Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:54:05 (4657): wrapper (7.7.26015): starting
22:54:05 (4657): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 22:54:05] Arguments: --nthreads 8
[2025-11-18 22:54:05] Threads: 8
[2025-11-18 22:54:05] Checking for CVMFS
[2025-11-18 22:54:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 22:54:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 22:54:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 22:54:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 22:54:05] 2.11.2.0 3643 55290 116992 153028 1 90 11239576 18432001 1885 130560 0 30091603 99.969 2269181 29412 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-18 22:54:05] CVMFS is ok
[2025-11-18 22:54:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 22:54:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 22:54:05] Further information can be found at the LHC@home message board.
[2025-11-18 22:54:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 22:54:05] Checking for apptainer binary...
[2025-11-18 22:54:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 22:54:05] Running /usr/bin/apptainer --version
[2025-11-18 22:54:05] apptainer version 1.3.2-1.el7
[2025-11-18 22:54:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 22:54:06] c-206-15.aglt2.org
[2025-11-18 22:54:06] apptainer works
[2025-11-18 22:54:06] Set ATHENA_PROC_NUMBER=8
[2025-11-18 22:54:06] Set ATHENA_CORE_NUMBER=8
[2025-11-18 22:54:06] Starting ATLAS job with PandaID=6891589187
[2025-11-18 22:54:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 18:20:20]  *** The last 200 lines of the pilot log: ***
[2025-11-19 18:20:20] 2025-11-19 23:19:14,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 18:20:20] 2025-11-19 23:19:14,447 | INFO     | time since job start (69896s) is within the limit (172800.0s)
[2025-11-19 18:20:20] 2025-11-19 23:19:14,447 | INFO     | 69898s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-19 18:20:20] 2025-11-19 23:19:16,174 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-19 18:20:20] 2025-11-19 23:19:16,180 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1645.9166666666667
[2025-11-19 18:20:20] 2025-11-19 23:19:16,184 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891589187/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,184 | INFO     | extracted standard info from prmon json
[2025-11-19 18:20:20] 2025-11-19 23:19:16,185 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 18:20:20] 2025-11-19 23:19:16,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 18:20:20] 2025-11-19 23:19:16,202 | INFO     | fitting pss+swap vs Time
[2025-11-19 18:20:20] 2025-11-19 23:19:16,203 | INFO     | sum of square deviations: 466691694838.3663
[2025-11-19 18:20:20] 2025-11-19 23:19:16,229 | INFO     | sum of deviations: 2504464549752.0215
[2025-11-19 18:20:20] 2025-11-19 23:19:16,229 | INFO     | mean x: 1763559407.1308901
[2025-11-19 18:20:20] 2025-11-19 23:19:16,230 | INFO     | mean y: 2860219.2931937175
[2025-11-19 18:20:20] 2025-11-19 23:19:16,230 | INFO     | intersect: -9461143673.19242
[2025-11-19 18:20:20] 2025-11-19 23:19:16,231 | INFO     | chi2: 5.7329699818651525
[2025-11-19 18:20:20] 2025-11-19 23:19:16,232 | INFO     | sum of square deviations: 460609968758.8684
[2025-11-19 18:20:20] 2025-11-19 23:19:16,257 | INFO     | sum of deviations: 2880901302607.8647
[2025-11-19 18:20:20] 2025-11-19 23:19:16,257 | INFO     | mean x: 1763559254.6336546
[2025-11-19 18:20:20] 2025-11-19 23:19:16,257 | INFO     | mean y: 2869654.456617003
[2025-11-19 18:20:20] 2025-11-19 23:19:16,257 | INFO     | intersect: -11027373932.303423
[2025-11-19 18:20:20] 2025-11-19 23:19:16,258 | INFO     | chi2: 2.5765841579209874
