Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:55:27 (1040586): wrapper (7.7.26015): starting
06:55:27 (1040586): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 06:55:27] Arguments: --nthreads 4
[2025-11-23 06:55:27] Threads: 4
[2025-11-23 06:55:27] Checking for CVMFS
[2025-11-23 06:55:27] No cvmfs_config command found, will try listing directly
[2025-11-23 06:55:27] CVMFS is ok
[2025-11-23 06:55:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 06:55:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 06:55:27] Further information can be found at the LHC@home message board.
[2025-11-23 06:55:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 06:55:27] Checking for apptainer binary...
[2025-11-23 06:55:27] which: no apptainer in ((null))
[2025-11-23 06:55:27] apptainer is not installed, using version from CVMFS
[2025-11-23 06:55:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 06:55:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-11-23 06:55:27] apptainer works
[2025-11-23 06:55:27] Set ATHENA_PROC_NUMBER=4
[2025-11-23 06:55:27] Set ATHENA_CORE_NUMBER=4
[2025-11-23 06:55:27] Starting ATLAS job with PandaID=6891522040
[2025-11-23 06:55:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:43:17]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:43:17] 2025-11-23 22:29:41,153 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2510.0317187499995
[2025-11-23 23:43:17] 2025-11-23 22:29:41,166 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6891522040/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,167 | INFO     | extracted standard info from prmon json
[2025-11-23 23:43:17] 2025-11-23 22:29:41,167 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:43:17] 2025-11-23 22:29:41,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:43:17] 2025-11-23 22:29:41,185 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:43:17] 2025-11-23 22:29:41,187 | INFO     | sum of square deviations: 290064469304.5
[2025-11-23 23:43:17] 2025-11-23 22:29:41,209 | INFO     | sum of deviations: 1020129751976.9998
[2025-11-23 23:43:17] 2025-11-23 22:29:41,209 | INFO     | mean x: 1763907164.5
[2025-11-23 23:43:17] 2025-11-23 22:29:41,209 | INFO     | mean y: 2297316.2576687117
[2025-11-23 23:43:17] 2025-11-23 22:29:41,209 | INFO     | intersect: -6201200073.637655
[2025-11-23 23:43:17] 2025-11-23 22:29:41,211 | INFO     | chi2: 4.15231569995281
[2025-11-23 23:43:17] 2025-11-23 22:29:41,212 | INFO     | sum of square deviations: 285638330502.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,233 | INFO     | sum of deviations: 1236800081553.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,233 | INFO     | mean x: 1763907012.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,233 | INFO     | mean y: 2304775.929085303
[2025-11-23 23:43:17] 2025-11-23 22:29:41,234 | INFO     | intersect: -7635326813.84886
[2025-11-23 23:43:17] 2025-11-23 22:29:41,235 | INFO     | chi2: 1.7752700980987752
[2025-11-23 23:43:17] 2025-11-23 22:29:41,235 | INFO     | current chi2=1.7752700980987752 (change=57.24626385900883 %)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,237 | INFO     | sum of square deviations: 281257448362.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,242 | INFO     | monitor loop #4297: job 0:6891522040 is in state 'finished'
[2025-11-23 23:43:17] 2025-11-23 22:29:41,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,258 | INFO     | sum of deviations: 1226798096657.5
[2025-11-23 23:43:17] 2025-11-23 22:29:41,259 | INFO     | mean x: 1763906859.5
[2025-11-23 23:43:17] 2025-11-23 22:29:41,259 | INFO     | mean y: 2304426.9080578513
[2025-11-23 23:43:17] 2025-11-23 22:29:41,259 | INFO     | intersect: -7691563204.040966
[2025-11-23 23:43:17] 2025-11-23 22:29:41,260 | INFO     | chi2: 1.7675525947843287
[2025-11-23 23:43:17] 2025-11-23 22:29:41,260 | INFO     | current chi2=1.7675525947843287 (change=0.4347227682543403 %)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,261 | INFO     | right removable region: 967
[2025-11-23 23:43:17] 2025-11-23 22:29:41,262 | INFO     | sum of square deviations: 285638330502.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,283 | INFO     | sum of deviations: 847963548275.0001
[2025-11-23 23:43:17] 2025-11-23 22:29:41,283 | INFO     | mean x: 1763907317.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,283 | INFO     | mean y: 2303237.7225077082
[2025-11-23 23:43:17] 2025-11-23 22:29:41,283 | INFO     | intersect: -5234140711.249119
[2025-11-23 23:43:17] 2025-11-23 22:29:41,285 | INFO     | chi2: 2.480065780887297
[2025-11-23 23:43:17] 2025-11-23 22:29:41,285 | INFO     | current chi2=2.480065780887297 (change=40.272706602836536 %)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,286 | INFO     | sum of square deviations: 281257448362.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,307 | INFO     | sum of deviations: 830773779141.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,307 | INFO     | mean x: 1763907469.5
[2025-11-23 23:43:17] 2025-11-23 22:29:41,307 | INFO     | mean y: 2303835.458677686
