Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 14:08:20 (168532): vboxwrapper version 26210
2025-11-22 14:08:20 (168532): BOINC client version: 8.0.2
2025-11-22 14:08:20 (168532): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-11-22 14:08:20 (168532): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 14:08:21 (168532): Create VM. (boinc_23a2bf9bcfa19cb7, slot#6)
2025-11-22 14:08:21 (168532): Setting Memory Size for VM. (4800MB)
2025-11-22 14:08:21 (168532): Setting CPU Count for VM. (8)
2025-11-22 14:08:22 (168532): Setting Chipset Options for VM.
2025-11-22 14:08:22 (168532): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 14:08:22 (168532): Setting Boot Options for VM.
2025-11-22 14:08:23 (168532): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 14:08:23 (168532): Enabling VM Network Access.
2025-11-22 14:08:23 (168532): Disabling USB Support for VM.
2025-11-22 14:08:23 (168532): Disabling COM Port Support for VM.
2025-11-22 14:08:24 (168532): Disabling LPT Port Support for VM.
2025-11-22 14:08:24 (168532): Disabling Audio Support for VM.
2025-11-22 14:08:24 (168532): Disabling Clipboard Support for VM.
2025-11-22 14:08:25 (168532): Disabling Drag and Drop Support for VM.
2025-11-22 14:08:25 (168532): Adding storage controller(s) to VM.
2025-11-22 14:08:25 (168532): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 14:08:26 (168532): Adding VirtualBox Guest Additions to VM.
2025-11-22 14:08:26 (168532): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 14:08:26 (168532): forwarding host port 57226 to guest port 80
2025-11-22 14:08:26 (168532): Enabling remote desktop for VM.
2025-11-22 14:08:27 (168532): Required extension pack not installed, remote desktop not enabled.
2025-11-22 14:08:27 (168532): Enabling shared directory for VM.
2025-11-22 14:08:27 (168532): Starting VM using VBoxManage interface. (boinc_23a2bf9bcfa19cb7, slot#6)
2025-11-22 14:08:33 (168532): Successfully started VM. (PID = '61732')
2025-11-22 14:08:33 (168532): Reporting VM Process ID to BOINC.
2025-11-22 14:08:33 (168532): Guest Log: BIOS: VirtualBox 7.0.18
2025-11-22 14:08:33 (168532): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 14:08:33 (168532): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 14:08:33 (168532): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 14:08:33 (168532): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 14:08:33 (168532): Detected: Web Application Enabled (http://localhost:57226)
2025-11-22 14:08:33 (168532): Preference change detected
2025-11-22 14:08:33 (168532): Setting CPU throttle for VM. (100%)
2025-11-22 14:08:34 (168532): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 660 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 14:08:36 (168532): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 14:08:36 (168532): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 14:08:39 (168532): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 14:08:39 (168532): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 14:08:39 (168532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 14:08:46 (168532): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 14:08:46 (168532): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 14:08:54 (168532): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.000305 main     Log opened 2025-11-22T14:08:52.109515000Z
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.000441 main     OS Product: Linux
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.000487 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.000530 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.000574 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.000575 main     Process ID: 1372
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.000577 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 14:08:54 (168532): Guest Log: 00:00:00.002168 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 14:08:54 (168532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 14:08:54 (168532): Guest Log: [INFO] Mounting shared directory
2025-11-22 14:08:55 (168532): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 14:09:00 (168532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 14:09:00 (168532): Guest Log: [INFO] Detected branch: prod
2025-11-22 14:09:00 (168532): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 14:09:00 (168532): Guest Log: Copying input files
2025-11-22 14:09:03 (168532): Guest Log: Copied input files into RunAtlas.