[2025-11-19 18:20:20] 2025-11-19 23:19:16,258 | INFO     | current chi2=2.5765841579209874 (change=55.05673034968994 %)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,259 | INFO     | sum of square deviations: 454581313441.8515
[2025-11-19 18:20:20] 2025-11-19 23:19:16,284 | INFO     | sum of deviations: 2887359653196.3545
[2025-11-19 18:20:20] 2025-11-19 23:19:16,285 | INFO     | mean x: 1763559102.1364436
[2025-11-19 18:20:20] 2025-11-19 23:19:16,285 | INFO     | mean y: 2869815.5783450706
[2025-11-19 18:20:20] 2025-11-19 23:19:16,285 | INFO     | intersect: -11198711171.070177
[2025-11-19 18:20:20] 2025-11-19 23:19:16,286 | INFO     | chi2: 2.515489952048841
[2025-11-19 18:20:20] 2025-11-19 23:19:16,286 | INFO     | current chi2=2.515489952048841 (change=2.37113178253189 %)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,286 | INFO     | right removable region: 1135
[2025-11-19 18:20:20] 2025-11-19 23:19:16,287 | INFO     | sum of square deviations: 460609527728.8684
[2025-11-19 18:20:20] 2025-11-19 23:19:16,312 | INFO     | sum of deviations: 2196389343672.7795
[2025-11-19 18:20:20] 2025-11-19 23:19:16,313 | INFO     | mean x: 1763559559.6336546
[2025-11-19 18:20:20] 2025-11-19 23:19:16,313 | INFO     | mean y: 2867935.87028922
[2025-11-19 18:20:20] 2025-11-19 23:19:16,313 | INFO     | intersect: -8406561723.152485
[2025-11-19 18:20:20] 2025-11-19 23:19:16,314 | INFO     | chi2: 3.607092704153973
[2025-11-19 18:20:20] 2025-11-19 23:19:16,314 | INFO     | current chi2=3.607092704153973 (change=37.08160490000596 %)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,315 | INFO     | sum of square deviations: 454580570462.39355
[2025-11-19 18:20:20] 2025-11-19 23:19:16,340 | INFO     | sum of deviations: 2100329440672.3462
[2025-11-19 18:20:20] 2025-11-19 23:19:16,340 | INFO     | mean x: 1763559712.1346831
[2025-11-19 18:20:20] 2025-11-19 23:19:16,340 | INFO     | mean y: 2870365.4225352113
[2025-11-19 18:20:20] 2025-11-19 23:19:16,340 | INFO     | intersect: -8145424182.257768
[2025-11-19 18:20:20] 2025-11-19 23:19:16,341 | INFO     | chi2: 3.5114721921181506
[2025-11-19 18:20:20] 2025-11-19 23:19:16,341 | INFO     | current chi2=3.5114721921181506 (change=2.650902537816804 %)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,341 | INFO     | left removable region: 20
[2025-11-19 18:20:20] 2025-11-19 23:19:16,343 | INFO     | sum of square deviations: 429834099666.78424
[2025-11-19 18:20:20] 2025-11-19 23:19:16,367 | INFO     | sum of deviations: 2335002121189.091
[2025-11-19 18:20:20] 2025-11-19 23:19:16,367 | INFO     | mean x: 1763559681.6403587
[2025-11-19 18:20:20] 2025-11-19 23:19:16,367 | INFO     | mean y: 2883774.5713004484
[2025-11-19 18:20:20] 2025-11-19 23:19:16,367 | INFO     | intersect: -9577360325.806225
[2025-11-19 18:20:20] 2025-11-19 23:19:16,368 | INFO     | chi2: 0.2033222415512168
[2025-11-19 18:20:20] 2025-11-19 23:19:16,368 | INFO     | current memory leak: 5.43 B/s (using 1115 data points, chi2=0.20)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | could have reported an average CPU frequency of 2605 MHz (41 samples)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | ..............................
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | . Timing measurements:
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | . get job = 0 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | . initial setup = 2 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | . payload setup = 5 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | . stage-in = 0 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,369 | INFO     | . payload execution = 69868 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,370 | INFO     | . stage-out = 3 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,370 | INFO     | . log creation = 0 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,370 | INFO     | ..............................
