Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:28:49 (863761): wrapper (7.7.26015): starting
21:28:49 (863761): wrapper: running run_atlas (--nthreads 9)
[2025-11-19 21:28:49] Arguments: --nthreads 9
[2025-11-19 21:28:49] Threads: 9
[2025-11-19 21:28:49] Checking for CVMFS
[2025-11-19 21:28:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 21:28:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 21:28:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 21:28:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 21:28:50] 2.13.2.0 10183 24603 174360 153065 2 126 27754075 39288832 8249 16776704 0 12230787 99.413 15167809 37291 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 21:28:50] CVMFS is ok
[2025-11-19 21:28:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 21:28:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 21:28:50] Further information can be found at the LHC@home message board.
[2025-11-19 21:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 21:28:50] Checking for apptainer binary...
[2025-11-19 21:28:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 21:28:50] Running /usr/bin/apptainer --version
[2025-11-19 21:28:50] apptainer version 1.4.4-1.el9
[2025-11-19 21:28:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 21:28:50] c-210-5.aglt2.org
[2025-11-19 21:28:50] apptainer works
[2025-11-19 21:28:50] Set ATHENA_PROC_NUMBER=9
[2025-11-19 21:28:50] Set ATHENA_CORE_NUMBER=9
[2025-11-19 21:28:50] Starting ATLAS job with PandaID=6891599022
[2025-11-19 21:28:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 08:02:18]  *** The last 200 lines of the pilot log: ***
[2025-11-21 08:02:18] 2025-11-21 13:01:44,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 08:02:18] 2025-11-21 13:01:44,350 | INFO     | fitting pss+swap vs Time
[2025-11-21 08:02:18] 2025-11-21 13:01:44,353 | INFO     | sum of square deviations: 2624233812574.651
[2025-11-21 08:02:18] 2025-11-21 13:01:44,453 | INFO     | sum of deviations: 10744523722841.318
[2025-11-21 08:02:18] 2025-11-21 13:01:44,453 | INFO     | mean x: 1763667930.3483808
[2025-11-21 08:02:18] 2025-11-21 13:01:44,453 | INFO     | mean y: 3071838.7389597646
[2025-11-21 08:02:18] 2025-11-21 13:01:44,453 | INFO     | intersect: -7217996583.609771
[2025-11-21 08:02:18] 2025-11-21 13:01:44,456 | INFO     | chi2: 14.11596708352881
[2025-11-21 08:02:18] 2025-11-21 13:01:44,459 | INFO     | sum of square deviations: 2604965478784.325
[2025-11-21 08:02:18] 2025-11-21 13:01:44,558 | INFO     | sum of deviations: 11400364581341.033
[2025-11-21 08:02:18] 2025-11-21 13:01:44,559 | INFO     | mean x: 1763667777.860305
[2025-11-21 08:02:18] 2025-11-21 13:01:44,559 | INFO     | mean y: 3077028.457943925
[2025-11-21 08:02:18] 2025-11-21 13:01:44,559 | INFO     | intersect: -7715434342.124313
[2025-11-21 08:02:18] 2025-11-21 13:01:44,561 | INFO     | chi2: 11.50508873894037
[2025-11-21 08:02:18] 2025-11-21 13:01:44,562 | INFO     | current chi2=11.50508873894037 (change=18.49592258992257 %)
[2025-11-21 08:02:18] 2025-11-21 13:01:44,562 | INFO     | right removable region: 2032
[2025-11-21 08:02:18] 2025-11-21 13:01:44,564 | INFO     | sum of square deviations: 2604959451374.325
[2025-11-21 08:02:18] 2025-11-21 13:01:44,664 | INFO     | sum of deviations: 9899198756207.27
[2025-11-21 08:02:18] 2025-11-21 13:01:44,664 | INFO     | mean x: 1763668082.860305
[2025-11-21 08:02:18] 2025-11-21 13:01:44,664 | INFO     | mean y: 3078526.849483522
[2025-11-21 08:02:18] 2025-11-21 13:01:44,664 | INFO     | intersect: -6699099076.3382435
[2025-11-21 08:02:18] 2025-11-21 13:01:44,667 | INFO     | chi2: 10.180228493068576
[2025-11-21 08:02:18] 2025-11-21 13:01:44,667 | INFO     | current chi2=10.180228493068576 (change=27.881466194779126 %)