2025-11-22 14:09:03 (168532): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 14:09:03 (168532): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 14:09:03 (168532): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 14:09:03 (168532): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 14:09:04 (168532): Guest Log: 00:00:10.004791 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 230 734 000ns (GuestNow=1 763 816 943 882 613 000 ns GuestLast=1 763 820 532 113 347 000 ns fSetTimeLastLoop=true )
2025-11-22 14:09:12 (168532): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 14:09:13 (168532): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 14:09:13 (168532): Guest Log: 2.6.3.0 1650 0 30152 153172 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 14:09:13 (168532): Guest Log: copied the webapp to /var/www
2025-11-22 14:09:13 (168532): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-22 14:09:13 (168532): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-22 14:09:14 (168532): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 14:09:14 (168532): Guest Log:  *** Starting ATLAS job. (PandaID=6891585317 taskID=47493068) ***
2025-11-22 15:48:52 (168532): Status Report: Elapsed Time: '6000.000000'
2025-11-22 15:48:52 (168532): Status Report: CPU Time: '39558.921875'
2025-11-22 17:29:16 (168532): Status Report: Elapsed Time: '12000.000000'
2025-11-22 17:29:16 (168532): Status Report: CPU Time: '83353.812500'
2025-11-22 19:09:41 (168532): Status Report: Elapsed Time: '18000.000000'
2025-11-22 19:09:41 (168532): Status Report: CPU Time: '126702.562500'
2025-11-22 20:50:06 (168532): Status Report: Elapsed Time: '24000.000000'
2025-11-22 20:50:06 (168532): Status Report: CPU Time: '170299.515625'
2025-11-22 22:30:29 (168532): Status Report: Elapsed Time: '30000.000000'
2025-11-22 22:30:29 (168532): Status Report: CPU Time: '213969.671875'
2025-11-23 00:10:45 (168532): Status Report: Elapsed Time: '36000.000000'
2025-11-23 00:10:45 (168532): Status Report: CPU Time: '256452.421875'
2025-11-23 00:13:13 (168532): VM state change detected. (old = 'running', new = 'paused')
2025-11-23 07:13:27 (168532): VM state change detected. (old = 'paused', new = 'running')
2025-11-23 07:13:29 (168532): Guest Log: 10:04:20.964312 timesync vgsvcTimeSyncWorker: Radical host time change: 25 223 804 000 000ns (HostNow=1 763 878 408 633 000 000 ns HostLast=1 763 853 184 829 000 000 ns)
2025-11-23 07:13:39 (168532): Guest Log: 10:04:30.965226 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 223 817 143 000ns (GuestNow=1 763 878 418 646 401 000 ns GuestLast=1 763 853 194 829 258 000 ns fSetTimeLastLoop=true )
2025-11-23 08:51:24 (168532): Status Report: Elapsed Time: '42000.000000'
2025-11-23 08:51:24 (168532): Status Report: CPU Time: '299808.781250'
2025-11-23 10:31:52 (168532): Status Report: Elapsed Time: '48000.000000'
2025-11-23 10:31:52 (168532): Status Report: CPU Time: '343841.843750'
2025-11-23 11:50:08 (168532): VM state change detected. (old = 'running', new = 'paused')
2025-11-24 11:13:09 (168532): VM state change detected. (old = 'paused', new = 'running')
2025-11-24 11:13:14 (168532): Guest Log: 14:41:05.787633 timesync vgsvcTimeSyncWorker: Radical host time change: 84 190 640 000 000ns (HostNow=1 763 979 194 106 000 000 ns HostLast=1 763 895 003 466 000 000 ns)
2025-11-24 11:13:24 (168532): Guest Log: 14:41:15.788475 timesync vgsvcTimeSyncWorker: Radical guest time change: 84 190 639 784 000ns (GuestNow=1 763 979 204 107 407 000 ns GuestLast=1 763 895 013 467 623 000 ns fSetTimeLastLoop=true )
2025-11-24 11:35:14 (168532): Status Report: Elapsed Time: '54000.000000'
2025-11-24 11:35:14 (168532): Status Report: CPU Time: '388633.062500'
2025-11-24 13:15:22 (168532): Status Report: Elapsed Time: '60000.000000'
2025-11-24 13:15:22 (168532): Status Report: CPU Time: '432502.265625'
2025-11-24 14:10:51 (168532): Guest Log:  *** Job finished ***
2025-11-24 14:10:51 (168532): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:39,736 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140251711022912)>', '<ExcThread(queue_monitor, started 140251133630208)>']
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:39,736 | INFO     | [job] queue monitor thread has finished
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:41,659 | INFO     | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 140251711022912)>'])
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,675 | INFO     | all workflow threads have been joined
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,675 | INFO     | end of generic workflow (traces error code: 1213)
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,676 | INFO     | traces error code: 1213
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,676 | INFO     | an exit code was already set: 1213 (will be converted to a standard shell code)
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,676 | INFO     | pilot has finished (exit code=1213, shell exit code=81)
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,831 [wrapper] ==== pilot stdout END ====