[2025-11-19 18:20:20] 2025-11-19 23:19:16,451 | INFO     | 
[2025-11-19 18:20:20] 2025-11-19 23:19:16,452 | INFO     | job summary report
[2025-11-19 18:20:20] 2025-11-19 23:19:16,452 | INFO     | --------------------------------------------------
[2025-11-19 18:20:20] 2025-11-19 23:19:16,452 | INFO     | PanDA job id: 6891589187
[2025-11-19 18:20:20] 2025-11-19 23:19:16,452 | INFO     | task id: 47493068
[2025-11-19 18:20:20] 2025-11-19 23:19:16,452 | INFO     | errors: (none)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 18:20:20] 2025-11-19 23:19:16,453 | INFO     | time since job start (69898s) is within the limit (172800.0s)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,453 | INFO     | pilot state: finished 
[2025-11-19 18:20:20] 2025-11-19 23:19:16,453 | INFO     | transexitcode: 0
[2025-11-19 18:20:20] 2025-11-19 23:19:16,453 | INFO     | exeerrorcode: 0
[2025-11-19 18:20:20] 2025-11-19 23:19:16,454 | INFO     | exeerrordiag: 
[2025-11-19 18:20:20] 2025-11-19 23:19:16,454 | INFO     | exitcode: 0
[2025-11-19 18:20:20] 2025-11-19 23:19:16,454 | INFO     | exitmsg: OK
[2025-11-19 18:20:20] 2025-11-19 23:19:16,454 | INFO     | cpuconsumptiontime: 537535 s
[2025-11-19 18:20:20] 2025-11-19 23:19:16,454 | INFO     | nevents: 1000
[2025-11-19 18:20:20] 2025-11-19 23:19:16,454 | INFO     | neventsw: 0
[2025-11-19 18:20:20] 2025-11-19 23:19:16,455 | INFO     | pid: 14895
[2025-11-19 18:20:20] 2025-11-19 23:19:16,455 | INFO     | pgrp: 14895
[2025-11-19 18:20:20] 2025-11-19 23:19:16,455 | INFO     | corecount: 8
[2025-11-19 18:20:20] 2025-11-19 23:19:16,455 | INFO     | event service: False
[2025-11-19 18:20:20] 2025-11-19 23:19:16,455 | INFO     | sizes: {0: 2296315, 1: 2297171, 2: 2297171, 5: 2297461, 12: 2297517, 69874: 2353973, 69877: 2363023, 69883: 2363309}
[2025-11-19 18:20:20] 2025-11-19 23:19:16,455 | INFO     | --------------------------------------------------
[2025-11-19 18:20:20] 2025-11-19 23:19:16,455 | INFO     | 
[2025-11-19 18:20:20] 2025-11-19 23:19:16,456 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-19 18:20:20] 2025-11-19 23:19:16,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 18:20:20] 2025-11-19 23:19:16,482 | INFO     | job 6891589187 has completed (purged errors)
[2025-11-19 18:20:20] 2025-11-19 23:19:16,483 | INFO     | overall cleanup function is called
[2025-11-19 18:20:20] 2025-11-19 23:19:17,492 | INFO     | --- collectZombieJob: --- 10, [14895]
[2025-11-19 18:20:20] 2025-11-19 23:19:17,492 | INFO     | zombie collector waiting for pid 14895
[2025-11-19 18:20:20] 2025-11-19 23:19:17,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 18:20:20] 2025-11-19 23:19:17,496 | INFO     | collected zombie processes
[2025-11-19 18:20:20] 2025-11-19 23:19:17,496 | INFO     | will attempt to kill all subprocesses of pid=14895
[2025-11-19 18:20:20] 2025-11-19 23:19:17,596 | INFO     | process IDs to be killed: [14895] (in reverse order)
[2025-11-19 18:20:20] 2025-11-19 23:19:17,647 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 18:20:20] 2025-11-19 23:19:17,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 18:20:20] 2025-11-19 23:19:17,651 | INFO     | did not find any defunct processes belonging to 14895
[2025-11-19 18:20:20] 2025-11-19 23:19:17,654 | INFO     | did not find any defunct processes belonging to 14895
[2025-11-19 18:20:20] 2025-11-19 23:19:17,656 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 18:20:20] 2025-11-19 23:19:17,656 | INFO     | ready for new job
[2025-11-19 18:20:20] 2025-11-19 23:19:17,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 18:20:20] 2025-11-19 23:19:17,660 | INFO     | ***************************************
[2025-11-19 18:20:20] 2025-11-19 23:19:17,660 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 18:20:20] 2025-11-19 23:19:17,660 | INFO     | ***************************************
[2025-11-19 18:20:20] 2025-11-19 23:19:17,661 | INFO     | 
[2025-11-19 18:20:20] 2025-11-19 23:19:17,661 | INFO     | architecture information:
[2025-11-19 18:20:20] 2025-11-19 23:19:17,662 | INFO     | executing command: cat /etc/os-release
[2025-11-19 18:20:20] 2025-11-19 23:19:17,677 | INFO     | cat /etc/os-release:
[2025-11-19 18:20:20] NAME="CentOS Linux"
[2025-11-19 18:20:20] VERSION="7 (Core)"
[2025-11-19 18:20:20] ID="centos"
[2025-11-19 18:20:20] ID_LIKE="rhel fedora"
[2025-11-19 18:20:20] VERSION_ID="7"
[2025-11-19 18:20:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 18:20:20] ANSI_COLOR="0;31"
[2025-11-19 18:20:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 18:20:20] HOME_URL="https://www.centos.org/"
[2025-11-19 18:20:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 18:20:20] 
[2025-11-19 18:20:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 18:20:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 18:20:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 18:20:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 18:20:20] 
[2025-11-19 18:20:20] 2025-11-19 23:19:17,677 | INFO     | ***************************************
[2025-11-19 18:20:20] 2025-11-19 23:19:18,180 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-19 18:20:20] 2025-11-19 23:19:18,197 | INFO     | sufficient remaining disk space (28074573824 B)
[2025-11-19 18:20:20] 2025-11-19 23:19:18,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 18:20:20] 2025-11-19 23:19:18,197 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 18:20:20] 2025-11-19 23:19:18,198 | INFO     | update_server=False
[2025-11-19 18:20:20] 2025-11-19 23:19:18,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 18:20:20] 2025-11-19 23:19:18,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 18:20:20] 2025-11-19 23:19:18,198 | INFO     | aborting loop
[2025-11-19 18:20:20] 2025-11-19 23:19:18,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 18:20:20] 2025-11-19 23:19:18,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 18:20:20] 2025-11-19 23:19:18,199 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-19 18:20:20] 2025-11-19 23:19:18,200 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 18:20:20] 2025-11-19 23:19:18,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 18:20:20] 2025-11-19 23:19:18,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 18:20:20] 2025-11-19 23:19:18,289 | INFO     | all data control threads have been joined
[2025-11-19 18:20:20] 2025-11-19 23:19:18,432 | INFO     | all payload control threads have been joined
[2025-11-19 18:20:20] 2025-11-19 23:19:18,530 | INFO     | all job control threads have been joined
[2025-11-19 18:20:20] 2025-11-19 23:19:19,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 18:20:20] 2025-11-19 23:19:19,203 | INFO     | [job] retrieve thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,204 | INFO     | [job] job monitor thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,205 | INFO     | [job] queue monitor thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,215 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,292 | INFO     | [data] control thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,433 | INFO     | [payload] control thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,496 | INFO     | [job] validate thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,534 | INFO     | [job] control thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,547 | INFO     | [data] copytool_in thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:19,645 | INFO     | [payload] failed_post thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:20,004 | INFO     | [payload] validate_post thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:20,165 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:20,219 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:20,655 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:21,178 | INFO     | [data] copytool_out thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:19:22,205 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 18:20:20] 2025-11-19 23:20:13,517 | INFO     | [monitor] cgroup control has ended
[2025-11-19 18:20:20] 2025-11-19 23:20:15,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645895137088)>', '<ExcThread(monitor, started 139645576779520)>']
[2025-11-19 18:20:20] 2025-11-19 23:20:15,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 18:20:20] 2025-11-19 23:20:15,435 | INFO     | [monitor] control thread has ended
[2025-11-19 18:20:20] 2025-11-19 23:20:20,440 | INFO     | all workflow threads have been joined
[2025-11-19 18:20:20] 2025-11-19 23:20:20,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 18:20:20] 2025-11-19 23:20:20,441 | INFO     | traces error code: 0
[2025-11-19 18:20:20] 2025-11-19 23:20:20,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 18:20:20] 2025-11-19 23:20:20,534 [wrapper] ==== pilot stdout END ====
[2025-11-19 18:20:20] 2025-11-19 23:20:20,538 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 18:20:20] 2025-11-19 23:20:20,542 [wrapper] pilotpid: 8344
[2025-11-19 18:20:20] 2025-11-19 23:20:20,546 [wrapper] Pilot exit status: 0
[2025-11-19 18:20:20] 2025-11-19 23:20:20,559 [wrapper] pandaids: 6891589187
[2025-11-19 18:20:20] 2025-11-19 23:20:20,605 [wrapper] cleanup supervisor_pilot 29746 8345
