Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:48 (1404457): wrapper (7.7.26015): starting
00:11:48 (1404457): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 00:11:48] Arguments: --nthreads 12
[2025-11-20 00:11:48] Threads: 12
[2025-11-20 00:11:48] Checking for CVMFS
[2025-11-20 00:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 00:11:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 00:11:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 00:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 00:11:50] 2.13.2.0 5622 21097 161164 153070 1 78 28263366 39288833 9714 16776704 0 12201257 99.614 11393814 36806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 00:11:50] CVMFS is ok
[2025-11-20 00:11:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 00:11:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 00:11:51] Further information can be found at the LHC@home message board.
[2025-11-20 00:11:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 00:11:51] Checking for apptainer binary...
[2025-11-20 00:11:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 00:11:51] Running /usr/bin/apptainer --version
[2025-11-20 00:11:51] apptainer version 1.4.4-1.el9
[2025-11-20 00:11:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 00:11:54] c-210-28.aglt2.org
[2025-11-20 00:11:54] apptainer works
[2025-11-20 00:11:54] Set ATHENA_PROC_NUMBER=12
[2025-11-20 00:11:54] Set ATHENA_CORE_NUMBER=12
[2025-11-20 00:11:54] Starting ATLAS job with PandaID=6891601648
[2025-11-20 00:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:24:42]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:24:42] 2025-11-21 04:24:08,327 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:24:42] 2025-11-21 04:24:08,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:24:42] 2025-11-21 04:24:08,353 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:24:42] 2025-11-21 04:24:08,355 | INFO     | sum of square deviations: 788714591168.6259
[2025-11-20 23:24:42] 2025-11-21 04:24:08,402 | INFO     | sum of deviations: 7514474340601.335
[2025-11-20 23:24:42] 2025-11-21 04:24:08,403 | INFO     | mean x: 1763657427.420513
[2025-11-20 23:24:42] 2025-11-21 04:24:08,403 | INFO     | mean y: 3531158.6805860805
[2025-11-20 23:24:42] 2025-11-21 04:24:08,403 | INFO     | intersect: -16799706200.381971
[2025-11-20 23:24:42] 2025-11-21 04:24:08,405 | INFO     | chi2: 12.47704655064632
[2025-11-20 23:24:42] 2025-11-21 04:24:08,407 | INFO     | sum of square deviations: 780083895008.2648
[2025-11-20 23:24:42] 2025-11-21 04:24:08,453 | INFO     | sum of deviations: 8077629571957.32
[2025-11-20 23:24:42] 2025-11-21 04:24:08,453 | INFO     | mean x: 1763657274.955147
[2025-11-20 23:24:42] 2025-11-21 04:24:08,453 | INFO     | mean y: 3541104.251470588
[2025-11-20 23:24:42] 2025-11-21 04:24:08,453 | INFO     | intersect: -18258815355.273212
[2025-11-20 23:24:42] 2025-11-21 04:24:08,455 | INFO     | chi2: 9.255131978496529
[2025-11-20 23:24:42] 2025-11-21 04:24:08,455 | INFO     | current chi2=9.255131978496529 (change=25.82273424300796 %)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,457 | INFO     | sum of square deviations: 771516373146.5942
[2025-11-20 23:24:42] 2025-11-21 04:24:08,507 | INFO     | sum of deviations: 8260849194520.357
[2025-11-20 23:24:42] 2025-11-21 04:24:08,507 | INFO     | mean x: 1763657122.4892988
[2025-11-20 23:24:42] 2025-11-21 04:24:08,507 | INFO     | mean y: 3544359.6435424355
[2025-11-20 23:24:42] 2025-11-21 04:24:08,507 | INFO     | intersect: -18880443105.593998
[2025-11-20 23:24:42] 2025-11-21 04:24:08,509 | INFO     | chi2: 8.567700036807162
[2025-11-20 23:24:42] 2025-11-21 04:24:08,509 | INFO     | current chi2=8.567700036807162 (change=7.427575784835411 %)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,509 | INFO     | right removable region: 1354