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,838 [wrapper] ==== wrapper stdout RESUME ====
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,846 [wrapper] pilotpid: 6081
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,853 [wrapper] Pilot exit status: 81
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,881 [wrapper] pandaids: 6891585317
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,889 [wrapper] WARNING: pilot exitcode non-zero: 81
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,896 [wrapper] WARNING: pilot exitcode non-zero: 81
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,952 [wrapper] cleanup supervisor_pilot 25090 6082
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,958 [wrapper] Test setup, not cleaning
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,965 [wrapper] apfmon messages muted
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,973 [wrapper] ==== wrapper stdout END ====
2025-11-24 14:10:51 (168532): Guest Log: 2025-11-24 13:10:46,979 [wrapper] ==== wrapper stderr END ====
2025-11-24 14:10:51 (168532): Guest Log:  *** Error codes and diagnostics ***
2025-11-24 14:10:51 (168532): Guest Log:  *** Listing of results directory ***
2025-11-24 14:10:51 (168532): Guest Log: total 27120
2025-11-24 14:10:51 (168532): Guest Log: -rw-r--r--. 1 atlas atlas  576529 Nov 18 17:24 pilot3.tar.gz
2025-11-24 14:10:51 (168532): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Nov 18 17:25 queuedata.json
2025-11-24 14:10:51 (168532): Guest Log: -rwx------. 1 atlas atlas   36292 Nov 18 17:26 runpilot2-wrapper.sh
2025-11-24 14:10:51 (168532): Guest Log: -rwxr-xr-x. 1 atlas atlas    9017 Nov 22 13:09 init_data.xml
2025-11-24 14:10:51 (168532): Guest Log: -rwxr-xr-x. 1 atlas atlas  590096 Nov 22 13:09 input.tar.gz
2025-11-24 14:10:51 (168532): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Nov 22 13:09 start_atlas.sh
2025-11-24 14:10:51 (168532): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Nov 22 13:09 EVNT.47493065._000478.pool.root.1 -> /data/./ATLAS.root_0
2025-11-24 14:10:51 (168532): Guest Log: -rw-r--r--. 1 atlas atlas    2773 Nov 22 13:09 pandaJob.out
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas  989768 Nov 22 13:10 agis_schedconf.cvmfs.json
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas 1526164 Nov 22 13:10 agis_ddmendpoints.agis.ALL.json
2025-11-24 14:10:51 (168532): Guest Log: drwx------. 5 atlas atlas    4096 Nov 22 13:10 pilot3
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas      98 Nov 24 13:09 pilot_heartbeat.json
2025-11-24 14:10:51 (168532): Guest Log: drwxrwx---. 3 atlas atlas    4096 Nov 24 13:10 PanDA_Pilot-6891585317
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas    1041 Nov 24 13:10 memory_monitor_summary.json
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas     939 Nov 24 13:10 heartbeat.json
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas 7974091 Nov 24 13:10 pilotlog.txt
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas 7991013 Nov 24 13:10 log.47493068._004780.job.log.1
2025-11-24 14:10:51 (168532): Guest Log: -rw-r--r--. 1 atlas atlas     571 Nov 24 13:10 runtime_log
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas 7997440 Nov 24 13:10 result.tar.gz
2025-11-24 14:10:51 (168532): Guest Log: -rw-------. 1 atlas atlas     658 Nov 24 13:10 y56KDm3def8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmj2FKDmVzemFo.diag
2025-11-24 14:10:51 (168532): Guest Log: -rw-r--r--. 1 atlas atlas    7972 Nov 24 13:10 runtime_log.err
2025-11-24 14:10:51 (168532): Guest Log: Looking for outputfile HITS.47493068._004780.pool.root.1
2025-11-24 14:10:51 (168532): Guest Log: No HITS file was produced
2025-11-24 14:10:51 (168532): Guest Log: Successfully finished the ATLAS job!
2025-11-24 14:10:51 (168532): Guest Log: Copying the results back to the shared directory!
2025-11-24 14:10:51 (168532): Guest Log:  *** Contents of shared directory: ***
2025-11-24 14:10:51 (168532): Guest Log: total 409392
2025-11-24 14:10:51 (168532): Guest Log: -rwxrwxrwx. 1 root root 410594541 Nov 22 13:08 ATLAS.root_0
2025-11-24 14:10:51 (168532): Guest Log: -rwxrwxrwx. 1 root root      9017 Nov 22 13:08 init_data.xml
2025-11-24 14:10:51 (168532): Guest Log: -rwxrwxrwx. 1 root root    590096 Nov 19 04:41 input.tar.gz
2025-11-24 14:10:51 (168532): Guest Log: -rwxrwxrwx. 1 root root   7997440 Nov 24 13:10 result.tar.gz
2025-11-24 14:10:51 (168532): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 19 04:41 start_atlas.sh
2025-11-24 14:10:51 (168532): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-24 14:10:51 (168532): VM Completion File Detected.
2025-11-24 14:10:51 (168532): Powering off VM.
2025-11-24 14:10:52 (168532): Successfully stopped VM.
2025-11-24 14:10:52 (168532): Deregistering VM. (boinc_23a2bf9bcfa19cb7, slot#6)
2025-11-24 14:10:52 (168532): Removing network bandwidth throttle group from VM.
2025-11-24 14:10:52 (168532): Removing VM from VirtualBox.
2025-11-24 14:10:57 (168532): called boinc_finish(0)

</stderr_txt>
]]>

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