[2025-11-21 08:02:18] 2025-11-21 13:01:44,670 | INFO     | sum of square deviations: 2585780146416.883
[2025-11-21 08:02:18] 2025-11-21 13:01:44,681 | INFO     | time since job start (124359s) is within the limit (172800.0s)
[2025-11-21 08:02:18] 2025-11-21 13:01:44,769 | INFO     | sum of deviations: 9161799402808.275
[2025-11-21 08:02:18] 2025-11-21 13:01:44,770 | INFO     | mean x: 1763668235.3703156
[2025-11-21 08:02:18] 2025-11-21 13:01:44,770 | INFO     | mean y: 3084390.6987179485
[2025-11-21 08:02:18] 2025-11-21 13:01:44,770 | INFO     | intersect: -6245851586.305495
[2025-11-21 08:02:18] 2025-11-21 13:01:44,772 | INFO     | chi2: 7.284289006278587
[2025-11-21 08:02:18] 2025-11-21 13:01:44,773 | INFO     | current chi2=7.284289006278587 (change=28.446704204741092 %)
[2025-11-21 08:02:18] 2025-11-21 13:01:44,775 | INFO     | sum of square deviations: 2566694673698.0034
[2025-11-21 08:02:18] 2025-11-21 13:01:44,881 | INFO     | sum of deviations: 8476575941691.832
[2025-11-21 08:02:18] 2025-11-21 13:01:44,881 | INFO     | mean x: 1763668387.8823528
[2025-11-21 08:02:18] 2025-11-21 13:01:44,881 | INFO     | mean y: 3089864.9698467623
[2025-11-21 08:02:18] 2025-11-21 13:01:44,881 | INFO     | intersect: -5821470874.19541
[2025-11-21 08:02:18] 2025-11-21 13:01:44,884 | INFO     | chi2: 4.7529125659744125
[2025-11-21 08:02:18] 2025-11-21 13:01:44,884 | INFO     | current chi2=4.7529125659744125 (change=34.75118076894383 %)
[2025-11-21 08:02:18] 2025-11-21 13:01:44,887 | INFO     | sum of square deviations: 2547707983429.282
[2025-11-21 08:02:18] 2025-11-21 13:01:44,984 | INFO     | sum of deviations: 8237969451488.02
[2025-11-21 08:02:18] 2025-11-21 13:01:44,984 | INFO     | mean x: 1763668540.3756194
[2025-11-21 08:02:18] 2025-11-21 13:01:44,985 | INFO     | mean y: 3091780.386521308
[2025-11-21 08:02:18] 2025-11-21 13:01:44,985 | INFO     | intersect: -5699699768.984195
[2025-11-21 08:02:18] 2025-11-21 13:01:44,987 | INFO     | chi2: 4.4833611938044475
[2025-11-21 08:02:18] 2025-11-21 13:01:44,987 | INFO     | current chi2=4.4833611938044475 (change=5.671288255956024 %)
[2025-11-21 08:02:18] 2025-11-21 13:01:44,988 | INFO     | left removable region: 40
[2025-11-21 08:02:18] 2025-11-21 13:01:44,990 | INFO     | sum of square deviations: 2450491570280.506
[2025-11-21 08:02:18] 2025-11-21 13:01:45,086 | INFO     | sum of deviations: 8248049334773.403
[2025-11-21 08:02:18] 2025-11-21 13:01:45,087 | INFO     | mean x: 1763668967.3423696
[2025-11-21 08:02:18] 2025-11-21 13:01:45,087 | INFO     | mean y: 3103519.329317269
[2025-11-21 08:02:18] 2025-11-21 13:01:45,087 | INFO     | intersect: -5933186500.710851
[2025-11-21 08:02:18] 2025-11-21 13:01:45,090 | INFO     | chi2: 1.320383277776806
[2025-11-21 08:02:18] 2025-11-21 13:01:45,090 | INFO     | current memory leak: 3.37 B/s (using 1992 data points, chi2=1.32)
[2025-11-21 08:02:18] 2025-11-21 13:01:45,091 | INFO     | could have reported an average CPU frequency of 2599 MHz (71 samples)
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | ..............................
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . Timing measurements:
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . get job = 0 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . initial setup = 2 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . payload setup = 10 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . stage-in = 0 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . payload execution = 124321 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . stage-out = 3 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,092 | INFO     | . log creation = 1 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,093 | INFO     | ..............................