[2025-11-20 23:24:42] 2025-11-21 04:24:08,511 | INFO     | sum of square deviations: 780076134179.1774
[2025-11-20 23:24:42] 2025-11-21 04:24:08,557 | INFO     | sum of deviations: 6862358928926.862
[2025-11-20 23:24:42] 2025-11-21 04:24:08,558 | INFO     | mean x: 1763657579.9544117
[2025-11-20 23:24:42] 2025-11-21 04:24:08,558 | INFO     | mean y: 3542671.2397058825
[2025-11-20 23:24:42] 2025-11-21 04:24:08,558 | INFO     | intersect: -15511419024.268044
[2025-11-20 23:24:42] 2025-11-21 04:24:08,560 | INFO     | chi2: 8.561361526759853
[2025-11-20 23:24:42] 2025-11-21 04:24:08,560 | INFO     | current chi2=8.561361526759853 (change=31.38310823793176 %)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,562 | INFO     | sum of square deviations: 771501182752.497
[2025-11-20 23:24:42] 2025-11-21 04:24:08,608 | INFO     | sum of deviations: 6311904742189.499
[2025-11-20 23:24:42] 2025-11-21 04:24:08,609 | INFO     | mean x: 1763657732.486347
[2025-11-20 23:24:42] 2025-11-21 04:24:08,609 | INFO     | mean y: 3552460.2435424356
[2025-11-20 23:24:42] 2025-11-21 04:24:08,609 | INFO     | intersect: -14425511103.293455
[2025-11-20 23:24:42] 2025-11-21 04:24:08,611 | INFO     | chi2: 5.911177066651952
[2025-11-20 23:24:42] 2025-11-21 04:24:08,611 | INFO     | current chi2=5.911177066651952 (change=30.955175199929847 %)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,613 | INFO     | sum of square deviations: 762989832167.7601
[2025-11-20 23:24:42] 2025-11-21 04:24:08,659 | INFO     | sum of deviations: 5927323562659.292
[2025-11-20 23:24:42] 2025-11-21 04:24:08,659 | INFO     | mean x: 1763657885.0133333
[2025-11-20 23:24:42] 2025-11-21 04:24:08,659 | INFO     | mean y: 3559348.8725925926
[2025-11-20 23:24:42] 2025-11-21 04:24:08,659 | INFO     | intersect: -13697502575.647118
[2025-11-20 23:24:42] 2025-11-21 04:24:08,661 | INFO     | chi2: 4.684960800244196
[2025-11-20 23:24:42] 2025-11-21 04:24:08,661 | INFO     | current chi2=4.684960800244196 (change=20.744028686359016 %)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,661 | INFO     | left removable region: 30
[2025-11-20 23:24:42] 2025-11-21 04:24:08,663 | INFO     | sum of square deviations: 719762011947.4845
[2025-11-20 23:24:42] 2025-11-21 04:24:08,707 | INFO     | sum of deviations: 6203841012420.309
[2025-11-20 23:24:42] 2025-11-21 04:24:08,708 | INFO     | mean x: 1763658007.089124
[2025-11-20 23:24:42] 2025-11-21 04:24:08,708 | INFO     | mean y: 3581249.3617824772
[2025-11-20 23:24:42] 2025-11-21 04:24:08,708 | INFO     | intersect: -15197907151.864494
[2025-11-20 23:24:42] 2025-11-21 04:24:08,710 | INFO     | chi2: 0.4853937184877041
[2025-11-20 23:24:42] 2025-11-21 04:24:08,710 | INFO     | current memory leak: 8.62 B/s (using 1324 data points, chi2=0.49)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,711 | INFO     | could have reported an average CPU frequency of 2601 MHz (49 samples)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | ..............................
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . Timing measurements:
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . get job = 0 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . initial setup = 8 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . payload setup = 66 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . stage-in = 0 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . payload execution = 83257 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . stage-out = 4 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,712 | INFO     | . log creation = 0 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,713 | INFO     | ..............................
