Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:32:56 (3288652): wrapper (7.7.26015): starting
13:32:56 (3288652): wrapper: running run_atlas (--nthreads 3)
[2025-11-21 13:32:56] Arguments: --nthreads 3
[2025-11-21 13:32:56] Threads: 3
[2025-11-21 13:32:56] Checking for CVMFS
[2025-11-21 13:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 13:32:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 13:32:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 13:32:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 13:32:56] 2.9.2.0 3064284 948 55512 153126 1 80 8811296 36864001 0 130560 0 352629 99.978 29225 1147 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 13:32:56] CVMFS is ok
[2025-11-21 13:32:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 13:32:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 13:32:56] Further information can be found at the LHC@home message board.
[2025-11-21 13:32:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 13:32:56] Checking for apptainer binary...
[2025-11-21 13:32:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 13:32:56] Running /usr/bin/apptainer --version
[2025-11-21 13:32:56] apptainer version 1.4.1-1.1
[2025-11-21 13:32:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 13:32:56] thA363a
[2025-11-21 13:32:56] apptainer works
[2025-11-21 13:32:56] Set ATHENA_PROC_NUMBER=3
[2025-11-21 13:32:56] Set ATHENA_CORE_NUMBER=3
[2025-11-21 13:32:56] Starting ATLAS job with PandaID=6891591813
[2025-11-21 13:32:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:26:53]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:26:53] 2025-11-21 20:26:19,946 | INFO     | time since job start (28397s) is within the limit (172800.0s)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,362 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 21:26:53] 2025-11-21 20:26:20,363 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3856.139583333333
[2025-11-21 21:26:53] 2025-11-21 20:26:20,364 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891591813/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,364 | INFO     | extracted standard info from prmon json
[2025-11-21 21:26:53] 2025-11-21 20:26:20,364 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:26:53] 2025-11-21 20:26:20,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:26:53] 2025-11-21 20:26:20,367 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:26:53] 2025-11-21 20:26:20,367 | INFO     | sum of square deviations: 31378644152.5
[2025-11-21 21:26:53] 2025-11-21 20:26:20,369 | INFO     | sum of deviations: 113258252565.00005
[2025-11-21 21:26:53] 2025-11-21 20:26:20,369 | INFO     | mean x: 1763742584.5
[2025-11-21 21:26:53] 2025-11-21 20:26:20,369 | INFO     | mean y: 2186860.948497854
[2025-11-21 21:26:53] 2025-11-21 20:26:20,369 | INFO     | intersect: -6363875424.092322
[2025-11-21 21:26:53] 2025-11-21 20:26:20,369 | INFO     | chi2: 4.541754662138529
[2025-11-21 21:26:53] 2025-11-21 20:26:20,369 | INFO     | sum of square deviations: 30379397510.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,371 | INFO     | sum of deviations: 195615035155.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,371 | INFO     | mean x: 1763742432.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,371 | INFO     | mean y: 2199391.010845987
[2025-11-21 21:26:53] 2025-11-21 20:26:20,371 | INFO     | intersect: -11354659734.535559
[2025-11-21 21:26:53] 2025-11-21 20:26:20,371 | INFO     | chi2: 2.613924269042948
[2025-11-21 21:26:53] 2025-11-21 20:26:20,371 | INFO     | current chi2=2.613924269042948 (change=42.446819269357974 %)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,371 | INFO     | sum of square deviations: 29401593130.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,373 | INFO     | sum of deviations: 196424657167.00003
[2025-11-21 21:26:53] 2025-11-21 20:26:20,373 | INFO     | mean x: 1763742279.5
[2025-11-21 21:26:53] 2025-11-21 20:26:20,373 | INFO     | mean y: 2199517.263157895
[2025-11-21 21:26:53] 2025-11-21 20:26:20,373 | INFO     | intersect: -11780919548.765854
[2025-11-21 21:26:53] 2025-11-21 20:26:20,374 | INFO     | chi2: 2.6072023952837022
[2025-11-21 21:26:53] 2025-11-21 20:26:20,374 | INFO     | current chi2=2.6072023952837022 (change=0.2571564080434022 %)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,374 | INFO     | right removable region: 455
[2025-11-21 21:26:53] 2025-11-21 20:26:20,374 | INFO     | sum of square deviations: 30379397510.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,376 | INFO     | sum of deviations: 13674990369.99998
[2025-11-21 21:26:53] 2025-11-21 20:26:20,376 | INFO     | mean x: 1763742737.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,376 | INFO     | mean y: 2202037.10845987
[2025-11-21 21:26:53] 2025-11-21 20:26:20,376 | INFO     | intersect: -791729604.7449737
[2025-11-21 21:26:53] 2025-11-21 20:26:20,376 | INFO     | chi2: 2.3251305068440176
[2025-11-21 21:26:53] 2025-11-21 20:26:20,376 | INFO     | current chi2=2.3251305068440176 (change=48.805457806274205 %)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,376 | INFO     | sum of square deviations: 29401593130.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | sum of deviations: -12272056493.999958
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | mean x: 1763742889.5
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | mean y: 2206065.745614035
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | intersect: 738382241.1362408
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | chi2: 2.0724386176690457
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | current chi2=2.0724386176690457 (change=10.86785831725031 %)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | left removable region: 20
[2025-11-21 21:26:53] 2025-11-21 20:26:20,378 | INFO     | sum of square deviations: 25523715770.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | sum of deviations: 54829084694.00003
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | mean x: 1763742859.0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | mean y: 2222467.8666666667
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | intersect: -3786583498.551943
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | chi2: 0.10017017192314723
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | current memory leak: 2.15 B/s (using 435 data points, chi2=0.10)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | could have reported an average CPU frequency of 4011 MHz (19 samples)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | ..............................
