Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:06:54 (2410434): wrapper (7.7.26015): starting
22:06:54 (2410434): wrapper: running run_atlas (--nthreads 9)
[2025-11-19 22:06:54] Arguments: --nthreads 9
[2025-11-19 22:06:54] Threads: 9
[2025-11-19 22:06:54] Checking for CVMFS
[2025-11-19 22:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 22:06:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 22:06:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 22:06:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 22:06:54] 2.13.2.0 7693 24568 176752 153066 3 67 38130832 39288833 8500 16776704 0 17413198 99.566 17243826 28390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 22:06:54] CVMFS is ok
[2025-11-19 22:06:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 22:06:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 22:06:54] Further information can be found at the LHC@home message board.
[2025-11-19 22:06:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 22:06:54] Checking for apptainer binary...
[2025-11-19 22:06:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 22:06:54] Running /usr/bin/apptainer --version
[2025-11-19 22:06:54] apptainer version 1.4.4-1.el9
[2025-11-19 22:06:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 22:06:55] c-210-18.aglt2.org
[2025-11-19 22:06:55] apptainer works
[2025-11-19 22:07:15] Set ATHENA_PROC_NUMBER=9
[2025-11-19 22:07:15] Set ATHENA_CORE_NUMBER=9
[2025-11-19 22:07:15] Starting ATLAS job with PandaID=6891596306
[2025-11-19 22:07:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 05:25:21]  *** The last 200 lines of the pilot log: ***
[2025-11-21 05:25:21] 2025-11-21 10:24:45,642 | INFO     | job 6891596306 has finished - writing final server update
[2025-11-21 05:25:21] 2025-11-21 10:24:45,642 | INFO     | total number of processed events: 1000 (read)
[2025-11-21 05:25:21] 2025-11-21 10:24:45,643 | INFO     | executing command: lscpu
[2025-11-21 05:25:21] 2025-11-21 10:24:45,683 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-21 05:25:21] 2025-11-21 10:24:46,071 | INFO     | time since job start (112636s) is within the limit (172800.0s)
[2025-11-21 05:25:21] 2025-11-21 10:24:47,012 | WARNING  | process 2420597 can no longer be monitored (due to stat problems) - aborting
[2025-11-21 05:25:21] 2025-11-21 10:24:47,013 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891596306/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:25:21] 2025-11-21 10:24:47,222 | INFO     | number of running child processes to parent process 2420597: 1
[2025-11-21 05:25:21] 2025-11-21 10:24:47,222 | INFO     | maximum number of monitored processes: 17
[2025-11-21 05:25:21] 2025-11-21 10:24:48,076 | INFO     | time since job start (112638s) is within the limit (172800.0s)
[2025-11-21 05:25:21] 2025-11-21 10:24:48,728 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 05:25:21] 2025-11-21 10:24:48,735 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2679.96135
[2025-11-21 05:25:21] 2025-11-21 10:24:48,741 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891596306/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:25:21] 2025-11-21 10:24:48,742 | INFO     | extracted standard info from prmon json
[2025-11-21 05:25:21] 2025-11-21 10:24:48,742 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 05:25:21] 2025-11-21 10:24:48,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 05:25:21] 2025-11-21 10:24:48,775 | INFO     | fitting pss+swap vs Time
[2025-11-21 05:25:21] 2025-11-21 10:24:48,777 | INFO     | sum of square deviations: 1950581891008.6526
[2025-11-21 05:25:21] 2025-11-21 10:24:48,857 | INFO     | sum of deviations: 9479916356232.291
[2025-11-21 05:25:21] 2025-11-21 10:24:48,857 | INFO     | mean x: 1763664360.7242687
[2025-11-21 05:25:21] 2025-11-21 10:24:48,858 | INFO     | mean y: 2988061.022210184
[2025-11-21 05:25:21] 2025-11-21 10:24:48,858 | INFO     | intersect: -8568500630.225871
[2025-11-21 05:25:21] 2025-11-21 10:24:48,860 | INFO     | chi2: 10.373623180629929
[2025-11-21 05:25:21] 2025-11-21 10:24:48,863 | INFO     | sum of square deviations: 1934776461099.0317
[2025-11-21 05:25:21] 2025-11-21 10:24:48,945 | INFO     | sum of deviations: 10000044055730.062
[2025-11-21 05:25:21] 2025-11-21 10:24:48,945 | INFO     | mean x: 1763664208.2330256
[2025-11-21 05:25:21] 2025-11-21 10:24:48,945 | INFO     | mean y: 2993077.689842477
[2025-11-21 05:25:21] 2025-11-21 10:24:48,946 | INFO     | intersect: -9112643863.554605
[2025-11-21 05:25:21] 2025-11-21 10:24:48,948 | INFO     | chi2: 8.120331166487933
[2025-11-21 05:25:21] 2025-11-21 10:24:48,948 | INFO     | current chi2=8.120331166487933 (change=21.721359788250634 %)
[2025-11-21 05:25:21] 2025-11-21 10:24:48,948 | INFO     | right removable region: 1840
[2025-11-21 05:25:21] 2025-11-21 10:24:48,951 | INFO     | sum of square deviations: 1934772830379.0332
[2025-11-21 05:25:21] 2025-11-21 10:24:49,033 | INFO     | sum of deviations: 8790828099797.081
[2025-11-21 05:25:21] 2025-11-21 10:24:49,033 | INFO     | mean x: 1763664513.2330256
[2025-11-21 05:25:21] 2025-11-21 10:24:49,033 | INFO     | mean y: 2994707.834329169
[2025-11-21 05:25:21] 2025-11-21 10:24:49,033 | INFO     | intersect: -8010386149.135056
[2025-11-21 05:25:21] 2025-11-21 10:24:49,036 | INFO     | chi2: 7.066762904939827
[2025-11-21 05:25:21] 2025-11-21 10:24:49,036 | INFO     | current chi2=7.066762904939827 (change=31.877582384762277 %)
[2025-11-21 05:25:21] 2025-11-21 10:24:49,038 | INFO     | sum of square deviations: 1919049399261.6267
[2025-11-21 05:25:21] 2025-11-21 10:24:49,119 | INFO     | sum of deviations: 8273991729512.416
[2025-11-21 05:25:21] 2025-11-21 10:24:49,120 | INFO     | mean x: 1763664665.74183
[2025-11-21 05:25:21] 2025-11-21 10:24:49,120 | INFO     | mean y: 2999720.443899782
[2025-11-21 05:25:21] 2025-11-21 10:24:49,120 | INFO     | intersect: -7601049900.996698
[2025-11-21 05:25:21] 2025-11-21 10:24:49,122 | INFO     | chi2: 5.376368805687971
[2025-11-21 05:25:21] 2025-11-21 10:24:49,122 | INFO     | current chi2=5.376368805687971 (change=23.920345453647982 %)
[2025-11-21 05:25:21] 2025-11-21 10:24:49,123 | INFO     | left removable region: 20
[2025-11-21 05:25:21] 2025-11-21 10:24:49,125 | INFO     | sum of square deviations: 1869311720645.0764
[2025-11-21 05:25:21] 2025-11-21 10:24:49,204 | INFO     | sum of deviations: 8247989794981.854
[2025-11-21 05:25:21] 2025-11-21 10:24:49,205 | INFO     | mean x: 1763664787.7692308
[2025-11-21 05:25:21] 2025-11-21 10:24:49,205 | INFO     | mean y: 3011546.3972527473
[2025-11-21 05:25:21] 2025-11-21 10:24:49,205 | INFO     | intersect: -7778830834.749091
[2025-11-21 05:25:21] 2025-11-21 10:24:49,207 | INFO     | chi2: 1.5907672831622477
[2025-11-21 05:25:21] 2025-11-21 10:24:49,208 | INFO     | current memory leak: 4.41 B/s (using 1820 data points, chi2=1.59)
[2025-11-21 05:25:21] 2025-11-21 10:24:49,209 | INFO     | could have reported an average CPU frequency of 2603 MHz (65 samples)
[2025-11-21 05:25:21] 2025-11-21 10:24:49,209 | INFO     | ..............................
[2025-11-21 05:25:21] 2025-11-21 10:24:49,209 | INFO     | . Timing measurements:
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | . get job = 0 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | . initial setup = 3 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | . payload setup = 9 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | . stage-in = 0 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | . payload execution = 112599 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | . stage-out = 3 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | . log creation = 1 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,210 | INFO     | ..............................
[2025-11-21 05:25:21] 2025-11-21 10:24:49,703 | INFO     | 
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | job summary report
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | --------------------------------------------------
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | PanDA job id: 6891596306
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | task id: 47493068
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | errors: (none)
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | pilot state: finished 
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | transexitcode: 0
[2025-11-21 05:25:21] 2025-11-21 10:24:49,704 | INFO     | exeerrorcode: 0
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | exeerrordiag: 
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | exitcode: 0
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | exitmsg: OK
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | cpuconsumptiontime: 295067 s
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | nevents: 1000
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | neventsw: 0
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | pid: 2420597
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | pgrp: 2420597
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | corecount: 9
[2025-11-21 05:25:21] 2025-11-21 10:24:49,705 | INFO     | event service: False
[2025-11-21 05:25:21] 2025-11-21 10:24:49,706 | INFO     | sizes: {0: 2296973, 1: 2297228, 8: 2297490, 12: 2297518, 112613: 2373773, 112617: 2384547, 112621: 2384833}
[2025-11-21 05:25:21] 2025-11-21 10:24:49,706 | INFO     | --------------------------------------------------
[2025-11-21 05:25:21] 2025-11-21 10:24:49,706 | INFO     | 
[2025-11-21 05:25:21] 2025-11-21 10:24:49,706 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 05:25:21] 2025-11-21 10:24:49,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 05:25:21] 2025-11-21 10:24:49,725 | INFO     | job 6891596306 has completed (purged errors)
[2025-11-21 05:25:21] 2025-11-21 10:24:49,726 | INFO     | overall cleanup function is called
[2025-11-21 05:25:21] 2025-11-21 10:24:50,742 | INFO     | --- collectZombieJob: --- 10, [2420597]
[2025-11-21 05:25:21] 2025-11-21 10:24:50,742 | INFO     | zombie collector waiting for pid 2420597
[2025-11-21 05:25:21] 2025-11-21 10:24:50,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 05:25:21] 2025-11-21 10:24:50,743 | INFO     | collected zombie processes
[2025-11-21 05:25:21] 2025-11-21 10:24:50,743 | INFO     | will attempt to kill all subprocesses of pid=2420597
[2025-11-21 05:25:21] 2025-11-21 10:24:50,973 | INFO     | process IDs to be killed: [2420597] (in reverse order)
[2025-11-21 05:25:21] 2025-11-21 10:24:51,040 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 05:25:21] 2025-11-21 10:24:51,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 05:25:21] 2025-11-21 10:24:51,047 | INFO     | did not find any defunct processes belonging to 2420597
[2025-11-21 05:25:21] 2025-11-21 10:24:51,053 | INFO     | did not find any defunct processes belonging to 2420597
[2025-11-21 05:25:21] 2025-11-21 10:24:51,055 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 05:25:21] 2025-11-21 10:24:51,055 | INFO     | ready for new job
[2025-11-21 05:25:21] 2025-11-21 10:24:51,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 05:25:21] 2025-11-21 10:24:51,064 | INFO     | ***************************************
[2025-11-21 05:25:21] 2025-11-21 10:24:51,064 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 05:25:21] 2025-11-21 10:24:51,064 | INFO     | ***************************************
[2025-11-21 05:25:21] 2025-11-21 10:24:51,064 | INFO     | 
[2025-11-21 05:25:21] 2025-11-21 10:24:51,066 | INFO     | architecture information:
[2025-11-21 05:25:21] 2025-11-21 10:24:51,067 | INFO     | executing command: cat /etc/os-release
[2025-11-21 05:25:21] 2025-11-21 10:24:51,081 | INFO     | cat /etc/os-release:
[2025-11-21 05:25:21] NAME="CentOS Linux"
[2025-11-21 05:25:21] VERSION="7 (Core)"
[2025-11-21 05:25:21] ID="centos"
[2025-11-21 05:25:21] ID_LIKE="rhel fedora"
[2025-11-21 05:25:21] VERSION_ID="7"
[2025-11-21 05:25:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 05:25:21] ANSI_COLOR="0;31"
[2025-11-21 05:25:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 05:25:21] HOME_URL="https://www.centos.org/"
[2025-11-21 05:25:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 05:25:21] 
[2025-11-21 05:25:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 05:25:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 05:25:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 05:25:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 05:25:21] 
[2025-11-21 05:25:21] 2025-11-21 10:24:51,082 | INFO     | ***************************************
[2025-11-21 05:25:21] 2025-11-21 10:24:51,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 05:25:21] 2025-11-21 10:24:51,605 | INFO     | sufficient remaining disk space (47046459392 B)
[2025-11-21 05:25:21] 2025-11-21 10:24:51,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 05:25:21] 2025-11-21 10:24:51,606 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 05:25:21] 2025-11-21 10:24:51,606 | INFO     | update_server=False
[2025-11-21 05:25:21] 2025-11-21 10:24:51,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 05:25:21] 2025-11-21 10:24:51,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:25:21] 2025-11-21 10:24:51,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 05:25:21] 2025-11-21 10:24:51,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 05:25:21] 2025-11-21 10:24:51,607 | INFO     | aborting loop
[2025-11-21 05:25:21] 2025-11-21 10:24:51,802 | INFO     | all job control threads have been joined
[2025-11-21 05:25:21] 2025-11-21 10:24:52,610 | INFO     | [job] job monitor thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:52,611 | INFO     | [job] retrieve thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:52,695 | INFO     | all data control threads have been joined
[2025-11-21 05:25:21] 2025-11-21 10:24:52,808 | INFO     | [job] control thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:52,909 | INFO     | [job] validate thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:52,910 | INFO     | all payload control threads have been joined
[2025-11-21 05:25:21] 2025-11-21 10:24:53,170 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:53,412 | INFO     | [payload] validate_post thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:53,613 | INFO     | [data] copytool_out thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:53,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:53,699 | INFO     | [data] control thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:53,915 | INFO     | [payload] control thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:53,946 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:53,983 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:54,019 | INFO     | [data] copytool_in thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:54,169 | INFO     | [payload] failed_post thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:54,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:25:21] 2025-11-21 10:24:55,333 | INFO     | [job] queue monitor thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:55,612 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 05:25:21] 2025-11-21 10:24:55,840 | INFO     | [monitor] cgroup control has ended
[2025-11-21 05:25:21] 2025-11-21 10:24:57,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513316042560)>', '<ExcThread(monitor, started 140512967239424)>']
[2025-11-21 05:25:21] 2025-11-21 10:25:02,320 | INFO     | all workflow threads have been joined
[2025-11-21 05:25:21] 2025-11-21 10:25:02,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 05:25:21] 2025-11-21 10:25:02,320 | INFO     | traces error code: 0
[2025-11-21 05:25:21] 2025-11-21 10:25:02,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 05:25:21] 2025-11-21 10:25:21,440 | INFO     | PID=2414152 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 05:25:21] 2025-11-21 10:25:21,441 | INFO     | .. there are 5 such processes running
[2025-11-21 05:25:21] 2025-11-21 10:25:21,442 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 05:25:21] 2025-11-21 10:25:21,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 05:25:21] 2025-11-21 10:25:21,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 05:25:21] 2025-11-21 10:25:21,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 05:25:21] 2025-11-21 10:25:21,442 | INFO     | [monitor] control thread has ended
[2025-11-21 05:25:21] 2025-11-21 10:25:21,555 [wrapper] ==== pilot stdout END ====
[2025-11-21 05:25:21] 2025-11-21 10:25:21,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 05:25:21] 2025-11-21 10:25:21,561 [wrapper] pilotpid: 2414152
[2025-11-21 05:25:21] 2025-11-21 10:25:21,563 [wrapper] Pilot exit status: 0
[2025-11-21 05:25:21] 2025-11-21 10:25:21,572 [wrapper] pandaids: 6891596306
[2025-11-21 05:25:21] 2025-11-21 10:25:21,614 [wrapper] cleanup supervisor_pilot  669124 2414153
[2025-11-21 05:25:21] 2025-11-21 10:25:21,617 [wrapper] Test setup, not cleaning
[2025-11-21 05:25:21] 2025-11-21 10:25:21,619 [wrapper] apfmon messages muted
[2025-11-21 05:25:21] 2025-11-21 10:25:21,622 [wrapper] ==== wrapper stdout END ====
[2025-11-21 05:25:21] 2025-11-21 10:25:21,624 [wrapper] ==== wrapper stderr END ====
[2025-11-21 05:25:21]  *** Error codes and diagnostics ***
[2025-11-21 05:25:21]     "exeErrorCode": 0,
[2025-11-21 05:25:21]     "exeErrorDiag": "",
[2025-11-21 05:25:21]     "pilotErrorCode": 0,
[2025-11-21 05:25:21]     "pilotErrorDiag": "",
[2025-11-21 05:25:21]  *** Listing of results directory ***
[2025-11-21 05:25:21] total 1330300
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:36 pilot3.tar.gz
[2025-11-21 05:25:21] -rwx------. 1 boincer umatlas     36292 Nov 18 13:48 runpilot2-wrapper.sh
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:48 queuedata.json
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas       100 Nov 19 22:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 05:25:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 22:06 run_atlas
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas       105 Nov 19 22:06 job.xml
[2025-11-21 05:25:21] -rw-r--r--. 2 boincer umatlas 410520120 Nov 19 22:06 EVNT.47493065._000776.pool.root.1
[2025-11-21 05:25:21] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 22:06 start_atlas.sh
[2025-11-21 05:25:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 22:06 shared
[2025-11-21 05:25:21] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 22:06 input.tar.gz
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas         0 Nov 19 22:06 boinc_lockfile
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas      2773 Nov 19 22:06 pandaJob.out
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas    989435 Nov 19 22:07 agis_schedconf.cvmfs.json
[2025-11-21 05:25:21] drwx------. 5 boincer umatlas      4096 Nov 19 22:07 pilot3
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas       534 Nov 21 05:11 boinc_task_state.xml
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas      6661 Nov 21 05:21 init_data.xml
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas 913148437 Nov 21 05:24 HITS.47493068._006408.pool.root.1
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas      1058 Nov 21 05:24 memory_monitor_summary.json
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas   1526164 Nov 21 05:24 agis_ddmendpoints.agis.ALL.json
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas   2875569 Nov 21 05:24 log.47493068._006408.job.log.tgz.1
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas      8624 Nov 21 05:24 heartbeat.json
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 05:25 boinc_mmap_file
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas        30 Nov 21 05:25 wrapper_checkpoint.txt
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas        95 Nov 21 05:25 pilot_heartbeat.json
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas       822 Nov 21 05:25 pilotlog.txt
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas  14443336 Nov 21 05:25 log.47493068._006408.job.log.1
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas       353 Nov 21 05:25 output.list
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas       620 Nov 21 05:25 runtime_log
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas  17336320 Nov 21 05:25 result.tar.gz
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas      8705 Nov 21 05:25 runtime_log.err
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas       663 Nov 21 05:25 1kLODm9vff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmniFKDmsxDK2m.diag
[2025-11-21 05:25:21] -rw-r--r--. 1 boincer umatlas     21567 Nov 21 05:25 stderr.txt
[2025-11-21 05:25:21] HITS file was successfully produced:
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas 913148437 Nov 21 05:24 shared/HITS.pool.root.1
[2025-11-21 05:25:21]  *** Contents of shared directory: ***
[2025-11-21 05:25:21] total 1310184
[2025-11-21 05:25:21] -rw-r--r--. 2 boincer umatlas 410520120 Nov 19 22:06 ATLAS.root_0
[2025-11-21 05:25:21] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 22:06 start_atlas.sh
[2025-11-21 05:25:21] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 22:06 input.tar.gz
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas 913148437 Nov 21 05:24 HITS.pool.root.1
[2025-11-21 05:25:21] -rw-------. 1 boincer umatlas  17336320 Nov 21 05:25 result.tar.gz
05:25:22 (2410434): run_atlas exited; CPU time 296289.209260
05:25:22 (2410434): called boinc_finish(0)

</stderr_txt>
]]>

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