[2025-11-20 23:24:42] 2025-11-21 04:24:08,955 | INFO     | 
[2025-11-20 23:24:42] 2025-11-21 04:24:08,955 | INFO     | job summary report
[2025-11-20 23:24:42] 2025-11-21 04:24:08,955 | INFO     | --------------------------------------------------
[2025-11-20 23:24:42] 2025-11-21 04:24:08,955 | INFO     | PanDA job id: 6891601648
[2025-11-20 23:24:42] 2025-11-21 04:24:08,955 | INFO     | task id: 47493068
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | errors: (none)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | pilot state: finished 
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | transexitcode: 0
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | exeerrorcode: 0
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | exeerrordiag: 
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | exitcode: 0
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | exitmsg: OK
[2025-11-20 23:24:42] 2025-11-21 04:24:08,956 | INFO     | cpuconsumptiontime: 290425 s
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | nevents: 1000
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | neventsw: 0
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | pid: 1418201
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | pgrp: 1418201
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | corecount: 12
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | event service: False
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | sizes: {0: 2296372, 1: 2297057, 2: 2297057, 3: 2297284, 4: 2297284, 15: 2297312, 27: 2297468, 38: 2297786, 49: 2297786, 83326: 2361080, 83327: 2361079, 83331: 2372
[2025-11-20 23:24:42] 2025-11-21 04:24:08,957 | INFO     | --------------------------------------------------
[2025-11-20 23:24:42] 2025-11-21 04:24:08,958 | INFO     | 
[2025-11-20 23:24:42] 2025-11-21 04:24:08,958 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-20 23:24:42] 2025-11-21 04:24:08,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,978 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:24:42] 2025-11-21 04:24:08,978 | INFO     | job 6891601648 has completed (purged errors)
[2025-11-20 23:24:42] 2025-11-21 04:24:08,978 | INFO     | overall cleanup function is called
[2025-11-20 23:24:42] 2025-11-21 04:24:09,996 | INFO     | --- collectZombieJob: --- 10, [1418201]
[2025-11-20 23:24:42] 2025-11-21 04:24:09,996 | INFO     | zombie collector waiting for pid 1418201
[2025-11-20 23:24:42] 2025-11-21 04:24:09,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:24:42] 2025-11-21 04:24:09,997 | INFO     | collected zombie processes
[2025-11-20 23:24:42] 2025-11-21 04:24:09,997 | INFO     | will attempt to kill all subprocesses of pid=1418201
[2025-11-20 23:24:42] 2025-11-21 04:24:10,278 | INFO     | process IDs to be killed: [1418201] (in reverse order)
[2025-11-20 23:24:42] 2025-11-21 04:24:10,354 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:24:42] 2025-11-21 04:24:10,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:24:42] 2025-11-21 04:24:10,363 | INFO     | did not find any defunct processes belonging to 1418201
[2025-11-20 23:24:42] 2025-11-21 04:24:10,370 | INFO     | did not find any defunct processes belonging to 1418201
[2025-11-20 23:24:42] 2025-11-21 04:24:10,371 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:24:42] 2025-11-21 04:24:10,371 | INFO     | ready for new job
[2025-11-20 23:24:42] 2025-11-21 04:24:10,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:24:42] 2025-11-21 04:24:10,378 | INFO     | ***************************************
[2025-11-20 23:24:42] 2025-11-21 04:24:10,378 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:24:42] 2025-11-21 04:24:10,378 | INFO     | ***************************************
[2025-11-20 23:24:42] 2025-11-21 04:24:10,378 | INFO     | 
[2025-11-20 23:24:42] 2025-11-21 04:24:10,380 | INFO     | architecture information:
[2025-11-20 23:24:42] 2025-11-21 04:24:10,381 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:24:42] 2025-11-21 04:24:10,394 | INFO     | cat /etc/os-release:
[2025-11-20 23:24:42] NAME="CentOS Linux"
[2025-11-20 23:24:42] VERSION="7 (Core)"
[2025-11-20 23:24:42] ID="centos"
[2025-11-20 23:24:42] ID_LIKE="rhel fedora"
[2025-11-20 23:24:42] VERSION_ID="7"
[2025-11-20 23:24:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:24:42] ANSI_COLOR="0;31"
[2025-11-20 23:24:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:24:42] HOME_URL="https://www.centos.org/"