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . Timing measurements:
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . get job = 0 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . initial setup = 1 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . payload setup = 3 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . stage-in = 0 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . payload execution = 28371 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . stage-out = 1 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,380 | INFO     | . log creation = 0 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,381 | INFO     | ..............................
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | 
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | job summary report
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | --------------------------------------------------
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | PanDA job id: 6891591813
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | task id: 47493068
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | errors: (none)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | pilot state: finished 
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | transexitcode: 0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | exeerrorcode: 0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | exeerrordiag: 
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | exitcode: 0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | exitmsg: OK
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | cpuconsumptiontime: 83685 s
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | nevents: 1000
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | neventsw: 0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | pid: 3298826
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | pgrp: 3298826
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | corecount: 3
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | event service: False
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | sizes: {0: 2298628, 1: 2298827, 3: 2299089, 11: 2299117, 28377: 2337848, 28379: 2347032, 28384: 2347222}
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | --------------------------------------------------
[2025-11-21 21:26:53] 2025-11-21 20:26:20,411 | INFO     | 
[2025-11-21 21:26:53] 2025-11-21 20:26:20,412 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-21 21:26:53] 2025-11-21 20:26:20,424 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | job 6891591813 has completed (purged errors)
[2025-11-21 21:26:53] 2025-11-21 20:26:20,425 | INFO     | overall cleanup function is called
[2025-11-21 21:26:53] 2025-11-21 20:26:21,434 | INFO     | --- collectZombieJob: --- 10, [3298826]
[2025-11-21 21:26:53] 2025-11-21 20:26:21,434 | INFO     | zombie collector waiting for pid 3298826
[2025-11-21 21:26:53] 2025-11-21 20:26:21,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:26:53] 2025-11-21 20:26:21,434 | INFO     | collected zombie processes
[2025-11-21 21:26:53] 2025-11-21 20:26:21,434 | INFO     | will attempt to kill all subprocesses of pid=3298826
[2025-11-21 21:26:53] 2025-11-21 20:26:21,489 | INFO     | process IDs to be killed: [3298826] (in reverse order)
[2025-11-21 21:26:53] 2025-11-21 20:26:21,517 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:26:53] 2025-11-21 20:26:21,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:26:53] 2025-11-21 20:26:21,519 | INFO     | did not find any defunct processes belonging to 3298826
[2025-11-21 21:26:53] 2025-11-21 20:26:21,521 | INFO     | did not find any defunct processes belonging to 3298826
[2025-11-21 21:26:53] 2025-11-21 20:26:21,521 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:26:53] 2025-11-21 20:26:21,521 | INFO     | ready for new job
[2025-11-21 21:26:53] 2025-11-21 20:26:21,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:26:53] 2025-11-21 20:26:21,523 | INFO     | ***************************************
[2025-11-21 21:26:53] 2025-11-21 20:26:21,523 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:26:53] 2025-11-21 20:26:21,523 | INFO     | ***************************************
[2025-11-21 21:26:53] 2025-11-21 20:26:21,523 | INFO     | 
[2025-11-21 21:26:53] 2025-11-21 20:26:21,523 | INFO     | architecture information:
[2025-11-21 21:26:53] 2025-11-21 20:26:21,524 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:26:53] 2025-11-21 20:26:21,533 | INFO     | cat /etc/os-release:
[2025-11-21 21:26:53] NAME="CentOS Linux"
[2025-11-21 21:26:53] VERSION="7 (Core)"
[2025-11-21 21:26:53] ID="centos"
[2025-11-21 21:26:53] ID_LIKE="rhel fedora"