[2025-11-19 18:20:20] 2025-11-19 23:20:20,609 [wrapper] Test setup, not cleaning
[2025-11-19 18:20:20] 2025-11-19 23:20:20,613 [wrapper] apfmon messages muted
[2025-11-19 18:20:20] 2025-11-19 23:20:20,617 [wrapper] ==== wrapper stdout END ====
[2025-11-19 18:20:20] 2025-11-19 23:20:20,620 [wrapper] ==== wrapper stderr END ====
[2025-11-19 18:20:20]  *** Error codes and diagnostics ***
[2025-11-19 18:20:20]     "exeErrorCode": 0,
[2025-11-19 18:20:20]     "exeErrorDiag": "",
[2025-11-19 18:20:20]     "pilotErrorCode": 0,
[2025-11-19 18:20:20]     "pilotErrorDiag": "",
[2025-11-19 18:20:20]  *** Listing of results directory ***
[2025-11-19 18:20:20] total 1322956
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 12:40 queuedata.json
[2025-11-19 18:20:20] -rwx------ 1 boincer umatlas     36292 Nov 18 12:43 runpilot2-wrapper.sh
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas       100 Nov 18 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 18:20:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 18 22:53 run_atlas
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas       105 Nov 18 22:53 job.xml
[2025-11-19 18:20:20] -rw-r--r-- 2 boincer umatlas 411222388 Nov 18 22:54 EVNT.47493065._000525.pool.root.1
[2025-11-19 18:20:20] -rw-r--r-- 2 boincer umatlas     15120 Nov 18 22:54 start_atlas.sh
[2025-11-19 18:20:20] drwxrwx--x 2 boincer umatlas      4096 Nov 18 22:54 shared
[2025-11-19 18:20:20] -rw-r--r-- 2 boincer umatlas    590095 Nov 18 22:54 input.tar.gz
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas         0 Nov 18 22:54 boinc_lockfile
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas      2769 Nov 18 22:54 pandaJob.out
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas    992806 Nov 18 22:54 agis_schedconf.cvmfs.json
[2025-11-19 18:20:20] drwx------ 5 boincer umatlas      4096 Nov 18 22:54 pilot3
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas       533 Nov 19 18:12 boinc_task_state.xml
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas      5952 Nov 19 18:18 init_data.xml
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas 915554973 Nov 19 18:18 HITS.47493068._005241.pool.root.1
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas      1066 Nov 19 18:19 memory_monitor_summary.json
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas        95 Nov 19 18:19 pilot_heartbeat.json
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas   1525063 Nov 19 18:19 agis_ddmendpoints.agis.ALL.json
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas   2307271 Nov 19 18:19 log.47493068._005241.job.log.tgz.1
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas      8663 Nov 19 18:19 heartbeat.json
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 19 18:20 boinc_mmap_file
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas        29 Nov 19 18:20 wrapper_checkpoint.txt
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas      4552 Nov 19 18:20 pilotlog.txt
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas   9690466 Nov 19 18:20 log.47493068._005241.job.log.1
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas       353 Nov 19 18:20 output.list
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas       620 Nov 19 18:20 runtime_log
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas  12021760 Nov 19 18:20 result.tar.gz
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas      8704 Nov 19 18:20 runtime_log.err
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas       668 Nov 19 18:20 fnSKDmiuef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZ7FKDmfDp5Vo.diag
[2025-11-19 18:20:20] -rw-r--r-- 1 boincer umatlas     21266 Nov 19 18:20 stderr.txt
[2025-11-19 18:20:20] HITS file was successfully produced:
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas 915554973 Nov 19 18:18 shared/HITS.pool.root.1
[2025-11-19 18:20:20]  *** Contents of shared directory: ***
[2025-11-19 18:20:20] total 1308032
[2025-11-19 18:20:20] -rw-r--r-- 2 boincer umatlas 411222388 Nov 18 22:54 ATLAS.root_0
[2025-11-19 18:20:20] -rw-r--r-- 2 boincer umatlas     15120 Nov 18 22:54 start_atlas.sh
[2025-11-19 18:20:20] -rw-r--r-- 2 boincer umatlas    590095 Nov 18 22:54 input.tar.gz
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas 915554973 Nov 19 18:18 HITS.pool.root.1
[2025-11-19 18:20:20] -rw------- 1 boincer umatlas  12021760 Nov 19 18:20 result.tar.gz
18:20:22 (4657): run_atlas exited; CPU time 535935.782098
18:20:22 (4657): called boinc_finish(0)

</stderr_txt>
]]>

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