Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:55:56 (4037513): wrapper (7.7.26015): starting
05:55:56 (4037513): wrapper: running run_atlas (--nthreads 3)
[2025-11-20 05:55:56] Arguments: --nthreads 3
[2025-11-20 05:55:56] Threads: 3
[2025-11-20 05:55:56] Checking for CVMFS
[2025-11-20 05:55:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 05:55:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 05:55:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 05:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 05:55:57] 2.9.2.0 3774142 1971 71272 153067 0 81 33092529 36864000 0 130560 0 730598 99.721 257999 4886 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 05:55:57] CVMFS is ok
[2025-11-20 05:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 05:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 05:55:57] Further information can be found at the LHC@home message board.
[2025-11-20 05:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 05:55:57] Checking for apptainer binary...
[2025-11-20 05:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 05:55:57] Running /usr/bin/apptainer --version
[2025-11-20 05:55:57] apptainer version 1.4.1-1.1
[2025-11-20 05:55:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 05:55:57] madmaxA273
[2025-11-20 05:55:57] apptainer works
[2025-11-20 05:55:57] Set ATHENA_PROC_NUMBER=3
[2025-11-20 05:55:57] Set ATHENA_CORE_NUMBER=3
[2025-11-20 05:55:57] Starting ATLAS job with PandaID=6891588094
[2025-11-20 05:55:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 14:00:00]  *** The last 200 lines of the pilot log: ***
[2025-11-20 14:00:00] 2025-11-20 12:59:23,837 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 14:00:00] 2025-11-20 12:59:23,837 | INFO     | ***************************************
[2025-11-20 14:00:00] 2025-11-20 12:59:23,837 | INFO     | 
[2025-11-20 14:00:00] 2025-11-20 12:59:23,838 | INFO     | architecture information:
[2025-11-20 14:00:00] 2025-11-20 12:59:23,838 | INFO     | executing command: cat /etc/os-release
[2025-11-20 14:00:00] 2025-11-20 12:59:23,846 | INFO     | cat /etc/os-release:
[2025-11-20 14:00:00] NAME="CentOS Linux"
[2025-11-20 14:00:00] VERSION="7 (Core)"
[2025-11-20 14:00:00] ID="centos"
[2025-11-20 14:00:00] ID_LIKE="rhel fedora"
[2025-11-20 14:00:00] VERSION_ID="7"
[2025-11-20 14:00:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 14:00:00] ANSI_COLOR="0;31"
[2025-11-20 14:00:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 14:00:00] HOME_URL="https://www.centos.org/"
[2025-11-20 14:00:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 14:00:00] 
[2025-11-20 14:00:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 14:00:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 14:00:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 14:00:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 14:00:00] 
[2025-11-20 14:00:00] 2025-11-20 12:59:23,846 | INFO     | ***************************************
[2025-11-20 14:00:00] 2025-11-20 12:59:24,350 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-20 14:00:00] 2025-11-20 12:59:24,362 | INFO     | sufficient remaining disk space (323534979072 B)
[2025-11-20 14:00:00] 2025-11-20 12:59:24,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 14:00:00] 2025-11-20 12:59:24,362 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 14:00:00] 2025-11-20 12:59:24,362 | INFO     | update_server=False
[2025-11-20 14:00:00] 2025-11-20 12:59:24,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 14:00:00] 2025-11-20 12:59:24,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 14:00:00] 2025-11-20 12:59:24,363 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-20 14:00:00] 2025-11-20 12:59:24,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 14:00:00] 2025-11-20 12:59:24,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 14:00:00] 2025-11-20 12:59:24,363 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 14:00:00] 2025-11-20 12:59:24,363 | INFO     | aborting loop