[2025-11-23 23:43:17] 2025-11-23 22:29:41,307 | INFO     | intersect: -5207898002.842366
[2025-11-23 23:43:17] 2025-11-23 22:29:41,309 | INFO     | chi2: 2.4779275779041727
[2025-11-23 23:43:17] 2025-11-23 22:29:41,309 | INFO     | current chi2=2.4779275779041727 (change=0.08621557539328945 %)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,309 | INFO     | left removable region: 20
[2025-11-23 23:43:17] 2025-11-23 22:29:41,310 | INFO     | sum of square deviations: 263346697658.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,330 | INFO     | sum of deviations: 1026458028190.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,330 | INFO     | mean x: 1763907439.0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,330 | INFO     | mean y: 2311270.8352692714
[2025-11-23 23:43:17] 2025-11-23 22:29:41,331 | INFO     | intersect: -6872948483.122047
[2025-11-23 23:43:17] 2025-11-23 22:29:41,332 | INFO     | chi2: 0.06501294814546836
[2025-11-23 23:43:17] 2025-11-23 22:29:41,332 | INFO     | current memory leak: 3.90 B/s (using 947 data points, chi2=0.07)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,333 | INFO     | could have reported an average CPU frequency of 2619 MHz (36 samples)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | ..............................
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . Timing measurements:
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . get job = 0 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . initial setup = 1 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . payload setup = 6 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . stage-in = 0 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . payload execution = 59603 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . stage-out = 2 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | . log creation = 0 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,334 | INFO     | ..............................
[2025-11-23 23:43:17] 2025-11-23 22:29:41,440 | INFO     | 
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | job summary report
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | --------------------------------------------------
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | PanDA job id: 6891522040
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | task id: 47493068
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | errors: (none)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | pilot state: finished 
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | transexitcode: 0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | exeerrorcode: 0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | exeerrordiag: 
[2025-11-23 23:43:17] 2025-11-23 22:29:41,441 | INFO     | exitcode: 0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | exitmsg: OK
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | cpuconsumptiontime: 236910 s
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | nevents: 1000
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | neventsw: 0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | pid: 1051819
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | pgrp: 1051819
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | corecount: 4
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | event service: False
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | sizes: {0: 2297960, 1: 2298827, 6: 2299089, 12: 2299117, 59614: 2349855, 59618: 2358871, 59619: 2359055, 59628: 2359301}
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | --------------------------------------------------
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | 
[2025-11-23 23:43:17] 2025-11-23 22:29:41,442 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-23 23:43:17] 2025-11-23 22:29:41,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:43:17] 2025-11-23 22:29:41,467 | INFO     | job 6891522040 has completed (purged errors)
[2025-11-23 23:43:17] 2025-11-23 22:29:41,468 | INFO     | overall cleanup function is called
[2025-11-23 23:43:17] 2025-11-23 22:29:42,482 | INFO     | --- collectZombieJob: --- 10, [1051819]
[2025-11-23 23:43:17] 2025-11-23 22:29:42,482 | INFO     | zombie collector waiting for pid 1051819
[2025-11-23 23:43:17] 2025-11-23 22:29:42,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:43:17] 2025-11-23 22:29:42,482 | INFO     | collected zombie processes
[2025-11-23 23:43:17] 2025-11-23 22:29:42,482 | INFO     | will attempt to kill all subprocesses of pid=1051819
[2025-11-23 23:43:17] 2025-11-23 22:29:42,862 | INFO     | process IDs to be killed: [1051819] (in reverse order)
[2025-11-23 23:43:17] 2025-11-23 22:29:42,976 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:43:17] 2025-11-23 22:29:42,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:43:17] 2025-11-23 22:29:42,989 | INFO     | did not find any defunct processes belonging to 1051819
[2025-11-23 23:43:17] 2025-11-23 22:29:43,001 | INFO     | did not find any defunct processes belonging to 1051819
[2025-11-23 23:43:17] 2025-11-23 22:29:43,002 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:43:17] 2025-11-23 22:29:43,002 | INFO     | ready for new job
[2025-11-23 23:43:17] 2025-11-23 22:29:43,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:43:17] 2025-11-23 22:29:43,008 | INFO     | ***************************************
[2025-11-23 23:43:17] 2025-11-23 22:29:43,009 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:43:17] 2025-11-23 22:29:43,009 | INFO     | ***************************************
[2025-11-23 23:43:17] 2025-11-23 22:29:43,009 | INFO     | 
[2025-11-23 23:43:17] 2025-11-23 22:29:43,013 | INFO     | architecture information:
[2025-11-23 23:43:17] 2025-11-23 22:29:43,014 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:43:17] 2025-11-23 22:29:43,030 | INFO     | cat /etc/os-release:
[2025-11-23 23:43:17] NAME="CentOS Linux"
[2025-11-23 23:43:17] VERSION="7 (Core)"
[2025-11-23 23:43:17] ID="centos"
[2025-11-23 23:43:17] ID_LIKE="rhel fedora"
[2025-11-23 23:43:17] VERSION_ID="7"
[2025-11-23 23:43:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:43:17] ANSI_COLOR="0;31"
[2025-11-23 23:43:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:43:17] HOME_URL="https://www.centos.org/"
[2025-11-23 23:43:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:43:17] 
[2025-11-23 23:43:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:43:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:43:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:43:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:43:17] 
[2025-11-23 23:43:17] 2025-11-23 22:29:43,031 | INFO     | ***************************************
[2025-11-23 23:43:17] 2025-11-23 22:29:43,534 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-23 23:43:17] 2025-11-23 22:29:43,550 | INFO     | sufficient remaining disk space (684813451264 B)
[2025-11-23 23:43:17] 2025-11-23 22:29:43,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:43:17] 2025-11-23 22:29:43,551 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:43:17] 2025-11-23 22:29:43,551 | INFO     | update_server=False
[2025-11-23 23:43:17] 2025-11-23 22:29:43,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:43:17] 2025-11-23 22:29:43,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:43:17] 2025-11-23 22:29:43,761 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 23:43:17] 2025-11-23 22:29:43,762 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 23:43:17] 2025-11-23 22:29:43,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:43:17] 2025-11-23 22:29:43,762 | INFO     | will abort loop
[2025-11-23 23:43:17] 2025-11-23 22:29:43,772 | INFO     | all job control threads have been joined
[2025-11-23 23:43:17] 2025-11-23 22:29:44,063 | INFO     | all payload control threads have been joined
[2025-11-23 23:43:17] 2025-11-23 22:29:44,557 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:44,604 | INFO     | all data control threads have been joined
[2025-11-23 23:43:17] 2025-11-23 22:29:44,767 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:44,777 | INFO     | [job] control thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:44,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:43:17] 2025-11-23 22:29:44,946 | INFO     | [job] validate thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:44,949 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,051 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,068 | INFO     | [payload] control thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,347 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,446 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,463 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,606 | INFO     | [data] control thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,835 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:45,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:46,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:43:17] 2025-11-23 22:29:46,939 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:47,452 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:29:47,557 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:43:17] 2025-11-23 22:30:11,318 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:43:17] 2025-11-23 22:30:11,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23114955106112)>', '<ExcThread(monitor, started 23114714937088)>']
[2025-11-23 23:43:17] 2025-11-23 22:30:13,615 | INFO     | PID=1044364 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:43:17] 2025-11-23 22:30:13,615 | INFO     | .. there are 4 such processes running
[2025-11-23 23:43:17] 2025-11-23 22:30:13,616 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:43:17] 2025-11-23 22:30:13,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:43:17] 2025-11-23 22:30:13,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:43:17] 2025-11-23 22:30:13,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:43:17] 2025-11-23 22:30:13,617 | INFO     | [monitor] control thread has ended
[2025-11-23 23:43:17] 2025-11-23 22:30:16,578 | INFO     | all workflow threads have been joined
[2025-11-23 23:43:17] 2025-11-23 22:30:16,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:43:17] 2025-11-23 22:30:16,579 | INFO     | traces error code: 0
[2025-11-23 23:43:17] 2025-11-23 22:30:16,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:43:17] 2025-11-23 22:30:16,743 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:43:17] 2025-11-23 22:30:16,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:43:17] 2025-11-23 22:30:16,749 [wrapper] pilotpid: 1044364
[2025-11-23 23:43:17] 2025-11-23 22:30:16,753 [wrapper] Pilot exit status: 0
[2025-11-23 23:43:17] 2025-11-23 22:30:16,765 [wrapper] pandaids: 6891522040
[2025-11-23 23:43:17] 2025-11-23 22:30:16,846 [wrapper] cleanup supervisor_pilot 1831925 1044365
[2025-11-23 23:43:17] 2025-11-23 22:30:16,849 [wrapper] Test setup, not cleaning
[2025-11-23 23:43:17] 2025-11-23 22:30:16,852 [wrapper] apfmon messages muted
[2025-11-23 23:43:17] 2025-11-23 22:30:16,856 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:43:17] 2025-11-23 22:30:16,858 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:43:17]  *** Error codes and diagnostics ***
[2025-11-23 23:43:17]     "exeErrorCode": 0,
[2025-11-23 23:43:17]     "exeErrorDiag": "",
[2025-11-23 23:43:17]     "pilotErrorCode": 0,
[2025-11-23 23:43:17]     "pilotErrorDiag": "",
[2025-11-23 23:43:17]  *** Listing of results directory ***
[2025-11-23 23:43:17] total 1320828
[2025-11-23 23:43:17] -rwx------ 1 boinc boinc     36292 Nov 18 15:12 runpilot2-wrapper.sh
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc      5112 Nov 18 15:12 queuedata.json
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc    576529 Nov 18 15:12 pilot3.tar.gz
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc       100 Nov 23 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:43:17] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 06:55 run_atlas
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc       105 Nov 23 06:55 job.xml
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc      6636 Nov 23 06:55 init_data.xml
[2025-11-23 23:43:17] -rw-r--r-- 2 boinc boinc 408749397 Nov 23 06:55 EVNT.47493065._000006.pool.root.1
[2025-11-23 23:43:17] -rw-r--r-- 2 boinc boinc    590081 Nov 23 06:55 input.tar.gz
[2025-11-23 23:43:17] -rw-r--r-- 2 boinc boinc     15120 Nov 23 06:55 start_atlas.sh
[2025-11-23 23:43:17] drwxrwx--x 2 boinc boinc      4096 Nov 23 06:55 shared
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc         0 Nov 23 06:55 boinc_lockfile
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc      2769 Nov 23 06:55 pandaJob.out
[2025-11-23 23:43:17] -rw------- 1 boinc boinc    989784 Nov 23 06:55 agis_schedconf.cvmfs.json
[2025-11-23 23:43:17] drwx------ 5 boinc boinc      4096 Nov 23 06:55 pilot3
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc       531 Nov 23 23:24 boinc_task_state.xml
[2025-11-23 23:43:17] -rw------- 1 boinc boinc 919740569 Nov 23 23:28 HITS.47493068._000097.pool.root.1
[2025-11-23 23:43:17] -rw------- 1 boinc boinc      1044 Nov 23 23:29 memory_monitor_summary.json
[2025-11-23 23:43:17] -rw------- 1 boinc boinc   1526164 Nov 23 23:29 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:43:17] -rw------- 1 boinc boinc   1708224 Nov 23 23:29 log.47493068._000097.job.log.tgz.1
[2025-11-23 23:43:17] -rw------- 1 boinc boinc      7955 Nov 23 23:29 heartbeat.json
[2025-11-23 23:43:17] -rw------- 1 boinc boinc        95 Nov 23 23:30 pilot_heartbeat.json
[2025-11-23 23:43:17] -rw------- 1 boinc boinc      5019 Nov 23 23:30 pilotlog.txt
[2025-11-23 23:43:17] -rw------- 1 boinc boinc   8350635 Nov 23 23:30 log.47493068._000097.job.log.1
[2025-11-23 23:43:17] -rw------- 1 boinc boinc       353 Nov 23 23:30 output.list
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc       620 Nov 23 23:30 runtime_log
[2025-11-23 23:43:17] -rw------- 1 boinc boinc  10076160 Nov 23 23:30 result.tar.gz
[2025-11-23 23:43:17] -rw------- 1 boinc boinc       670 Nov 23 23:30 zJnLDm1cbf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9CFKDm7gMVWo.diag
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc      9070 Nov 23 23:30 runtime_log.err
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc        28 Nov 23 23:43 wrapper_checkpoint.txt
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc      8192 Nov 23 23:43 boinc_mmap_file
[2025-11-23 23:43:17] -rw-r--r-- 1 boinc boinc     21073 Nov 23 23:43 stderr.txt
[2025-11-23 23:43:17] HITS file was successfully produced:
[2025-11-23 23:43:17] -rw------- 1 boinc boinc 919740569 Nov 23 23:28 shared/HITS.pool.root.1
[2025-11-23 23:43:17]  *** Contents of shared directory: ***
[2025-11-23 23:43:17] total 1307804
[2025-11-23 23:43:17] -rw-r--r-- 2 boinc boinc 408749397 Nov 23 06:55 ATLAS.root_0
[2025-11-23 23:43:17] -rw-r--r-- 2 boinc boinc    590081 Nov 23 06:55 input.tar.gz
[2025-11-23 23:43:17] -rw-r--r-- 2 boinc boinc     15120 Nov 23 06:55 start_atlas.sh
[2025-11-23 23:43:17] -rw------- 1 boinc boinc 919740569 Nov 23 23:28 HITS.pool.root.1
[2025-11-23 23:43:17] -rw------- 1 boinc boinc  10076160 Nov 23 23:30 result.tar.gz
23:43:19 (1040586): run_atlas exited; CPU time 239165.014421
23:43:19 (1040586): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN