Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:49:52 (3278701): wrapper (7.7.26015): starting
11:49:52 (3278701): wrapper: running run_atlas (--nthreads 2)
[2025-11-23 11:49:52] Arguments: --nthreads 2
[2025-11-23 11:49:52] Threads: 2
[2025-11-23 11:49:52] Checking for CVMFS
[2025-11-23 11:49:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:49:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:49:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:49:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:49:52] 2.9.2.0 3000266 2241 53992 153205 3 81 35270896 36864001 0 130560 0 718902 99.977 81777 20818 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 11:49:52] CVMFS is ok
[2025-11-23 11:49:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:49:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:49:52] Further information can be found at the LHC@home message board.
[2025-11-23 11:49:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:49:52] Checking for apptainer binary...
[2025-11-23 11:49:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:49:52] Running /usr/bin/apptainer --version
[2025-11-23 11:49:52] apptainer version 1.4.1-1.1
[2025-11-23 11:49:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:49:53] thA310
[2025-11-23 11:49:53] apptainer works
[2025-11-23 11:49:53] Set ATHENA_PROC_NUMBER=2
[2025-11-23 11:49:53] Set ATHENA_CORE_NUMBER=2
[2025-11-23 11:49:53] Starting ATLAS job with PandaID=6891602396
[2025-11-23 11:49:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:32:18]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:32:18] 2025-11-23 23:31:16,317 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:32:18] 2025-11-23 23:31:16,317 | INFO     | update_server=False
[2025-11-24 00:32:18] 2025-11-23 23:31:16,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:32:18] 2025-11-23 23:31:16,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:32:18] 2025-11-23 23:31:16,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:32:18] 2025-11-23 23:31:16,745 | INFO     | all payload control threads have been joined
[2025-11-24 00:32:18] 2025-11-23 23:31:16,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:32:18] 2025-11-23 23:31:16,758 | INFO     | aborting loop
[2025-11-24 00:32:18] 2025-11-23 23:31:16,833 | INFO     | all job control threads have been joined
[2025-11-24 00:32:18] 2025-11-23 23:31:17,250 | INFO     | all data control threads have been joined
[2025-11-24 00:32:18] 2025-11-23 23:31:17,323 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:17,324 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:17,693 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:17,746 | INFO     | [payload] control thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:17,764 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:17,839 | INFO     | [job] control thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:32:18] 2025-11-23 23:31:18,178 | INFO     | [job] validate thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,256 | INFO     | [data] control thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,333 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,336 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,420 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,673 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,711 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:18,751 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:22,086 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:32:18] 2025-11-23 23:31:46,042 | INFO     | PID=3282415 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:32:18] 2025-11-23 23:31:46,042 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:32:18] 2025-11-23 23:31:46,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:32:18] 2025-11-23 23:31:46,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:32:18] 2025-11-23 23:32:11,142 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:32:18] 2025-11-23 23:32:13,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669038077760)>', '<ExcThread(monitor, started 140668097787648)>']
[2025-11-24 00:32:18] 2025-11-23 23:32:14,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:32:18] 2025-11-23 23:32:14,190 | INFO     | [monitor] control thread has ended
[2025-11-24 00:32:18] 2025-11-23 23:32:18,230 | INFO     | all workflow threads have been joined
[2025-11-24 00:32:18] 2025-11-23 23:32:18,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:32:18] 2025-11-23 23:32:18,231 | INFO     | traces error code: 0
[2025-11-24 00:32:18] 2025-11-23 23:32:18,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:32:18] 2025-11-23 23:32:18,276 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:32:18] 2025-11-23 23:32:18,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:32:18] 2025-11-23 23:32:18,280 [wrapper] pilotpid: 3282415
