Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:28:39 (600917): wrapper (7.7.26015): starting
16:28:39 (600917): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 16:28:39] Arguments: --nthreads 4
[2025-11-20 16:28:39] Threads: 4
[2025-11-20 16:28:39] Checking for CVMFS
[2025-11-20 16:28:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 16:28:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 16:28:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 16:28:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 16:28:39] 2.9.2.0 172553 2884 77192 153084 3 81 27183851 36864001 0 130560 0 1193896 99.808 407673 12275 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 16:28:39] CVMFS is ok
[2025-11-20 16:28:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 16:28:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 16:28:39] Further information can be found at the LHC@home message board.
[2025-11-20 16:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 16:28:39] Checking for apptainer binary...
[2025-11-20 16:28:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 16:28:39] Running /usr/bin/apptainer --version
[2025-11-20 16:28:39] apptainer version 1.4.1-1.1
[2025-11-20 16:28:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 16:28:39] belleA263a
[2025-11-20 16:28:39] apptainer works
[2025-11-20 16:28:39] Set ATHENA_PROC_NUMBER=4
[2025-11-20 16:28:39] Set ATHENA_CORE_NUMBER=4
[2025-11-20 16:28:39] Starting ATLAS job with PandaID=6891586415
[2025-11-20 16:28:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 23:25:22]  *** The last 200 lines of the pilot log: ***
[2025-11-20 23:25:22] 2025-11-20 22:24:21,401 | INFO     | time since job start (24934s) is within the limit (172800.0s)
[2025-11-20 23:25:22] 2025-11-20 22:24:22,541 | INFO     | monitor loop #1897: job 0:6891586415 is in state 'finished'
[2025-11-20 23:25:22] 2025-11-20 22:24:22,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 23:25:22] 2025-11-20 22:24:23,407 | INFO     | time since job start (24936s) is within the limit (172800.0s)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,053 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 23:25:22] 2025-11-20 22:24:24,055 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3370.7723124999993
[2025-11-20 23:25:22] 2025-11-20 22:24:24,056 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891586415/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,057 | INFO     | extracted standard info from prmon json
[2025-11-20 23:25:22] 2025-11-20 22:24:24,057 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 23:25:22] 2025-11-20 22:24:24,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 23:25:22] 2025-11-20 22:24:24,059 | INFO     | fitting pss+swap vs Time
[2025-11-20 23:25:22] 2025-11-20 22:24:24,060 | INFO     | sum of square deviations: 21215132660.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,061 | INFO     | sum of deviations: 268348352885.99994
[2025-11-20 23:25:22] 2025-11-20 22:24:24,061 | INFO     | mean x: 1763664994.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,061 | INFO     | mean y: 2415230.293398533
[2025-11-20 23:25:22] 2025-11-20 22:24:24,061 | INFO     | intersect: -22306028641.70438
[2025-11-20 23:25:22] 2025-11-20 22:24:24,062 | INFO     | chi2: 4.847292170951551
[2025-11-20 23:25:22] 2025-11-20 22:24:24,062 | INFO     | sum of square deviations: 20446541505.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,063 | INFO     | sum of deviations: 349903672549.5
[2025-11-20 23:25:22] 2025-11-20 22:24:24,063 | INFO     | mean x: 1763664841.5
[2025-11-20 23:25:22] 2025-11-20 22:24:24,063 | INFO     | mean y: 2431360.7648514854
[2025-11-20 23:25:22] 2025-11-20 22:24:24,063 | INFO     | intersect: -30179338257.161633
[2025-11-20 23:25:22] 2025-11-20 22:24:24,064 | INFO     | chi2: 2.861840674572062