[2025-11-21 21:26:53] VERSION_ID="7"
[2025-11-21 21:26:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:26:53] ANSI_COLOR="0;31"
[2025-11-21 21:26:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:26:53] HOME_URL="https://www.centos.org/"
[2025-11-21 21:26:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:26:53] 
[2025-11-21 21:26:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:26:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:26:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:26:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:26:53] 
[2025-11-21 21:26:53] 2025-11-21 20:26:21,533 | INFO     | ***************************************
[2025-11-21 21:26:53] 2025-11-21 20:26:22,036 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 21:26:53] 2025-11-21 20:26:22,050 | INFO     | sufficient remaining disk space (245291286528 B)
[2025-11-21 21:26:53] 2025-11-21 20:26:22,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:26:53] 2025-11-21 20:26:22,051 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:26:53] 2025-11-21 20:26:22,051 | INFO     | update_server=False
[2025-11-21 21:26:53] 2025-11-21 20:26:22,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:26:53] 2025-11-21 20:26:22,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:26:53] 2025-11-21 20:26:22,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:26:53] 2025-11-21 20:26:22,197 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 21:26:53] 2025-11-21 20:26:22,197 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 21:26:53] 2025-11-21 20:26:22,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:26:53] 2025-11-21 20:26:22,198 | INFO     | will abort loop
[2025-11-21 21:26:53] 2025-11-21 20:26:22,422 | INFO     | all payload control threads have been joined
[2025-11-21 21:26:53] 2025-11-21 20:26:22,877 | INFO     | all data control threads have been joined
[2025-11-21 21:26:53] 2025-11-21 20:26:22,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:26:53] 2025-11-21 20:26:22,920 | INFO     | all job control threads have been joined
[2025-11-21 21:26:53] 2025-11-21 20:26:23,056 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,057 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,105 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,203 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,203 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,298 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,428 | INFO     | [payload] control thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,615 | INFO     | [job] validate thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,620 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,623 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,648 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,845 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,883 | INFO     | [data] control thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:23,926 | INFO     | [job] control thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:24,919 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:26,058 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:26:53] 2025-11-21 20:26:35,158 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:26:53] 2025-11-21 20:26:36,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649940358976)>', '<ExcThread(monitor, started 140649659598592)>']
[2025-11-21 21:26:53] 2025-11-21 20:26:41,449 | INFO     | all workflow threads have been joined
[2025-11-21 21:26:53] 2025-11-21 20:26:41,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:26:53] 2025-11-21 20:26:41,450 | INFO     | traces error code: 0
[2025-11-21 21:26:53] 2025-11-21 20:26:41,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:26:53] 2025-11-21 20:26:53,069 | INFO     | PID=3292383 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 21:26:53] 2025-11-21 20:26:53,070 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:26:53] 2025-11-21 20:26:53,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:26:53] 2025-11-21 20:26:53,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:26:53] 2025-11-21 20:26:53,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:26:53] 2025-11-21 20:26:53,070 | CRITICAL | thread 'MainThread' is not alive
[2025-11-21 21:26:53] 2025-11-21 20:26:53,070 | INFO     | [monitor] control thread has ended
[2025-11-21 21:26:53] 2025-11-21 20:26:53,118 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:26:53] 2025-11-21 20:26:53,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:26:53] 2025-11-21 20:26:53,123 [wrapper] pilotpid: 3292383
[2025-11-21 21:26:53] 2025-11-21 20:26:53,125 [wrapper] Pilot exit status: 0