[2025-11-20 14:00:00] 2025-11-20 12:59:24,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 14:00:00] 2025-11-20 12:59:24,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 14:00:00] 2025-11-20 12:59:24,439 | INFO     | all payload control threads have been joined
[2025-11-20 14:00:00] 2025-11-20 12:59:25,024 | INFO     | all data control threads have been joined
[2025-11-20 14:00:00] 2025-11-20 12:59:25,054 | INFO     | [monitor] cgroup control has ended
[2025-11-20 14:00:00] 2025-11-20 12:59:25,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 14:00:00] 2025-11-20 12:59:25,368 | INFO     | [job] retrieve thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:25,368 | INFO     | [job] queue monitor thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:25,368 | INFO     | [job] job monitor thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:25,445 | INFO     | [payload] control thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:25,680 | INFO     | all job control threads have been joined
[2025-11-20 14:00:00] 2025-11-20 12:59:25,893 | INFO     | [payload] validate_post thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:25,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,028 | INFO     | [data] control thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,293 | INFO     | [data] copytool_in thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,369 | INFO     | [data] copytool_out thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,622 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,622 | INFO     | [payload] failed_post thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,665 | INFO     | [job] validate thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,686 | INFO     | [job] control thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,754 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:26,769 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:29,219 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 14:00:00] 2025-11-20 12:59:30,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419623962432)>', '<ExcThread(monitor, started 140418989684480)>']
[2025-11-20 14:00:00] 2025-11-20 12:59:31,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 14:00:00] 2025-11-20 12:59:31,400 | INFO     | [monitor] control thread has ended
[2025-11-20 14:00:00] 2025-11-20 12:59:35,968 | INFO     | all workflow threads have been joined
[2025-11-20 14:00:00] 2025-11-20 12:59:35,969 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 14:00:00] 2025-11-20 12:59:35,969 | INFO     | traces error code: 0
[2025-11-20 14:00:00] 2025-11-20 12:59:35,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 14:00:00] 2025-11-20 12:59:36,019 [wrapper] ==== pilot stdout END ====
[2025-11-20 14:00:00] 2025-11-20 12:59:36,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 14:00:00] 2025-11-20 12:59:36,024 [wrapper] pilotpid: 4041228
[2025-11-20 14:00:00] 2025-11-20 12:59:36,026 [wrapper] Pilot exit status: 0
[2025-11-20 14:00:00] 2025-11-20 12:59:36,033 [wrapper] pandaids: 6891588094
[2025-11-20 14:00:00] 2025-11-20 12:59:36,049 [wrapper] cleanup supervisor_pilot 4097249 4041229
[2025-11-20 14:00:00] 2025-11-20 12:59:36,051 [wrapper] Test setup, not cleaning
[2025-11-20 14:00:00] 2025-11-20 12:59:36,054 [wrapper] apfmon messages muted
[2025-11-20 14:00:00] 2025-11-20 12:59:36,056 [wrapper] ==== wrapper stdout END ====
[2025-11-20 14:00:00] 2025-11-20 12:59:36,058 [wrapper] ==== wrapper stderr END ====
[2025-11-20 14:00:00]  *** Error codes and diagnostics ***
[2025-11-20 14:00:00]     "exeErrorCode": 0,
[2025-11-20 14:00:00]     "exeErrorDiag": "",
[2025-11-20 14:00:00]     "pilotErrorCode": 0,
[2025-11-20 14:00:00]     "pilotErrorDiag": "",
[2025-11-20 14:00:00]  *** Listing of results directory ***
[2025-11-20 14:00:00] total 1307936
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:24 pilot3.tar.gz
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:32 queuedata.json
[2025-11-20 14:00:00] -rwx------ 1 boinc boinc     36292 Nov 18 18:33 runpilot2-wrapper.sh
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc       100 Nov 20 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 14:00:00] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 05:55 run_atlas
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc       105 Nov 20 05:55 job.xml
[2025-11-20 14:00:00] -rw-r--r-- 2 boinc boinc 411915141 Nov 20 05:55 EVNT.47493065._000506.pool.root.1
[2025-11-20 14:00:00] -rw-r--r-- 2 boinc boinc    590095 Nov 20 05:55 input.tar.gz
[2025-11-20 14:00:00] -rw-r--r-- 2 boinc boinc     15120 Nov 20 05:55 start_atlas.sh
[2025-11-20 14:00:00] drwxrwx--x 2 boinc boinc      4096 Nov 20 05:55 shared
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc         0 Nov 20 05:55 boinc_setup_complete
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc      6442 Nov 20 05:55 init_data.xml
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc         0 Nov 20 05:55 boinc_lockfile
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc      2773 Nov 20 05:55 pandaJob.out
[2025-11-20 14:00:00] -rw------- 1 boinc boinc    989427 Nov 20 05:56 agis_schedconf.cvmfs.json
[2025-11-20 14:00:00] drwx------ 5 boinc boinc      4096 Nov 20 05:56 pilot3
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc       531 Nov 20 13:54 boinc_task_state.xml
[2025-11-20 14:00:00] -rw------- 1 boinc boinc        95 Nov 20 13:58 pilot_heartbeat.json
[2025-11-20 14:00:00] -rw------- 1 boinc boinc 913012420 Nov 20 13:58 HITS.47493068._005052.pool.root.1
[2025-11-20 14:00:00] -rw------- 1 boinc boinc      1028 Nov 20 13:59 memory_monitor_summary.json
[2025-11-20 14:00:00] -rw------- 1 boinc boinc   1525063 Nov 20 13:59 agis_ddmendpoints.agis.ALL.json
[2025-11-20 14:00:00] -rw------- 1 boinc boinc   1160236 Nov 20 13:59 log.47493068._005052.job.log.tgz.1
[2025-11-20 14:00:00] -rw------- 1 boinc boinc      8575 Nov 20 13:59 heartbeat.json
[2025-11-20 14:00:00] -rw------- 1 boinc boinc      4556 Nov 20 13:59 pilotlog.txt
[2025-11-20 14:00:00] -rw------- 1 boinc boinc   4080533 Nov 20 13:59 log.47493068._005052.job.log.1
[2025-11-20 14:00:00] -rw------- 1 boinc boinc       353 Nov 20 13:59 output.list
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc       620 Nov 20 13:59 runtime_log
[2025-11-20 14:00:00] -rw------- 1 boinc boinc   5263360 Nov 20 13:59 result.tar.gz
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc      8798 Nov 20 13:59 runtime_log.err
[2025-11-20 14:00:00] -rw------- 1 boinc boinc       669 Nov 20 13:59 BKmLDm2kef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQ5FKDm9ZSCqm.diag
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc      8192 Nov 20 14:00 boinc_mmap_file
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc        28 Nov 20 14:00 wrapper_checkpoint.txt
[2025-11-20 14:00:00] -rw-r--r-- 1 boinc boinc      9153 Nov 20 14:00 stderr.txt
[2025-11-20 14:00:00] HITS file was successfully produced:
[2025-11-20 14:00:00] -rw------- 1 boinc boinc 913012420 Nov 20 13:58 shared/HITS.pool.root.1
[2025-11-20 14:00:00]  *** Contents of shared directory: ***
[2025-11-20 14:00:00] total 1299624
[2025-11-20 14:00:00] -rw-r--r-- 2 boinc boinc 411915141 Nov 20 05:55 ATLAS.root_0
[2025-11-20 14:00:00] -rw-r--r-- 2 boinc boinc    590095 Nov 20 05:55 input.tar.gz
[2025-11-20 14:00:00] -rw-r--r-- 2 boinc boinc     15120 Nov 20 05:55 start_atlas.sh
[2025-11-20 14:00:00] -rw------- 1 boinc boinc 913012420 Nov 20 13:58 HITS.pool.root.1
[2025-11-20 14:00:00] -rw------- 1 boinc boinc   5263360 Nov 20 13:59 result.tar.gz
14:00:02 (4037513): run_atlas exited; CPU time 85533.049612
14:00:02 (4037513): called boinc_finish(0)

</stderr_txt>
]]>

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