[2025-11-20 23:25:22] 2025-11-20 22:24:24,064 | INFO     | current chi2=2.861840674572062 (change=40.96001285579065 %)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,064 | INFO     | sum of square deviations: 19696741400.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,065 | INFO     | sum of deviations: 343351607741.00006
[2025-11-20 23:25:22] 2025-11-20 22:24:24,065 | INFO     | mean x: 1763664689.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,065 | INFO     | mean y: 2430028.1578947366
[2025-11-20 23:25:22] 2025-11-20 22:24:24,065 | INFO     | intersect: -30741594792.322353
[2025-11-20 23:25:22] 2025-11-20 22:24:24,066 | INFO     | chi2: 2.8571402390984884
[2025-11-20 23:25:22] 2025-11-20 22:24:24,066 | INFO     | current chi2=2.8571402390984884 (change=0.16424518371473149 %)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,066 | INFO     | right removable region: 398
[2025-11-20 23:25:22] 2025-11-20 22:24:24,066 | INFO     | sum of square deviations: 20446541505.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,067 | INFO     | sum of deviations: 167897102262.50003
[2025-11-20 23:25:22] 2025-11-20 22:24:24,067 | INFO     | mean x: 1763665146.5
[2025-11-20 23:25:22] 2025-11-20 22:24:24,067 | INFO     | mean y: 2435131.2103960398
[2025-11-20 23:25:22] 2025-11-20 22:24:24,068 | INFO     | intersect: -14479929399.060202
[2025-11-20 23:25:22] 2025-11-20 22:24:24,068 | INFO     | chi2: 2.5595048216213434
[2025-11-20 23:25:22] 2025-11-20 22:24:24,068 | INFO     | current chi2=2.5595048216213434 (change=47.19722411288243 %)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,068 | INFO     | sum of square deviations: 19696741400.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,069 | INFO     | sum of deviations: 128935245855.00002
[2025-11-20 23:25:22] 2025-11-20 22:24:24,069 | INFO     | mean x: 1763665299.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,069 | INFO     | mean y: 2443021.4010025063
[2025-11-20 23:25:22] 2025-11-20 22:24:24,069 | INFO     | intersect: -11542543751.512466
[2025-11-20 23:25:22] 2025-11-20 22:24:24,070 | INFO     | chi2: 2.14466273439955
[2025-11-20 23:25:22] 2025-11-20 22:24:24,070 | INFO     | current chi2=2.14466273439955 (change=16.207904111663588 %)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,070 | INFO     | left removable region: 20
[2025-11-20 23:25:22] 2025-11-20 22:24:24,070 | INFO     | sum of square deviations: 16747530754.5
[2025-11-20 23:25:22] 2025-11-20 22:24:24,071 | INFO     | sum of deviations: 178785140889.0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,071 | INFO     | mean x: 1763665268.5
[2025-11-20 23:25:22] 2025-11-20 22:24:24,071 | INFO     | mean y: 2464497.7671957673
[2025-11-20 23:25:22] 2025-11-20 22:24:24,071 | INFO     | intersect: -18825215124.50094
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | chi2: 0.12137705654354178
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | current memory leak: 10.68 B/s (using 378 data points, chi2=0.12)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | could have reported an average CPU frequency of 3899 MHz (17 samples)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | ..............................
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . Timing measurements:
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . get job = 0 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . initial setup = 1 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . payload setup = 4 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . stage-in = 0 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . payload execution = 24903 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . stage-out = 1 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | . log creation = 0 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,072 | INFO     | ..............................