[2025-11-21 21:26:53] 2025-11-21 20:26:53,132 [wrapper] pandaids: 6891591813
[2025-11-21 21:26:53] 2025-11-21 20:26:53,151 [wrapper] cleanup supervisor_pilot 3442362 3292384
[2025-11-21 21:26:53] 2025-11-21 20:26:53,153 [wrapper] Test setup, not cleaning
[2025-11-21 21:26:53] 2025-11-21 20:26:53,156 [wrapper] apfmon messages muted
[2025-11-21 21:26:53] 2025-11-21 20:26:53,158 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:26:53] 2025-11-21 20:26:53,160 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:26:53]  *** Error codes and diagnostics ***
[2025-11-21 21:26:53]     "exeErrorCode": 0,
[2025-11-21 21:26:53]     "exeErrorDiag": "",
[2025-11-21 21:26:53]     "pilotErrorCode": 0,
[2025-11-21 21:26:53]     "pilotErrorDiag": "",
[2025-11-21 21:26:53]  *** Listing of results directory ***
[2025-11-21 21:26:53] total 1304236
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc      5112 Nov 18 19:09 queuedata.json
[2025-11-21 21:26:53] -rwx------ 1 boinc boinc     36292 Nov 18 19:10 runpilot2-wrapper.sh
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc       100 Nov 21 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:26:53] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 13:32 run_atlas
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc       105 Nov 21 13:32 job.xml
[2025-11-21 21:26:53] -rw-r--r-- 2 boinc boinc 411563546 Nov 21 13:32 EVNT.47493065._000625.pool.root.1
[2025-11-21 21:26:53] drwxrwx--x 2 boinc boinc      4096 Nov 21 13:32 shared
[2025-11-21 21:26:53] -rw-r--r-- 2 boinc boinc    590098 Nov 21 13:32 input.tar.gz
[2025-11-21 21:26:53] -rw-r--r-- 2 boinc boinc     15120 Nov 21 13:32 start_atlas.sh
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc         0 Nov 21 13:32 boinc_setup_complete
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc      6438 Nov 21 13:32 init_data.xml
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc         0 Nov 21 13:32 boinc_lockfile
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc      2773 Nov 21 13:32 pandaJob.out
[2025-11-21 21:26:53] -rw------- 1 boinc boinc    989817 Nov 21 13:33 agis_schedconf.cvmfs.json
[2025-11-21 21:26:53] drwx------ 5 boinc boinc      4096 Nov 21 13:33 pilot3
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc       531 Nov 21 21:21 boinc_task_state.xml
[2025-11-21 21:26:53] -rw------- 1 boinc boinc 909689990 Nov 21 21:25 HITS.47493068._005745.pool.root.1
[2025-11-21 21:26:53] -rw------- 1 boinc boinc      1036 Nov 21 21:26 memory_monitor_summary.json
[2025-11-21 21:26:53] -rw------- 1 boinc boinc   1526164 Nov 21 21:26 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:26:53] -rw------- 1 boinc boinc   1168126 Nov 21 21:26 log.47493068._005745.job.log.tgz.1
[2025-11-21 21:26:53] -rw------- 1 boinc boinc      8578 Nov 21 21:26 heartbeat.json
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc        28 Nov 21 21:26 wrapper_checkpoint.txt
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc      8192 Nov 21 21:26 boinc_mmap_file
[2025-11-21 21:26:53] -rw------- 1 boinc boinc       817 Nov 21 21:26 pilotlog.txt
[2025-11-21 21:26:53] -rw------- 1 boinc boinc        95 Nov 21 21:26 pilot_heartbeat.json
[2025-11-21 21:26:53] -rw------- 1 boinc boinc   4011344 Nov 21 21:26 log.47493068._005745.job.log.1
[2025-11-21 21:26:53] -rw------- 1 boinc boinc       353 Nov 21 21:26 output.list
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc       620 Nov 21 21:26 runtime_log
[2025-11-21 21:26:53] -rw------- 1 boinc boinc   5201920 Nov 21 21:26 result.tar.gz
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc      8783 Nov 21 21:26 runtime_log.err
[2025-11-21 21:26:53] -rw------- 1 boinc boinc       667 Nov 21 21:26 oyINDmJLff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFCGKDmvoTe9m.diag
[2025-11-21 21:26:53] -rw-r--r-- 1 boinc boinc     21199 Nov 21 21:26 stderr.txt
[2025-11-21 21:26:53] HITS file was successfully produced:
[2025-11-21 21:26:53] -rw------- 1 boinc boinc 909689990 Nov 21 21:25 shared/HITS.pool.root.1
[2025-11-21 21:26:53]  *** Contents of shared directory: ***
[2025-11-21 21:26:53] total 1295976
[2025-11-21 21:26:53] -rw-r--r-- 2 boinc boinc 411563546 Nov 21 13:32 ATLAS.root_0
[2025-11-21 21:26:53] -rw-r--r-- 2 boinc boinc    590098 Nov 21 13:32 input.tar.gz
[2025-11-21 21:26:53] -rw-r--r-- 2 boinc boinc     15120 Nov 21 13:32 start_atlas.sh
[2025-11-21 21:26:53] -rw------- 1 boinc boinc 909689990 Nov 21 21:25 HITS.pool.root.1
[2025-11-21 21:26:53] -rw------- 1 boinc boinc   5201920 Nov 21 21:26 result.tar.gz
21:26:54 (3288652): run_atlas exited; CPU time 83713.940241
21:26:54 (3288652): called boinc_finish(0)

</stderr_txt>
]]>

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