[2025-11-21 08:02:18] 2025-11-21 13:01:45,695 | INFO     | 
[2025-11-21 08:02:18] 2025-11-21 13:01:45,695 | INFO     | job summary report
[2025-11-21 08:02:18] 2025-11-21 13:01:45,695 | INFO     | --------------------------------------------------
[2025-11-21 08:02:18] 2025-11-21 13:01:45,695 | INFO     | PanDA job id: 6891599022
[2025-11-21 08:02:18] 2025-11-21 13:01:45,695 | INFO     | task id: 47493068
[2025-11-21 08:02:18] 2025-11-21 13:01:45,696 | INFO     | errors: (none)
[2025-11-21 08:02:18] 2025-11-21 13:01:45,696 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 08:02:18] 2025-11-21 13:01:45,696 | INFO     | pilot state: finished 
[2025-11-21 08:02:18] 2025-11-21 13:01:45,696 | INFO     | transexitcode: 0
[2025-11-21 08:02:18] 2025-11-21 13:01:45,696 | INFO     | exeerrorcode: 0
[2025-11-21 08:02:18] 2025-11-21 13:01:45,696 | INFO     | exeerrordiag: 
[2025-11-21 08:02:18] 2025-11-21 13:01:45,696 | INFO     | exitcode: 0
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | exitmsg: OK
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | cpuconsumptiontime: 313012 s
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | nevents: 1000
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | neventsw: 0
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | pid: 873793
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | pgrp: 873793
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | corecount: 9
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | event service: False
[2025-11-21 08:02:18] 2025-11-21 13:01:45,697 | INFO     | sizes: {0: 2297029, 1: 2297228, 6: 2297490, 11: 2297518, 124335: 2379959, 124339: 2390549, 124340: 2390733, 124344: 2390979}
[2025-11-21 08:02:18] 2025-11-21 13:01:45,698 | INFO     | --------------------------------------------------
[2025-11-21 08:02:18] 2025-11-21 13:01:45,698 | INFO     | 
[2025-11-21 08:02:18] 2025-11-21 13:01:45,698 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 08:02:18] 2025-11-21 13:01:45,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 08:02:18] 2025-11-21 13:01:45,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 08:02:18] 2025-11-21 13:01:45,723 | INFO     | job 6891599022 has completed (purged errors)
[2025-11-21 08:02:18] 2025-11-21 13:01:45,723 | INFO     | overall cleanup function is called
[2025-11-21 08:02:18] 2025-11-21 13:01:46,740 | INFO     | --- collectZombieJob: --- 10, [873793]
[2025-11-21 08:02:18] 2025-11-21 13:01:46,741 | INFO     | zombie collector waiting for pid 873793
[2025-11-21 08:02:18] 2025-11-21 13:01:46,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 08:02:18] 2025-11-21 13:01:46,741 | INFO     | collected zombie processes
[2025-11-21 08:02:18] 2025-11-21 13:01:46,741 | INFO     | will attempt to kill all subprocesses of pid=873793
[2025-11-21 08:02:18] 2025-11-21 13:01:46,982 | INFO     | process IDs to be killed: [873793] (in reverse order)
[2025-11-21 08:02:18] 2025-11-21 13:01:47,050 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 08:02:18] 2025-11-21 13:01:47,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 08:02:18] 2025-11-21 13:01:47,057 | INFO     | did not find any defunct processes belonging to 873793
[2025-11-21 08:02:18] 2025-11-21 13:01:47,064 | INFO     | did not find any defunct processes belonging to 873793
[2025-11-21 08:02:18] 2025-11-21 13:01:47,066 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 08:02:18] 2025-11-21 13:01:47,066 | INFO     | ready for new job
[2025-11-21 08:02:18] 2025-11-21 13:01:47,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 08:02:18] 2025-11-21 13:01:47,073 | INFO     | ***************************************
[2025-11-21 08:02:18] 2025-11-21 13:01:47,073 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 08:02:18] 2025-11-21 13:01:47,074 | INFO     | ***************************************
[2025-11-21 08:02:18] 2025-11-21 13:01:47,074 | INFO     | 
[2025-11-21 08:02:18] 2025-11-21 13:01:47,076 | INFO     | architecture information:
[2025-11-21 08:02:18] 2025-11-21 13:01:47,076 | INFO     | executing command: cat /etc/os-release
[2025-11-21 08:02:18] 2025-11-21 13:01:47,087 | INFO     | cat /etc/os-release:
[2025-11-21 08:02:18] NAME="CentOS Linux"
[2025-11-21 08:02:18] VERSION="7 (Core)"
[2025-11-21 08:02:18] ID="centos"
[2025-11-21 08:02:18] ID_LIKE="rhel fedora"
[2025-11-21 08:02:18] VERSION_ID="7"
[2025-11-21 08:02:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 08:02:18] ANSI_COLOR="0;31"
[2025-11-21 08:02:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 08:02:18] HOME_URL="https://www.centos.org/"
[2025-11-21 08:02:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 08:02:18] 
[2025-11-21 08:02:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 08:02:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 08:02:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 08:02:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 08:02:18] 
[2025-11-21 08:02:18] 2025-11-21 13:01:47,088 | INFO     | ***************************************
[2025-11-21 08:02:18] 2025-11-21 13:01:47,591 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 08:02:18] 2025-11-21 13:01:47,606 | INFO     | sufficient remaining disk space (49360666624 B)
[2025-11-21 08:02:18] 2025-11-21 13:01:47,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 08:02:18] 2025-11-21 13:01:47,607 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 08:02:18] 2025-11-21 13:01:47,607 | INFO     | update_server=False
[2025-11-21 08:02:18] 2025-11-21 13:01:47,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 08:02:18] 2025-11-21 13:01:47,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 08:02:18] 2025-11-21 13:01:47,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:02:18] 2025-11-21 13:01:47,608 | INFO     | aborting loop
[2025-11-21 08:02:18] 2025-11-21 13:01:48,111 | INFO     | all data control threads have been joined
[2025-11-21 08:02:18] 2025-11-21 13:01:48,401 | INFO     | all payload control threads have been joined
[2025-11-21 08:02:18] 2025-11-21 13:01:48,436 | INFO     | all job control threads have been joined
[2025-11-21 08:02:18] 2025-11-21 13:01:48,613 | INFO     | [job] retrieve thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:48,613 | INFO     | [job] job monitor thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:48,712 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:48,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 08:02:18] 2025-11-21 13:01:48,930 | INFO     | [payload] validate_post thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,117 | INFO     | [data] control thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,156 | INFO     | [job] validate thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,264 | INFO     | [data] copytool_in thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,351 | INFO     | [payload] failed_post thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,405 | INFO     | [payload] control thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,442 | INFO     | [job] control thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,609 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,692 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:49,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:50,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:02:18] 2025-11-21 13:01:50,466 | INFO     | [monitor] cgroup control has ended
[2025-11-21 08:02:18] 2025-11-21 13:01:50,777 | INFO     | [data] copytool_out thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:51,219 | INFO     | [job] queue monitor thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:51,614 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 08:02:18] 2025-11-21 13:01:52,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390429087552)>', '<ExcThread(monitor, started 140389629540096)>']
[2025-11-21 08:02:18] 2025-11-21 13:01:57,764 | INFO     | all workflow threads have been joined
[2025-11-21 08:02:18] 2025-11-21 13:01:57,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 08:02:18] 2025-11-21 13:01:57,765 | INFO     | traces error code: 0
[2025-11-21 08:02:18] 2025-11-21 13:01:57,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 08:02:18] 2025-11-21 13:02:18,047 | INFO     | PID=867429 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 08:02:18] 2025-11-21 13:02:18,047 | INFO     | .. there are 6 such processes running
[2025-11-21 08:02:18] 2025-11-21 13:02:18,048 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 08:02:18] 2025-11-21 13:02:18,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 08:02:18] 2025-11-21 13:02:18,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 08:02:18] 2025-11-21 13:02:18,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 08:02:18] 2025-11-21 13:02:18,049 | INFO     | [monitor] control thread has ended
[2025-11-21 08:02:18] 2025-11-21 13:02:18,155 [wrapper] ==== pilot stdout END ====
[2025-11-21 08:02:18] 2025-11-21 13:02:18,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 08:02:18] 2025-11-21 13:02:18,160 [wrapper] pilotpid: 867429
[2025-11-21 08:02:18] 2025-11-21 13:02:18,162 [wrapper] Pilot exit status: 0
[2025-11-21 08:02:18] 2025-11-21 13:02:18,172 [wrapper] pandaids: 6891599022
[2025-11-21 08:02:18] 2025-11-21 13:02:18,230 [wrapper] cleanup supervisor_pilot 3582892 867430
[2025-11-21 08:02:18] 2025-11-21 13:02:18,249 [wrapper] Test setup, not cleaning
[2025-11-21 08:02:18] 2025-11-21 13:02:18,252 [wrapper] apfmon messages muted
[2025-11-21 08:02:18] 2025-11-21 13:02:18,255 [wrapper] ==== wrapper stdout END ====
[2025-11-21 08:02:18] 2025-11-21 13:02:18,257 [wrapper] ==== wrapper stderr END ====
[2025-11-21 08:02:18]  *** Error codes and diagnostics ***
[2025-11-21 08:02:18]     "exeErrorCode": 0,
[2025-11-21 08:02:18]     "exeErrorDiag": "",
[2025-11-21 08:02:18]     "pilotErrorCode": 0,
[2025-11-21 08:02:18]     "pilotErrorDiag": "",
[2025-11-21 08:02:18]  *** Listing of results directory ***
[2025-11-21 08:02:18] total 1332120
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:50 pilot3.tar.gz
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 14:00 queuedata.json
[2025-11-21 08:02:18] -rwx------. 1 boincer umatlas     36292 Nov 18 14:02 runpilot2-wrapper.sh
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas       100 Nov 19 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 08:02:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 21:28 run_atlas
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas       105 Nov 19 21:28 job.xml
[2025-11-21 08:02:18] -rw-r--r--. 2 boincer umatlas 410951430 Nov 19 21:28 EVNT.47493065._000815.pool.root.1
[2025-11-21 08:02:18] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 21:28 start_atlas.sh
[2025-11-21 08:02:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 21:28 shared
[2025-11-21 08:02:18] -rw-r--r--. 2 boincer umatlas    590102 Nov 19 21:28 input.tar.gz
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas         0 Nov 19 21:28 boinc_lockfile
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas      2773 Nov 19 21:28 pandaJob.out
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas    989435 Nov 19 21:29 agis_schedconf.cvmfs.json
[2025-11-21 08:02:18] drwx------. 5 boincer umatlas      4096 Nov 19 21:29 pilot3
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas       533 Nov 21 07:47 boinc_task_state.xml
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas      6661 Nov 21 08:00 init_data.xml
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas 910537752 Nov 21 08:00 HITS.47493068._006799.pool.root.1
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas      1070 Nov 21 08:01 memory_monitor_summary.json
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas   1526164 Nov 21 08:01 agis_ddmendpoints.agis.ALL.json
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas   3040133 Nov 21 08:01 log.47493068._006799.job.log.tgz.1
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas      8655 Nov 21 08:01 heartbeat.json
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 08:02 boinc_mmap_file
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas        29 Nov 21 08:02 wrapper_checkpoint.txt
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas        95 Nov 21 08:02 pilot_heartbeat.json
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas       821 Nov 21 08:02 pilotlog.txt
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas  16299393 Nov 21 08:02 log.47493068._006799.job.log.1
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas       353 Nov 21 08:02 output.list
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas       620 Nov 21 08:02 runtime_log
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas  19363840 Nov 21 08:02 result.tar.gz
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas      8700 Nov 21 08:02 runtime_log.err
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas       667 Nov 21 08:02 gxzLDm28ff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmokFKDm9dilyn.diag
[2025-11-21 08:02:18] -rw-r--r--. 1 boincer umatlas     21129 Nov 21 08:02 stderr.txt
[2025-11-21 08:02:18] HITS file was successfully produced:
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas 910537752 Nov 21 08:00 shared/HITS.pool.root.1
[2025-11-21 08:02:18]  *** Contents of shared directory: ***
[2025-11-21 08:02:18] total 1310032
[2025-11-21 08:02:18] -rw-r--r--. 2 boincer umatlas 410951430 Nov 19 21:28 ATLAS.root_0
[2025-11-21 08:02:18] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 21:28 start_atlas.sh
[2025-11-21 08:02:18] -rw-r--r--. 2 boincer umatlas    590102 Nov 19 21:28 input.tar.gz
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas 910537752 Nov 21 08:00 HITS.pool.root.1
[2025-11-21 08:02:18] -rw-------. 1 boincer umatlas  19363840 Nov 21 08:02 result.tar.gz
08:02:19 (863761): run_atlas exited; CPU time 314181.068470
08:02:19 (863761): called boinc_finish(0)

</stderr_txt>
]]>

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