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | 
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | job summary report
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | --------------------------------------------------
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | PanDA job id: 6891586415
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | task id: 47493068
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | errors: (none)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | pilot state: finished 
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | transexitcode: 0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | exeerrorcode: 0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | exeerrordiag: 
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | exitcode: 0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | exitmsg: OK
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | cpuconsumptiontime: 97475 s
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | nevents: 1000
[2025-11-20 23:25:22] 2025-11-20 22:24:24,112 | INFO     | neventsw: 0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | pid: 611281
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | pgrp: 611281
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | corecount: 4
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | event service: False
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | sizes: {0: 2298799, 4: 2299061, 11: 2299089, 24911: 2336087, 24912: 2336086, 24914: 2345142, 24918: 2345326, 24923: 2345636}
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | --------------------------------------------------
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | 
[2025-11-20 23:25:22] 2025-11-20 22:24:24,113 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | job 6891586415 has completed (purged errors)
[2025-11-20 23:25:22] 2025-11-20 22:24:24,132 | INFO     | overall cleanup function is called
[2025-11-20 23:25:22] 2025-11-20 22:24:25,141 | INFO     | --- collectZombieJob: --- 10, [611281]
[2025-11-20 23:25:22] 2025-11-20 22:24:25,142 | INFO     | zombie collector waiting for pid 611281
[2025-11-20 23:25:22] 2025-11-20 22:24:25,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 23:25:22] 2025-11-20 22:24:25,142 | INFO     | collected zombie processes
[2025-11-20 23:25:22] 2025-11-20 22:24:25,142 | INFO     | will attempt to kill all subprocesses of pid=611281
[2025-11-20 23:25:22] 2025-11-20 22:24:25,186 | INFO     | process IDs to be killed: [611281] (in reverse order)
[2025-11-20 23:25:22] 2025-11-20 22:24:25,219 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 23:25:22] 2025-11-20 22:24:25,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 23:25:22] 2025-11-20 22:24:25,221 | INFO     | did not find any defunct processes belonging to 611281
[2025-11-20 23:25:22] 2025-11-20 22:24:25,222 | INFO     | did not find any defunct processes belonging to 611281
[2025-11-20 23:25:22] 2025-11-20 22:24:25,223 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 23:25:22] 2025-11-20 22:24:25,223 | INFO     | ready for new job
[2025-11-20 23:25:22] 2025-11-20 22:24:25,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 23:25:22] 2025-11-20 22:24:25,224 | INFO     | ***************************************
[2025-11-20 23:25:22] 2025-11-20 22:24:25,224 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 23:25:22] 2025-11-20 22:24:25,224 | INFO     | ***************************************
[2025-11-20 23:25:22] 2025-11-20 22:24:25,225 | INFO     | 
[2025-11-20 23:25:22] 2025-11-20 22:24:25,225 | INFO     | architecture information:
[2025-11-20 23:25:22] 2025-11-20 22:24:25,225 | INFO     | executing command: cat /etc/os-release
[2025-11-20 23:25:22] 2025-11-20 22:24:25,240 | INFO     | cat /etc/os-release:
[2025-11-20 23:25:22] NAME="CentOS Linux"
[2025-11-20 23:25:22] VERSION="7 (Core)"
[2025-11-20 23:25:22] ID="centos"
[2025-11-20 23:25:22] ID_LIKE="rhel fedora"
[2025-11-20 23:25:22] VERSION_ID="7"
[2025-11-20 23:25:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 23:25:22] ANSI_COLOR="0;31"
[2025-11-20 23:25:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 23:25:22] HOME_URL="https://www.centos.org/"
[2025-11-20 23:25:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 23:25:22] 
[2025-11-20 23:25:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 23:25:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 23:25:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 23:25:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 23:25:22] 