[2025-11-24 00:32:18] 2025-11-23 23:32:18,282 [wrapper] Pilot exit status: 0
[2025-11-24 00:32:18] 2025-11-23 23:32:18,288 [wrapper] pandaids: 6891602396
[2025-11-24 00:32:18] 2025-11-23 23:32:18,302 [wrapper] cleanup supervisor_pilot 3369376 3282416
[2025-11-24 00:32:18] 2025-11-23 23:32:18,304 [wrapper] Test setup, not cleaning
[2025-11-24 00:32:18] 2025-11-23 23:32:18,306 [wrapper] apfmon messages muted
[2025-11-24 00:32:18] 2025-11-23 23:32:18,308 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:32:18] 2025-11-23 23:32:18,310 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:32:18]  *** Error codes and diagnostics ***
[2025-11-24 00:32:18]     "exeErrorCode": 0,
[2025-11-24 00:32:18]     "exeErrorDiag": "",
[2025-11-24 00:32:18]     "pilotErrorCode": 0,
[2025-11-24 00:32:18]     "pilotErrorDiag": "",
[2025-11-24 00:32:18]  *** Listing of results directory ***
[2025-11-24 00:32:18] total 1323552
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc    576529 Nov 18 20:21 pilot3.tar.gz
[2025-11-24 00:32:18] -rwx------ 1 boinc boinc     36292 Nov 18 20:26 runpilot2-wrapper.sh
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc      5112 Nov 18 20:26 queuedata.json
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc       100 Nov 23 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:32:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 11:49 run_atlas
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc       105 Nov 23 11:49 job.xml
[2025-11-24 00:32:18] -rw-r--r-- 2 boinc boinc 410413960 Nov 23 11:49 EVNT.47493065._000919.pool.root.1
[2025-11-24 00:32:18] drwxrwx--x 2 boinc boinc      4096 Nov 23 11:49 shared
[2025-11-24 00:32:18] -rw-r--r-- 2 boinc boinc    590102 Nov 23 11:49 input.tar.gz
[2025-11-24 00:32:18] -rw-r--r-- 2 boinc boinc     15120 Nov 23 11:49 start_atlas.sh
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:49 boinc_setup_complete
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc      6206 Nov 23 11:49 init_data.xml
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:49 boinc_lockfile
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc      2770 Nov 23 11:49 pandaJob.out
[2025-11-24 00:32:18] -rw------- 1 boinc boinc    989784 Nov 23 11:50 agis_schedconf.cvmfs.json
[2025-11-24 00:32:18] drwx------ 5 boinc boinc      4096 Nov 23 11:50 pilot3
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc       531 Nov 24 00:25 boinc_task_state.xml
[2025-11-24 00:32:18] -rw------- 1 boinc boinc 925735068 Nov 24 00:30 HITS.47493068._007331.pool.root.1
[2025-11-24 00:32:18] -rw------- 1 boinc boinc      1023 Nov 24 00:31 memory_monitor_summary.json
[2025-11-24 00:32:18] -rw------- 1 boinc boinc   1526164 Nov 24 00:31 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:32:18] -rw------- 1 boinc boinc   1229623 Nov 24 00:31 log.47493068._007331.job.log.tgz.1
[2025-11-24 00:32:18] -rw------- 1 boinc boinc        95 Nov 24 00:31 pilot_heartbeat.json
[2025-11-24 00:32:18] -rw------- 1 boinc boinc      8555 Nov 24 00:31 heartbeat.json
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc      8192 Nov 24 00:32 boinc_mmap_file
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc        28 Nov 24 00:32 wrapper_checkpoint.txt
[2025-11-24 00:32:18] -rw------- 1 boinc boinc      4752 Nov 24 00:32 pilotlog.txt
[2025-11-24 00:32:18] -rw------- 1 boinc boinc   6401587 Nov 24 00:32 log.47493068._007331.job.log.1
[2025-11-24 00:32:18] -rw------- 1 boinc boinc       353 Nov 24 00:32 output.list
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc       620 Nov 24 00:32 runtime_log
[2025-11-24 00:32:18] -rw------- 1 boinc boinc   7649280 Nov 24 00:32 result.tar.gz
[2025-11-24 00:32:18] -rw------- 1 boinc boinc       665 Nov 24 00:32 ze6MDmWWgf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMnFKDmNOOBTm.diag
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc      8778 Nov 24 00:32 runtime_log.err
[2025-11-24 00:32:18] -rw-r--r-- 1 boinc boinc      7517 Nov 24 00:32 stderr.txt
[2025-11-24 00:32:18] HITS file was successfully produced:
[2025-11-24 00:32:18] -rw------- 1 boinc boinc 925735068 Nov 24 00:30 shared/HITS.pool.root.1
[2025-11-24 00:32:18]  *** Contents of shared directory: ***
[2025-11-24 00:32:18] total 1312912
[2025-11-24 00:32:18] -rw-r--r-- 2 boinc boinc 410413960 Nov 23 11:49 ATLAS.root_0
[2025-11-24 00:32:18] -rw-r--r-- 2 boinc boinc    590102 Nov 23 11:49 input.tar.gz
[2025-11-24 00:32:18] -rw-r--r-- 2 boinc boinc     15120 Nov 23 11:49 start_atlas.sh
[2025-11-24 00:32:18] -rw------- 1 boinc boinc 925735068 Nov 24 00:30 HITS.pool.root.1
[2025-11-24 00:32:18] -rw------- 1 boinc boinc   7649280 Nov 24 00:32 result.tar.gz
00:32:19 (3278701): run_atlas exited; CPU time 90384.846913
00:32:19 (3278701): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN