Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:25 (2201264): wrapper (7.7.26015): starting
00:04:25 (2201264): wrapper: running run_atlas (--nthreads 9)
[2025-11-19 00:04:25] Arguments: --nthreads 9
[2025-11-19 00:04:25] Threads: 9
[2025-11-19 00:04:25] Checking for CVMFS
[2025-11-19 00:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 00:04:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 00:04:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 00:04:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 00:04:29] 2.13.3.0 290515 22284 361740 153030 0 245 25239739 40960000 20318 16776704 0 109826713 99.764 68617810 39683 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 00:04:29] CVMFS is ok
[2025-11-19 00:04:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 00:04:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 00:04:29] Further information can be found at the LHC@home message board.
[2025-11-19 00:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 00:04:29] Checking for apptainer binary...
[2025-11-19 00:04:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 00:04:29] Running /usr/bin/apptainer --version
[2025-11-19 00:04:30] apptainer version 1.4.4-1.el9
[2025-11-19 00:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 00:04:31] c6-5-37-4.aglt2.org
[2025-11-19 00:04:31] apptainer works
[2025-11-19 00:04:31] Set ATHENA_PROC_NUMBER=9
[2025-11-19 00:04:31] Set ATHENA_CORE_NUMBER=9
[2025-11-19 00:04:31] Starting ATLAS job with PandaID=6891592155
[2025-11-19 00:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 22:59:14]  *** The last 200 lines of the pilot log: ***
[2025-11-20 22:59:14] 2025-11-21 03:57:33,433 | INFO     | PID=2213391 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-20 22:59:14] 2025-11-21 03:57:33,433 | INFO     | .. there are 22 such processes running
[2025-11-20 22:59:14] 2025-11-21 03:57:34,345 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-20 22:59:14] 2025-11-21 03:57:34,355 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2708.4189285714288
[2025-11-20 22:59:14] 2025-11-21 03:57:34,367 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6891592155/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 22:59:14] 2025-11-21 03:57:34,368 | INFO     | extracted standard info from prmon json
[2025-11-20 22:59:14] 2025-11-21 03:57:34,369 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 22:59:14] 2025-11-21 03:57:34,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 22:59:14] 2025-11-21 03:57:34,422 | INFO     | fitting pss+swap vs Time
[2025-11-20 22:59:14] 2025-11-21 03:57:34,426 | INFO     | sum of square deviations: 6533297765298.591
[2025-11-20 22:59:14] 2025-11-21 03:57:34,439 | INFO     | time since job start (168671s) is within the limit (172800.0s)
[2025-11-20 22:59:14] 2025-11-21 03:57:34,557 | INFO     | sum of deviations: 22847870104895.996
[2025-11-20 22:59:14] 2025-11-21 03:57:34,557 | INFO     | mean x: 1763613188.2461984
[2025-11-20 22:59:14] 2025-11-21 03:57:34,557 | INFO     | mean y: 3092522.430847212
[2025-11-20 22:59:14] 2025-11-21 03:57:34,557 | INFO     | intersect: -6164513254.601886
[2025-11-20 22:59:14] 2025-11-21 03:57:34,560 | INFO     | chi2: 16.78962460105025
[2025-11-20 22:59:14] 2025-11-21 03:57:34,564 | INFO     | sum of square deviations: 6497884914283.113
[2025-11-20 22:59:14] 2025-11-21 03:57:34,686 | INFO     | sum of deviations: 23714665847377.742
[2025-11-20 22:59:14] 2025-11-21 03:57:34,687 | INFO     | mean x: 1763613035.758433
