Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:47 (2594239): wrapper (7.7.26015): starting
19:12:47 (2594239): wrapper: running run_atlas (--nthreads 2)
[2025-11-20 19:12:47] Arguments: --nthreads 2
[2025-11-20 19:12:47] Threads: 2
[2025-11-20 19:12:47] Checking for CVMFS
[2025-11-20 19:12:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:12:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:12:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:12:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:12:47] 2.9.2.0 2254411 2966 55648 153088 1 81 35359941 36864001 0 130560 0 945665 99.784 281589 6844 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 19:12:47] CVMFS is ok
[2025-11-20 19:12:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 19:12:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 19:12:47] Further information can be found at the LHC@home message board.
[2025-11-20 19:12:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:12:47] Checking for apptainer binary...
[2025-11-20 19:12:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:12:47] Running /usr/bin/apptainer --version
[2025-11-20 19:12:47] apptainer version 1.4.1-1.1
[2025-11-20 19:12:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:12:47] thA331
[2025-11-20 19:12:47] apptainer works
[2025-11-20 19:12:47] Set ATHENA_PROC_NUMBER=2
[2025-11-20 19:12:47] Set ATHENA_CORE_NUMBER=2
[2025-11-20 19:12:47] Starting ATLAS job with PandaID=6891602978
[2025-11-20 19:12:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 07:53:14]  *** The last 200 lines of the pilot log: ***
[2025-11-21 07:53:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 07:53:14] 
[2025-11-21 07:53:14] 2025-11-21 06:52:22,236 | INFO     | ***************************************
[2025-11-21 07:53:14] 2025-11-21 06:52:22,739 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | INFO     | sufficient remaining disk space (222114611200 B)
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | INFO     | update_server=False
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 07:53:14] 2025-11-21 06:52:22,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 07:53:14] 2025-11-21 06:52:22,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:53:14] 2025-11-21 06:52:22,769 | INFO     | all data control threads have been joined
[2025-11-21 07:53:14] 2025-11-21 06:52:22,951 | INFO     | all job control threads have been joined
[2025-11-21 07:53:14] 2025-11-21 06:52:23,140 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 07:53:14] 2025-11-21 06:52:23,141 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 07:53:14] 2025-11-21 06:52:23,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:53:14] 2025-11-21 06:52:23,141 | INFO     | will abort loop
[2025-11-21 07:53:14] 2025-11-21 06:52:23,673 | INFO     | all payload control threads have been joined
[2025-11-21 07:53:14] 2025-11-21 06:52:23,756 | INFO     | [job] retrieve thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:23,756 | INFO     | [job] queue monitor thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:23,775 | INFO     | [data] control thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:23,871 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:23,927 | INFO     | [data] copytool_in thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:23,957 | INFO     | [job] control thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:24,017 | INFO     | [payload] failed_post thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:24,147 | INFO     | [job] job monitor thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:24,675 | INFO     | [payload] control thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:24,758 | INFO     | [data] copytool_out thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:24,806 | INFO     | [payload] validate_post thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:24,939 | INFO     | [job] validate thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:25,151 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:25,203 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:26,758 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:52:33,464 | INFO     | job.realtimelogging is not enabled
[2025-11-21 07:53:14] 2025-11-21 06:52:34,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 07:53:14] 2025-11-21 06:53:08,473 | INFO     | [monitor] cgroup control has ended
[2025-11-21 07:53:14] 2025-11-21 06:53:09,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435459766080)>', '<ExcThread(monitor, started 140434642802432)>']
[2025-11-21 07:53:14] 2025-11-21 06:53:09,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 07:53:14] 2025-11-21 06:53:09,980 | INFO     | [monitor] control thread has ended
[2025-11-21 07:53:14] 2025-11-21 06:53:14,631 | INFO     | all workflow threads have been joined
[2025-11-21 07:53:14] 2025-11-21 06:53:14,632 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 07:53:14] 2025-11-21 06:53:14,632 | INFO     | traces error code: 0
[2025-11-21 07:53:14] 2025-11-21 06:53:14,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 07:53:14] 2025-11-21 06:53:14,675 [wrapper] ==== pilot stdout END ====
[2025-11-21 07:53:14] 2025-11-21 06:53:14,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 07:53:14] 2025-11-21 06:53:14,680 [wrapper] pilotpid: 2597947
[2025-11-21 07:53:14] 2025-11-21 06:53:14,682 [wrapper] Pilot exit status: 0
[2025-11-21 07:53:14] 2025-11-21 06:53:14,687 [wrapper] pandaids: 6891602978
[2025-11-21 07:53:14] 2025-11-21 06:53:14,701 [wrapper] cleanup supervisor_pilot 2677598 2597948
[2025-11-21 07:53:14] 2025-11-21 06:53:14,704 [wrapper] Test setup, not cleaning
[2025-11-21 07:53:14] 2025-11-21 06:53:14,706 [wrapper] apfmon messages muted
[2025-11-21 07:53:14] 2025-11-21 06:53:14,708 [wrapper] ==== wrapper stdout END ====
[2025-11-21 07:53:14] 2025-11-21 06:53:14,710 [wrapper] ==== wrapper stderr END ====
[2025-11-21 07:53:14]  *** Error codes and diagnostics ***
[2025-11-21 07:53:14]     "exeErrorCode": 0,
[2025-11-21 07:53:14]     "exeErrorDiag": "",
[2025-11-21 07:53:14]     "pilotErrorCode": 0,
[2025-11-21 07:53:14]     "pilotErrorDiag": "",
[2025-11-21 07:53:14]  *** Listing of results directory ***
[2025-11-21 07:53:14] total 1327140
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc    576529 Nov 18 20:21 pilot3.tar.gz
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc      5112 Nov 18 20:32 queuedata.json
[2025-11-21 07:53:14] -rwx------ 1 boinc boinc     36292 Nov 18 20:33 runpilot2-wrapper.sh
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc       100 Nov 20 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 07:53:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 19:12 run_atlas
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc       105 Nov 20 19:12 job.xml
[2025-11-21 07:53:14] -rw-r--r-- 2 boinc boinc 408836188 Nov 20 19:12 EVNT.47493065._000951.pool.root.1
[2025-11-21 07:53:14] -rw-r--r-- 2 boinc boinc    590103 Nov 20 19:12 input.tar.gz
[2025-11-21 07:53:14] -rw-r--r-- 2 boinc boinc     15120 Nov 20 19:12 start_atlas.sh
[2025-11-21 07:53:14] drwxrwx--x 2 boinc boinc      4096 Nov 20 19:12 shared
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc         0 Nov 20 19:12 boinc_setup_complete
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc      6205 Nov 20 19:12 init_data.xml
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc         0 Nov 20 19:12 boinc_lockfile
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc      2773 Nov 20 19:12 pandaJob.out
[2025-11-21 07:53:14] -rw------- 1 boinc boinc    989440 Nov 20 19:13 agis_schedconf.cvmfs.json
[2025-11-21 07:53:14] drwx------ 5 boinc boinc      4096 Nov 20 19:13 pilot3
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc       531 Nov 21 07:48 boinc_task_state.xml
[2025-11-21 07:53:14] -rw------- 1 boinc boinc 931001786 Nov 21 07:51 HITS.47493068._007403.pool.root.1
[2025-11-21 07:53:14] -rw------- 1 boinc boinc      1029 Nov 21 07:52 memory_monitor_summary.json
[2025-11-21 07:53:14] -rw------- 1 boinc boinc   1526164 Nov 21 07:52 agis_ddmendpoints.agis.ALL.json
[2025-11-21 07:53:14] -rw------- 1 boinc boinc   1231788 Nov 21 07:52 log.47493068._007403.job.log.tgz.1
[2025-11-21 07:53:14] -rw------- 1 boinc boinc        95 Nov 21 07:52 pilot_heartbeat.json
[2025-11-21 07:53:14] -rw------- 1 boinc boinc      8581 Nov 21 07:52 heartbeat.json
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc      8192 Nov 21 07:52 boinc_mmap_file
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc        28 Nov 21 07:52 wrapper_checkpoint.txt
[2025-11-21 07:53:14] -rw------- 1 boinc boinc      4814 Nov 21 07:53 pilotlog.txt
[2025-11-21 07:53:14] -rw------- 1 boinc boinc   6392205 Nov 21 07:53 log.47493068._007403.job.log.1
[2025-11-21 07:53:14] -rw------- 1 boinc boinc       353 Nov 21 07:53 output.list
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc       620 Nov 21 07:53 runtime_log
[2025-11-21 07:53:14] -rw------- 1 boinc boinc   7639040 Nov 21 07:53 result.tar.gz
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc      8778 Nov 21 07:53 runtime_log.err
[2025-11-21 07:53:14] -rw------- 1 boinc boinc       666 Nov 21 07:53 NIQLDmgdgf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcnFKDmy1Dsin.diag
[2025-11-21 07:53:14] -rw-r--r-- 1 boinc boinc      8287 Nov 21 07:53 stderr.txt
[2025-11-21 07:53:14] HITS file was successfully produced:
[2025-11-21 07:53:14] -rw------- 1 boinc boinc 931001786 Nov 21 07:51 shared/HITS.pool.root.1
[2025-11-21 07:53:14]  *** Contents of shared directory: ***
[2025-11-21 07:53:14] total 1316504
[2025-11-21 07:53:14] -rw-r--r-- 2 boinc boinc 408836188 Nov 20 19:12 ATLAS.root_0
[2025-11-21 07:53:14] -rw-r--r-- 2 boinc boinc    590103 Nov 20 19:12 input.tar.gz
[2025-11-21 07:53:14] -rw-r--r-- 2 boinc boinc     15120 Nov 20 19:12 start_atlas.sh
[2025-11-21 07:53:14] -rw------- 1 boinc boinc 931001786 Nov 21 07:51 HITS.pool.root.1
[2025-11-21 07:53:14] -rw------- 1 boinc boinc   7639040 Nov 21 07:53 result.tar.gz
07:53:16 (2594239): run_atlas exited; CPU time 90344.306762
07:53:16 (2594239): called boinc_finish(0)

</stderr_txt>
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