623 | INFO     | all data control threads have been joined
[2025-11-20 21:59:39] 2025-11-21 02:59:02,702 | INFO     | all job control threads have been joined
[2025-11-20 21:59:39] 2025-11-21 02:59:02,747 | INFO     | [job] job monitor thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:02,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:02,749 | INFO     | [job] retrieve thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:02,775 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:02,863 | INFO     | all payload control threads have been joined
[2025-11-20 21:59:39] 2025-11-21 02:59:03,433 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:03,473 | INFO     | [payload] failed_post thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:03,630 | INFO     | [data] control thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:03,661 | INFO     | [job] validate thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:03,708 | INFO     | [job] control thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:03,753 | INFO     | [data] copytool_out thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:03,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:59:39] 2025-11-21 02:59:03,869 | INFO     | [payload] control thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:04,101 | INFO     | [payload] validate_post thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:04,179 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:04,188 | INFO     | [data] copytool_in thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:04,813 | INFO     | [job] queue monitor thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:05,747 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 21:59:39] 2025-11-21 02:59:31,183 | INFO     | PID=1270099 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 21:59:39] 2025-11-21 02:59:31,183 | INFO     | .. there are 25 such processes running
[2025-11-20 21:59:39] 2025-11-21 02:59:31,192 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 21:59:39] 2025-11-21 02:59:31,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 21:59:39] 2025-11-21 02:59:31,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 21:59:39] 2025-11-21 02:59:32,842 | INFO     | [monitor] cgroup control has ended
[2025-11-20 21:59:39] 2025-11-21 02:59:33,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887972087616)>', '<ExcThread(monitor, started 139887336478464)>']
[2025-11-20 21:59:39] 2025-11-21 02:59:33,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 21:59:39] 2025-11-21 02:59:33,208 | INFO     | [monitor] control thread has ended
[2025-11-20 21:59:39] 2025-11-21 02:59:38,086 | INFO     | all workflow threads have been joined
[2025-11-20 21:59:39] 2025-11-21 02:59:38,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 21:59:39] 2025-11-21 02:59:38,087 | INFO     | traces error code: 0
[2025-11-20 21:59:39] 2025-11-21 02:59:38,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 21:59:39] 2025-11-21 02:59:38,543 [wrapper] ==== pilot stdout END ====
[2025-11-20 21:59:39] 2025-11-21 02:59:38,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 21:59:39] 2025-11-21 02:59:38,581 [wrapper] pilotpid: 1270099
[2025-11-20 21:59:39] 2025-11-21 02:59:38,595 [wrapper] Pilot exit status: 0
[2025-11-20 21:59:39] 2025-11-21 02:59:38,753 [wrapper] pandaids: 6891561663
[2025-11-20 21:59:39] 2025-11-21 02:59:38,843 [wrapper] cleanup supervisor_pilot 1038114 1270100
[2025-11-20 21:59:39] 2025-11-21 02:59:38,847 [wrapper] Test setup, not cleaning
[2025-11-20 21:59:39] 2025-11-21 02:59:38,850 [wrapper] apfmon messages muted
[2025-11-20 21:59:39] 2025-11-21 02:59:38,853 [wrapper] ==== wrapper stdout END ====
[2025-11-20 21:59:39] 2025-11-21 02:59:38,856 [wrapper] ==== wrapper stderr END ====
[2025-11-20 21:59:39]  *** Error codes and diagnostics ***
[2025-11-20 21:59:39]     "exeErrorCode": 0,
[2025-11-20 21:59:39]     "exeErrorDiag": "",
[2025-11-20 21:59:39]     "pilotErrorCode": 0,
[2025-11-20 21:59:39]     "pilotErrorDiag": "",
[2025-11-20 21:59:39]  *** Listing of results directory ***
[2025-11-20 21:59:39] total 1320808
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:27 queuedata.json
[2025-11-20 21:59:39] -rwx------. 1 boincer umatlas     36292 Nov 18 10:27 runpilot2-wrapper.sh
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas       100 Nov 19 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 21:59:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 23:12 run_atlas
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas       105 Nov 19 23:12 job.xml
[2025-11-20 21:59:39] -rw-r--r--. 2 boincer umatlas 409102605 Nov 19 23:12 EVNT.47493065._000094.pool.root.1
[2025-11-20 21:59:39] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 23:12 start_atlas.sh
[2025-11-20 21:59:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 23:12 shared
[2025-11-20 21:59:39] -rw-r--r--. 2 boincer umatlas    590105 Nov 19 23:12 input.tar.gz
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas         0 Nov 19 23:12 boinc_lockfile
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas      2771 Nov 19 23:12 pandaJob.out
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas    989427 Nov 19 23:13 agis_schedconf.cvmfs.json
[2025-11-20 21:59:39] drwx------. 5 boincer umatlas      4096 Nov 19 23:13 pilot3
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas       533 Nov 20 21:47 boinc_task_state.xml
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas      6844 Nov 20 21:54 init_data.xml
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas 915275245 Nov 20 21:57 HITS.47493068._000933.pool.root.1
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas      1057 Nov 20 21:58 memory_monitor_summary.json
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas   1526164 Nov 20 21:58 agis_ddmendpoints.agis.ALL.json
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas   2460003 Nov 20 21:58 log.47493068._000933.job.log.tgz.1
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas        95 Nov 20 21:58 pilot_heartbeat.json
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas      8615 Nov 20 21:58 heartbeat.json
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 21:59 boinc_mmap_file
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas        29 Nov 20 21:59 wrapper_checkpoint.txt
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas      4824 Nov 20 21:59 pilotlog.txt
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas   9648237 Nov 20 21:59 log.47493068._000933.job.log.1
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas       353 Nov 20 21:59 output.list
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas       620 Nov 20 21:59 runtime_log
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas  12124160 Nov 20 21:59 result.tar.gz
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas      8709 Nov 20 21:59 runtime_log.err
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas       661 Nov 20 21:59 N3JNDmYncf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgDFKDmT9EMCo.diag
[2025-11-20 21:59:39] -rw-r--r--. 1 boincer umatlas     21327 Nov 20 21:59 stderr.txt
[2025-11-20 21:59:39] HITS file was successfully produced:
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas 915275245 Nov 20 21:57 shared/HITS.pool.root.1
[2025-11-20 21:59:39]  *** Contents of shared directory: ***
[2025-11-20 21:59:39] total 1305780
[2025-11-20 21:59:39] -rw-r--r--. 2 boincer umatlas 409102605 Nov 19 23:12 ATLAS.root_0
[2025-11-20 21:59:39] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 23:12 start_atlas.sh
[2025-11-20 21:59:39] -rw-r--r--. 2 boincer umatlas    590105 Nov 19 23:12 input.tar.gz
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas 915275245 Nov 20 21:57 HITS.pool.root.1
[2025-11-20 21:59:39] -rw-------. 1 boincer umatlas  12124160 Nov 20 21:59 result.tar.gz
21:59:40 (1265613): run_atlas exited; CPU time 252015.551609
21:59:40 (1265613): called boinc_finish(0)

</stderr_txt>
]]>

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