[2025-11-20 22:59:14] 2025-11-21 03:57:34,687 | INFO     | mean y: 3096254.3449401525
[2025-11-20 22:59:14] 2025-11-21 03:57:34,687 | INFO     | intersect: -6433381827.18552
[2025-11-20 22:59:14] 2025-11-21 03:57:34,691 | INFO     | chi2: 14.298288549716052
[2025-11-20 22:59:14] 2025-11-21 03:57:34,692 | INFO     | current chi2=14.298288549716052 (change=14.838545295279301 %)
[2025-11-20 22:59:14] 2025-11-21 03:57:34,692 | INFO     | right removable region: 2756
[2025-11-20 22:59:14] 2025-11-21 03:57:34,696 | INFO     | sum of square deviations: 6497873716403.633
[2025-11-20 22:59:14] 2025-11-21 03:57:34,864 | INFO     | sum of deviations: 21603242429233.316
[2025-11-20 22:59:14] 2025-11-21 03:57:34,865 | INFO     | mean x: 1763613340.7580705
[2025-11-20 22:59:14] 2025-11-21 03:57:34,865 | INFO     | mean y: 3097880.7395719984
[2025-11-20 22:59:14] 2025-11-21 03:57:34,865 | INFO     | intersect: -5860322711.083453
[2025-11-20 22:59:14] 2025-11-21 03:57:34,869 | INFO     | chi2: 12.212547168683612
[2025-11-20 22:59:14] 2025-11-21 03:57:34,869 | INFO     | current chi2=12.212547168683612 (change=27.261344676404054 %)
[2025-11-20 22:59:14] 2025-11-21 03:57:34,873 | INFO     | sum of square deviations: 6462577734524.86
[2025-11-20 22:59:14] 2025-11-21 03:57:35,024 | INFO     | sum of deviations: 20474089806243.047
[2025-11-20 22:59:14] 2025-11-21 03:57:35,025 | INFO     | mean x: 1763613493.2703488
[2025-11-20 22:59:14] 2025-11-21 03:57:35,025 | INFO     | mean y: 3102759.8426598837
[2025-11-20 22:59:14] 2025-11-21 03:57:35,025 | INFO     | intersect: -5584200407.408741
[2025-11-20 22:59:14] 2025-11-21 03:57:35,028 | INFO     | chi2: 8.550493337738104
[2025-11-20 22:59:14] 2025-11-21 03:57:35,028 | INFO     | current chi2=8.550493337738104 (change=29.985995389528885 %)
[2025-11-20 22:59:14] 2025-11-21 03:57:35,031 | INFO     | sum of square deviations: 6427410426583.507
[2025-11-20 22:59:14] 2025-11-21 03:57:35,167 | INFO     | sum of deviations: 19634962608208.277
[2025-11-20 22:59:14] 2025-11-21 03:57:35,167 | INFO     | mean x: 1763613645.781216
[2025-11-20 22:59:14] 2025-11-21 03:57:35,167 | INFO     | mean y: 3106398.5362213324
[2025-11-20 22:59:14] 2025-11-21 03:57:35,167 | INFO     | intersect: -5384520295.881493
[2025-11-20 22:59:14] 2025-11-21 03:57:35,171 | INFO     | chi2: 6.6714880005703945
[2025-11-20 22:59:14] 2025-11-21 03:57:35,171 | INFO     | current chi2=6.6714880005703945 (change=21.975402622379796 %)
[2025-11-20 22:59:14] 2025-11-21 03:57:35,171 | INFO     | left removable region: 30
[2025-11-20 22:59:14] 2025-11-21 03:57:35,174 | INFO     | sum of square deviations: 6281124956321.699
[2025-11-20 22:59:14] 2025-11-21 03:57:35,307 | INFO     | sum of deviations: 19582100509676.82
[2025-11-20 22:59:14] 2025-11-21 03:57:35,308 | INFO     | mean x: 1763613920.303008
[2025-11-20 22:59:14] 2025-11-21 03:57:35,308 | INFO     | mean y: 3115188.1999266325
[2025-11-20 22:59:14] 2025-11-21 03:57:35,308 | INFO     | intersect: -5495145917.540426
[2025-11-20 22:59:14] 2025-11-21 03:57:35,311 | INFO     | chi2: 3.146183182203427
[2025-11-20 22:59:14] 2025-11-21 03:57:35,311 | INFO     | current memory leak: 3.12 B/s (using 2726 data points, chi2=3.15)
[2025-11-20 22:59:14] 2025-11-21 03:57:35,314 | INFO     | could have reported an average CPU frequency of 2830 MHz (95 samples)
[2025-11-20 22:59:14] 2025-11-21 03:57:35,314 | INFO     | ..............................
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . Timing measurements:
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . get job = 0 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . initial setup = 11 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . payload setup = 63 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . stage-in = 0 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . payload execution = 168507 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . stage-out = 4 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | . log creation = 1 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,315 | INFO     | ..............................
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | 
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | job summary report
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | --------------------------------------------------
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | PanDA job id: 6891592155
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | task id: 47493068
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | errors: (none)
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | pilot state: finished 
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | transexitcode: 0
[2025-11-20 22:59:14] 2025-11-21 03:57:35,410 | INFO     | exeerrorcode: 0
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | exeerrordiag: 
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | exitcode: 0
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | exitmsg: OK
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | cpuconsumptiontime: 249985 s
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | nevents: 1000
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | neventsw: 0
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | pid: 2240932
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | pgrp: 2240932
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | corecount: 9
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | event service: False
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | sizes: {0: 2296366, 1: 2297051, 2: 2297250, 13: 2297250, 24: 2297306, 36: 2297334, 41: 2297752, 47: 2297780, 168574: 2397417, 168575: 2397416, 168579: 2408398, 168
[2025-11-20 22:59:14] 2025-11-21 03:57:35,411 | INFO     | --------------------------------------------------
[2025-11-20 22:59:14] 2025-11-21 03:57:35,412 | INFO     | 
[2025-11-20 22:59:14] 2025-11-21 03:57:35,412 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-20 22:59:14] 2025-11-21 03:57:35,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 22:59:14] 2025-11-21 03:57:35,438 | INFO     | job 6891592155 has completed (purged errors)
[2025-11-20 22:59:14] 2025-11-21 03:57:35,439 | INFO     | overall cleanup function is called
[2025-11-20 22:59:14] 2025-11-21 03:57:36,459 | INFO     | --- collectZombieJob: --- 10, [2240932]
[2025-11-20 22:59:14] 2025-11-21 03:57:36,459 | INFO     | zombie collector waiting for pid 2240932
[2025-11-20 22:59:14] 2025-11-21 03:57:36,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 22:59:14] 2025-11-21 03:57:36,460 | INFO     | collected zombie processes
[2025-11-20 22:59:14] 2025-11-21 03:57:36,460 | INFO     | will attempt to kill all subprocesses of pid=2240932
[2025-11-20 22:59:14] 2025-11-21 03:57:36,808 | INFO     | process IDs to be killed: [2240932] (in reverse order)
[2025-11-20 22:59:14] 2025-11-21 03:57:36,918 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 22:59:14] 2025-11-21 03:57:36,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 22:59:14] 2025-11-21 03:57:36,932 | INFO     | did not find any defunct processes belonging to 2240932
[2025-11-20 22:59:14] 2025-11-21 03:57:36,945 | INFO     | did not find any defunct processes belonging to 2240932
[2025-11-20 22:59:14] 2025-11-21 03:57:36,947 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 22:59:14] 2025-11-21 03:57:36,947 | INFO     | ready for new job
[2025-11-20 22:59:14] 2025-11-21 03:57:36,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 22:59:14] 2025-11-21 03:57:36,954 | INFO     | ***************************************
[2025-11-20 22:59:14] 2025-11-21 03:57:36,954 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 22:59:14] 2025-11-21 03:57:36,954 | INFO     | ***************************************
[2025-11-20 22:59:14] 2025-11-21 03:57:36,954 | INFO     | 
[2025-11-20 22:59:14] 2025-11-21 03:57:36,958 | INFO     | architecture information:
[2025-11-20 22:59:14] 2025-11-21 03:57:36,959 | INFO     | executing command: cat /etc/os-release
[2025-11-20 22:59:14] 2025-11-21 03:57:36,978 | INFO     | cat /etc/os-release:
[2025-11-20 22:59:14] NAME="CentOS Linux"
[2025-11-20 22:59:14] VERSION="7 (Core)"
[2025-11-20 22:59:14] ID="centos"