[2025-11-20 23:24:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:24:42] 
[2025-11-20 23:24:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:24:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:24:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:24:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:24:42] 
[2025-11-20 23:24:42] 2025-11-21 04:24:10,394 | INFO     | ***************************************
[2025-11-20 23:24:42] 2025-11-21 04:24:10,897 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-20 23:24:42] 2025-11-21 04:24:10,908 | INFO     | sufficient remaining disk space (47800385536 B)
[2025-11-20 23:24:42] 2025-11-21 04:24:10,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:24:42] 2025-11-21 04:24:10,908 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:24:42] 2025-11-21 04:24:10,908 | INFO     | update_server=False
[2025-11-20 23:24:42] 2025-11-21 04:24:10,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:24:42] 2025-11-21 04:24:10,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:24:42] 2025-11-21 04:24:10,909 | INFO     | aborting loop
[2025-11-20 23:24:42] 2025-11-21 04:24:11,479 | INFO     | all data control threads have been joined
[2025-11-20 23:24:42] 2025-11-21 04:24:11,605 | INFO     | all payload control threads have been joined
[2025-11-20 23:24:42] 2025-11-21 04:24:11,914 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:11,914 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:24:42] 2025-11-21 04:24:12,417 | INFO     | all job control threads have been joined
[2025-11-20 23:24:42] 2025-11-21 04:24:12,484 | INFO     | [data] control thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,600 | INFO     | [job] validate thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,610 | INFO     | [payload] control thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,717 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,820 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,849 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,960 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:12,962 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:13,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:24:42] 2025-11-21 04:24:13,379 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:13,419 | INFO     | [job] control thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:13,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:24:42] 2025-11-21 04:24:14,113 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:14,118 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:24:42] 2025-11-21 04:24:14,837 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:17,067 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:24:42] 2025-11-21 04:24:17,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733923215168)>', '<ExcThread(monitor, started 139733069985536)>']
[2025-11-20 23:24:42] 2025-11-21 04:24:22,440 | INFO     | all workflow threads have been joined
[2025-11-20 23:24:42] 2025-11-21 04:24:22,440 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:24:42] 2025-11-21 04:24:22,441 | INFO     | traces error code: 0
[2025-11-20 23:24:42] 2025-11-21 04:24:22,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:24:42] 2025-11-21 04:24:41,765 | INFO     | PID=1409484 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 23:24:42] 2025-11-21 04:24:41,766 | INFO     | .. there are 10 such processes running
[2025-11-20 23:24:42] 2025-11-21 04:24:41,767 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:24:42] 2025-11-21 04:24:41,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:24:42] 2025-11-21 04:24:41,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:24:42] 2025-11-21 04:24:41,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:24:42] 2025-11-21 04:24:41,767 | INFO     | [monitor] control thread has ended
[2025-11-20 23:24:42] 2025-11-21 04:24:41,878 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:24:42] 2025-11-21 04:24:41,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:24:42] 2025-11-21 04:24:41,883 [wrapper] pilotpid: 1409484
[2025-11-20 23:24:42] 2025-11-21 04:24:41,885 [wrapper] Pilot exit status: 0
[2025-11-20 23:24:42] 2025-11-21 04:24:41,895 [wrapper] pandaids: 6891601648
[2025-11-20 23:24:42] 2025-11-21 04:24:41,946 [wrapper] cleanup supervisor_pilot 3402004 1409485
[2025-11-20 23:24:42] 2025-11-21 04:24:41,948 [wrapper] Test setup, not cleaning