[2025-11-20 23:25:22] 2025-11-20 22:24:25,240 | INFO     | ***************************************
[2025-11-20 23:25:22] 2025-11-20 22:24:25,743 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-20 23:25:22] 2025-11-20 22:24:25,762 | INFO     | sufficient remaining disk space (329220358144 B)
[2025-11-20 23:25:22] 2025-11-20 22:24:25,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 23:25:22] 2025-11-20 22:24:25,762 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 23:25:22] 2025-11-20 22:24:25,762 | INFO     | update_server=False
[2025-11-20 23:25:22] 2025-11-20 22:24:25,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 23:25:22] 2025-11-20 22:24:25,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 23:25:22] 2025-11-20 22:24:25,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:25:22] 2025-11-20 22:24:25,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 23:25:22] 2025-11-20 22:24:26,030 | INFO     | all payload control threads have been joined
[2025-11-20 23:25:22] 2025-11-20 22:24:26,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 23:25:22] 2025-11-20 22:24:26,051 | INFO     | aborting loop
[2025-11-20 23:25:22] 2025-11-20 22:24:26,442 | INFO     | all job control threads have been joined
[2025-11-20 23:25:22] 2025-11-20 22:24:26,714 | INFO     | all data control threads have been joined
[2025-11-20 23:25:22] 2025-11-20 22:24:26,768 | INFO     | [job] retrieve thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:26,768 | INFO     | [job] queue monitor thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:26,769 | INFO     | [payload] failed_post thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:26,900 | INFO     | [data] copytool_in thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,036 | INFO     | [payload] control thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,056 | INFO     | [job] job monitor thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,058 | INFO     | [payload] validate_post thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,359 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,388 | INFO     | [job] validate thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,448 | INFO     | [job] control thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,478 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,490 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,720 | INFO     | [data] control thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:27,965 | INFO     | [data] copytool_out thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:29,769 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 23:25:22] 2025-11-20 22:24:56,538 | INFO     | PID=604706 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 23:25:22] 2025-11-20 22:24:56,538 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 23:25:22] 2025-11-20 22:24:56,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 23:25:22] 2025-11-20 22:24:56,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 23:25:22] 2025-11-20 22:25:17,162 | INFO     | [monitor] cgroup control has ended
[2025-11-20 23:25:22] 2025-11-20 22:25:17,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087878387520)>', '<ExcThread(monitor, started 140086834345728)>']
[2025-11-20 23:25:22] 2025-11-20 22:25:17,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 23:25:22] 2025-11-20 22:25:17,653 | INFO     | [monitor] control thread has ended
[2025-11-20 23:25:22] 2025-11-20 22:25:22,439 | INFO     | all workflow threads have been joined
[2025-11-20 23:25:22] 2025-11-20 22:25:22,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 23:25:22] 2025-11-20 22:25:22,440 | INFO     | traces error code: 0
[2025-11-20 23:25:22] 2025-11-20 22:25:22,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 23:25:22] 2025-11-20 22:25:22,590 [wrapper] ==== pilot stdout END ====
[2025-11-20 23:25:22] 2025-11-20 22:25:22,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 23:25:22] 2025-11-20 22:25:22,598 [wrapper] pilotpid: 604706
[2025-11-20 23:25:22] 2025-11-20 22:25:22,602 [wrapper] Pilot exit status: 0
[2025-11-20 23:25:22] 2025-11-20 22:25:22,613 [wrapper] pandaids: 6891586415
[2025-11-20 23:25:22] 2025-11-20 22:25:22,638 [wrapper] cleanup supervisor_pilot  656182 604707
[2025-11-20 23:25:22] 2025-11-20 22:25:22,641 [wrapper] Test setup, not cleaning
[2025-11-20 23:25:22] 2025-11-20 22:25:22,646 [wrapper] apfmon messages muted
[2025-11-20 23:25:22] 2025-11-20 22:25:22,650 [wrapper] ==== wrapper stdout END ====
[2025-11-20 23:25:22] 2025-11-20 22:25:22,653 [wrapper] ==== wrapper stderr END ====
[2025-11-20 23:25:22]  *** Error codes and diagnostics ***
[2025-11-20 23:25:22]     "exeErrorCode": 0,
[2025-11-20 23:25:22]     "exeErrorDiag": "",
[2025-11-20 23:25:22]     "pilotErrorCode": 0,
[2025-11-20 23:25:22]     "pilotErrorDiag": "",
[2025-11-20 23:25:22]  *** Listing of results directory ***
[2025-11-20 23:25:22] total 1326232
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-20 23:25:22] -rwx------ 1 boinc boinc     36292 Nov 18 18:31 runpilot2-wrapper.sh
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:31 queuedata.json
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc       100 Nov 20 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 23:25:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 16:28 run_atlas
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc       105 Nov 20 16:28 job.xml
[2025-11-20 23:25:22] -rw-r--r-- 2 boinc boinc 411445138 Nov 20 16:28 EVNT.47493065._000489.pool.root.1
[2025-11-20 23:25:22] -rw-r--r-- 2 boinc boinc    590094 Nov 20 16:28 input.tar.gz
[2025-11-20 23:25:22] -rw-r--r-- 2 boinc boinc     15120 Nov 20 16:28 start_atlas.sh
[2025-11-20 23:25:22] drwxrwx--x 2 boinc boinc      4096 Nov 20 16:28 shared
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc         0 Nov 20 16:28 boinc_setup_complete
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc      6379 Nov 20 16:28 init_data.xml
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc         0 Nov 20 16:28 boinc_lockfile
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc      2773 Nov 20 16:28 pandaJob.out
[2025-11-20 23:25:22] -rw------- 1 boinc boinc    989440 Nov 20 16:28 agis_schedconf.cvmfs.json
[2025-11-20 23:25:22] drwx------ 5 boinc boinc      4096 Nov 20 16:28 pilot3
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc       532 Nov 20 23:19 boinc_task_state.xml
[2025-11-20 23:25:22] -rw------- 1 boinc boinc 933164435 Nov 20 23:23 HITS.47493068._004887.pool.root.1
[2025-11-20 23:25:22] -rw------- 1 boinc boinc        95 Nov 20 23:23 pilot_heartbeat.json
[2025-11-20 23:25:22] -rw------- 1 boinc boinc      1029 Nov 20 23:24 memory_monitor_summary.json
[2025-11-20 23:25:22] -rw------- 1 boinc boinc   1526164 Nov 20 23:24 agis_ddmendpoints.agis.ALL.json
[2025-11-20 23:25:22] -rw------- 1 boinc boinc   1255382 Nov 20 23:24 log.47493068._004887.job.log.tgz.1
[2025-11-20 23:25:22] -rw------- 1 boinc boinc      8583 Nov 20 23:24 heartbeat.json
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc      8192 Nov 20 23:25 boinc_mmap_file
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc        28 Nov 20 23:25 wrapper_checkpoint.txt
[2025-11-20 23:25:22] -rw------- 1 boinc boinc      4751 Nov 20 23:25 pilotlog.txt
[2025-11-20 23:25:22] -rw------- 1 boinc boinc   3512232 Nov 20 23:25 log.47493068._004887.job.log.1
[2025-11-20 23:25:22] -rw------- 1 boinc boinc       353 Nov 20 23:25 output.list
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc       620 Nov 20 23:25 runtime_log
[2025-11-20 23:25:22] -rw------- 1 boinc boinc   4782080 Nov 20 23:25 result.tar.gz
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc      8798 Nov 20 23:25 runtime_log.err
[2025-11-20 23:25:22] -rw------- 1 boinc boinc       669 Nov 20 23:25 V80LDm5ief8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMaFKDmw1QUUn.diag
[2025-11-20 23:25:22] -rw-r--r-- 1 boinc boinc     21274 Nov 20 23:25 stderr.txt
[2025-11-20 23:25:22] HITS file was successfully produced:
[2025-11-20 23:25:22] -rw------- 1 boinc boinc 933164435 Nov 20 23:23 shared/HITS.pool.root.1
[2025-11-20 23:25:22]  *** Contents of shared directory: ***
[2025-11-20 23:25:22] total 1318372
[2025-11-20 23:25:22] -rw-r--r-- 2 boinc boinc 411445138 Nov 20 16:28 ATLAS.root_0
[2025-11-20 23:25:22] -rw-r--r-- 2 boinc boinc    590094 Nov 20 16:28 input.tar.gz
[2025-11-20 23:25:22] -rw-r--r-- 2 boinc boinc     15120 Nov 20 16:28 start_atlas.sh
[2025-11-20 23:25:22] -rw------- 1 boinc boinc 933164435 Nov 20 23:23 HITS.pool.root.1
[2025-11-20 23:25:22] -rw------- 1 boinc boinc   4782080 Nov 20 23:25 result.tar.gz
23:25:24 (600917): run_atlas exited; CPU time 97447.789487
23:25:24 (600917): called boinc_finish(0)

</stderr_txt>
]]>

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