[2025-11-20 22:59:14] ID_LIKE="rhel fedora"
[2025-11-20 22:59:14] VERSION_ID="7"
[2025-11-20 22:59:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 22:59:14] ANSI_COLOR="0;31"
[2025-11-20 22:59:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 22:59:14] HOME_URL="https://www.centos.org/"
[2025-11-20 22:59:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 22:59:14] 
[2025-11-20 22:59:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 22:59:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 22:59:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 22:59:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 22:59:14] 
[2025-11-20 22:59:14] 2025-11-21 03:57:36,979 | INFO     | ***************************************
[2025-11-20 22:59:14] 2025-11-21 03:57:37,482 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-20 22:59:14] 2025-11-21 03:57:37,512 | INFO     | sufficient remaining disk space (65975353344 B)
[2025-11-20 22:59:14] 2025-11-21 03:57:37,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 22:59:14] 2025-11-21 03:57:37,513 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 22:59:14] 2025-11-21 03:57:37,513 | INFO     | update_server=False
[2025-11-20 22:59:14] 2025-11-21 03:57:37,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 22:59:14] 2025-11-21 03:57:37,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:59:14] 2025-11-21 03:57:37,514 | INFO     | aborting loop
[2025-11-20 22:59:14] 2025-11-21 03:57:37,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 22:59:14] 2025-11-21 03:57:37,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 22:59:14] 2025-11-21 03:57:38,272 | INFO     | all job control threads have been joined
[2025-11-20 22:59:14] 2025-11-21 03:57:38,473 | INFO     | all data control threads have been joined
[2025-11-20 22:59:14] 2025-11-21 03:57:38,518 | INFO     | [job] retrieve thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:38,519 | INFO     | [job] job monitor thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:38,571 | INFO     | all payload control threads have been joined
[2025-11-20 22:59:14] 2025-11-21 03:57:38,628 | INFO     | [job] validate thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:38,970 | INFO     | [data] copytool_in thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,015 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,118 | INFO     | [payload] failed_post thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,144 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,273 | INFO     | [payload] validate_post thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,277 | INFO     | [job] control thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,479 | INFO     | [data] control thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,505 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,534 | INFO     | [data] copytool_out thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:39,577 | INFO     | [payload] control thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:40,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:59:14] 2025-11-21 03:57:41,425 | INFO     | [job] queue monitor thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:41,588 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 22:59:14] 2025-11-21 03:57:53,460 | INFO     | [monitor] cgroup control has ended
[2025-11-20 22:59:14] 2025-11-21 03:57:54,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440903239488)>', '<ExcThread(monitor, started 140440179300096)>']
[2025-11-20 22:59:14] 2025-11-21 03:57:59,115 | INFO     | all workflow threads have been joined
[2025-11-20 22:59:14] 2025-11-21 03:57:59,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 22:59:14] 2025-11-21 03:57:59,116 | INFO     | traces error code: 0
[2025-11-20 22:59:14] 2025-11-21 03:57:59,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 22:59:14] 2025-11-21 03:58:07,928 | INFO     | PID=2213391 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 22:59:14] 2025-11-21 03:58:07,929 | INFO     | .. there are 22 such processes running
[2025-11-20 22:59:14] 2025-11-21 03:58:07,929 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 22:59:14] 2025-11-21 03:58:07,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 22:59:14] 2025-11-21 03:58:07,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 22:59:14] 2025-11-21 03:58:07,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 22:59:14] 2025-11-21 03:58:07,929 | INFO     | [monitor] control thread has ended
[2025-11-20 22:59:14] 2025-11-21 03:58:08,159 [wrapper] ==== pilot stdout END ====
[2025-11-20 22:59:14] 2025-11-21 03:58:08,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 22:59:14] 2025-11-21 03:58:08,168 [wrapper] pilotpid: 2213391
[2025-11-20 22:59:14] 2025-11-21 03:58:08,173 [wrapper] Pilot exit status: 0
[2025-11-20 22:59:14] 2025-11-21 03:58:08,191 [wrapper] pandaids: 6891592155
[2025-11-20 22:59:14] 2025-11-21 03:58:08,287 [wrapper] cleanup supervisor_pilot 2595112 2213392
[2025-11-20 22:59:14] 2025-11-21 03:58:08,290 [wrapper] Test setup, not cleaning
[2025-11-20 22:59:14] 2025-11-21 03:58:08,296 [wrapper] apfmon messages muted
[2025-11-20 22:59:14] 2025-11-21 03:58:08,300 [wrapper] ==== wrapper stdout END ====
[2025-11-20 22:59:14] 2025-11-21 03:58:08,304 [wrapper] ==== wrapper stderr END ====
[2025-11-20 22:59:14]  *** Error codes and diagnostics ***
[2025-11-20 22:59:14]     "exeErrorCode": 0,
[2025-11-20 22:59:14]     "exeErrorDiag": "",
[2025-11-20 22:59:14]     "pilotErrorCode": 0,
[2025-11-20 22:59:14]     "pilotErrorDiag": "",
[2025-11-20 22:59:14]  *** Listing of results directory ***
[2025-11-20 22:59:14] total 1361584
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 12:59 pilot3.tar.gz
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:15 queuedata.json
[2025-11-20 22:59:14] -rwx------. 1 boincer umatlas     36292 Nov 18 13:18 runpilot2-wrapper.sh
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas       100 Nov 19 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 22:59:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 00:04 run_atlas
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas       105 Nov 19 00:04 job.xml
[2025-11-20 22:59:14] -rw-r--r--. 2 boincer umatlas 410472123 Nov 19 00:04 EVNT.47493065._000641.pool.root.1
[2025-11-20 22:59:14] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 00:04 start_atlas.sh
[2025-11-20 22:59:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 00:04 shared
[2025-11-20 22:59:14] -rw-r--r--. 2 boincer umatlas    590093 Nov 19 00:04 input.tar.gz
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas         0 Nov 19 00:04 boinc_lockfile
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas      2770 Nov 19 00:04 pandaJob.out
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas    992806 Nov 19 00:06 agis_schedconf.cvmfs.json
[2025-11-20 22:59:14] drwx------. 5 boincer umatlas      4096 Nov 19 00:06 pilot3
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas       533 Nov 20 22:38 boinc_task_state.xml
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas 933947584 Nov 20 22:56 HITS.47493068._005901.pool.root.1
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas      6843 Nov 20 22:56 init_data.xml
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas        95 Nov 20 22:57 pilot_heartbeat.json
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas      1072 Nov 20 22:57 memory_monitor_summary.json
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas   1526164 Nov 20 22:57 agis_ddmendpoints.agis.ALL.json
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas   3421471 Nov 20 22:57 log.47493068._005901.job.log.tgz.1
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas      8660 Nov 20 22:57 heartbeat.json
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas       823 Nov 20 22:58 pilotlog.txt
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas  19542495 Nov 20 22:58 log.47493068._005901.job.log.1
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas       353 Nov 20 22:58 output.list
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas       620 Nov 20 22:58 runtime_log
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas  22978560 Nov 20 22:58 result.tar.gz
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas       670 Nov 20 22:58 w3KKDmOSff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjDGKDmwawTSm.diag
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas      8710 Nov 20 22:58 runtime_log.err
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 22:59 boinc_mmap_file
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas        29 Nov 20 22:59 wrapper_checkpoint.txt
[2025-11-20 22:59:14] -rw-r--r--. 1 boincer umatlas     21455 Nov 20 22:59 stderr.txt
[2025-11-20 22:59:14] HITS file was successfully produced:
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas 933947584 Nov 20 22:56 shared/HITS.pool.root.1
[2025-11-20 22:59:14]  *** Contents of shared directory: ***
[2025-11-20 22:59:14] total 1335952
[2025-11-20 22:59:14] -rw-r--r--. 2 boincer umatlas 410472123 Nov 19 00:04 ATLAS.root_0
[2025-11-20 22:59:14] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 00:04 start_atlas.sh
[2025-11-20 22:59:14] -rw-r--r--. 2 boincer umatlas    590093 Nov 19 00:04 input.tar.gz
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas 933947584 Nov 20 22:56 HITS.pool.root.1
[2025-11-20 22:59:14] -rw-------. 1 boincer umatlas  22978560 Nov 20 22:58 result.tar.gz
22:59:16 (2201264): run_atlas exited; CPU time 253591.474352
22:59:16 (2201264): called boinc_finish(0)

</stderr_txt>
]]>

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