[2025-11-20 23:24:42] 2025-11-21 04:24:41,951 [wrapper] apfmon messages muted
[2025-11-20 23:24:42] 2025-11-21 04:24:41,953 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:24:42] 2025-11-21 04:24:41,955 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:24:42]  *** Error codes and diagnostics ***
[2025-11-20 23:24:42]     "exeErrorCode": 0,
[2025-11-20 23:24:42]     "exeErrorDiag": "",
[2025-11-20 23:24:42]     "pilotErrorCode": 0,
[2025-11-20 23:24:42]     "pilotErrorDiag": "",
[2025-11-20 23:24:42]  *** Listing of results directory ***
[2025-11-20 23:24:42] total 1321676
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:50 pilot3.tar.gz
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 14:15 queuedata.json
[2025-11-20 23:24:42] -rwx------. 1 boincer umatlas     36292 Nov 18 14:17 runpilot2-wrapper.sh
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas       100 Nov 20 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:24:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 00:11 run_atlas
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas       105 Nov 20 00:11 job.xml
[2025-11-20 23:24:42] -rw-r--r--. 2 boincer umatlas 409682212 Nov 20 00:11 EVNT.47493065._000841.pool.root.1
[2025-11-20 23:24:42] -rw-r--r--. 2 boincer umatlas     15120 Nov 20 00:11 start_atlas.sh
[2025-11-20 23:24:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 00:11 shared
[2025-11-20 23:24:42] -rw-r--r--. 2 boincer umatlas    590091 Nov 20 00:11 input.tar.gz
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas         0 Nov 20 00:11 boinc_lockfile
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas      2773 Nov 20 00:11 pandaJob.out
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas    989427 Nov 20 00:13 agis_schedconf.cvmfs.json
[2025-11-20 23:24:42] drwx------. 5 boincer umatlas      4096 Nov 20 00:13 pilot3
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas       533 Nov 20 23:14 boinc_task_state.xml
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas      6663 Nov 20 23:20 init_data.xml
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas 913473855 Nov 20 23:23 HITS.47493068._007052.pool.root.1
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas      1055 Nov 20 23:23 memory_monitor_summary.json
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas   1526164 Nov 20 23:24 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas   2820449 Nov 20 23:24 log.47493068._007052.job.log.tgz.1
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas      8626 Nov 20 23:24 heartbeat.json
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 23:24 boinc_mmap_file
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas        29 Nov 20 23:24 wrapper_checkpoint.txt
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas        95 Nov 20 23:24 pilot_heartbeat.json
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas       823 Nov 20 23:24 pilotlog.txt
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas  10335011 Nov 20 23:24 log.47493068._007052.job.log.1
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas       353 Nov 20 23:24 output.list
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas       620 Nov 20 23:24 runtime_log
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas  13178880 Nov 20 23:24 result.tar.gz
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas       660 Nov 20 23:24 sGJKDmsNgf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKRGKDm9wRhKo.diag
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas      8706 Nov 20 23:24 runtime_log.err
[2025-11-20 23:24:42] -rw-r--r--. 1 boincer umatlas     21171 Nov 20 23:24 stderr.txt
[2025-11-20 23:24:42] HITS file was successfully produced:
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas 913473855 Nov 20 23:23 shared/HITS.pool.root.1
[2025-11-20 23:24:42]  *** Contents of shared directory: ***
[2025-11-20 23:24:42] total 1305628
[2025-11-20 23:24:42] -rw-r--r--. 2 boincer umatlas 409682212 Nov 20 00:11 ATLAS.root_0
[2025-11-20 23:24:42] -rw-r--r--. 2 boincer umatlas     15120 Nov 20 00:11 start_atlas.sh
[2025-11-20 23:24:42] -rw-r--r--. 2 boincer umatlas    590091 Nov 20 00:11 input.tar.gz
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas 913473855 Nov 20 23:23 HITS.pool.root.1
[2025-11-20 23:24:42] -rw-------. 1 boincer umatlas  13178880 Nov 20 23:24 result.tar.gz
23:24:43 (1404457): run_atlas exited; CPU time 291142.364648
23:24:43 (1404457): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN