Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:14:01 (819060): wrapper (7.7.26015): starting
19:14:01 (819060): wrapper: running run_atlas (--nthreads 3)
[2025-11-20 19:14:01] Arguments: --nthreads 3
[2025-11-20 19:14:01] Threads: 3
[2025-11-20 19:14:01] Checking for CVMFS
[2025-11-20 19:14:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:14:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:14:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:14:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:14:01] 2.9.2.0 417779 2957 71412 153088 3 81 9159561 36864001 0 130560 0 1095543 99.808 284493 9613 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 19:14:01] CVMFS is ok
[2025-11-20 19:14:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 19:14:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 19:14:01] Further information can be found at the LHC@home message board.
[2025-11-20 19:14:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:14:01] Checking for apptainer binary...
[2025-11-20 19:14:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:14:01] Running /usr/bin/apptainer --version
[2025-11-20 19:14:01] apptainer version 1.4.1-1.1
[2025-11-20 19:14:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:14:02] cosA121b
[2025-11-20 19:14:02] apptainer works
[2025-11-20 19:14:02] Set ATHENA_PROC_NUMBER=3
[2025-11-20 19:14:02] Set ATHENA_CORE_NUMBER=3
[2025-11-20 19:14:02] Starting ATLAS job with PandaID=6891569955
[2025-11-20 19:14:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 03:32:08]  *** The last 200 lines of the pilot log: ***
[2025-11-21 03:32:08] 2025-11-21 02:31:34,989 | INFO     | time since job start (29847s) is within the limit (172800.0s)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,068 | INFO     | PID=822784 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 03:32:08] 2025-11-21 02:31:36,650 | INFO     | monitor loop #2269: job 0:6891569955 is in state 'finished'
[2025-11-21 03:32:08] 2025-11-21 02:31:36,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,862 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 03:32:08] 2025-11-21 02:31:36,863 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3595.7700000000004
[2025-11-21 03:32:08] 2025-11-21 02:31:36,864 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891569955/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,864 | INFO     | extracted standard info from prmon json
[2025-11-21 03:32:08] 2025-11-21 02:31:36,864 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 03:32:08] 2025-11-21 02:31:36,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 03:32:08] 2025-11-21 02:31:36,867 | INFO     | fitting pss+swap vs Time
[2025-11-21 03:32:08] 2025-11-21 02:31:36,867 | INFO     | sum of square deviations: 36257944940.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,870 | INFO     | sum of deviations: 98967033118.99998
[2025-11-21 03:32:08] 2025-11-21 02:31:36,870 | INFO     | mean x: 1763677351.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,870 | INFO     | mean y: 2185093.425357873
[2025-11-21 03:32:08] 2025-11-21 02:31:36,870 | INFO     | intersect: -4811819536.359574
[2025-11-21 03:32:08] 2025-11-21 02:31:36,870 | INFO     | chi2: 3.2853112964317353
[2025-11-21 03:32:08] 2025-11-21 02:31:36,870 | INFO     | sum of square deviations: 35157068485.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,872 | INFO     | sum of deviations: 143458530467.99988
[2025-11-21 03:32:08] 2025-11-21 02:31:36,872 | INFO     | mean x: 1763677198.5
[2025-11-21 03:32:08] 2025-11-21 02:31:36,872 | INFO     | mean y: 2191220.384297521
[2025-11-21 03:32:08] 2025-11-21 02:31:36,872 | INFO     | intersect: -7194499232.480943
[2025-11-21 03:32:08] 2025-11-21 02:31:36,872 | INFO     | chi2: 2.399313018034635
[2025-11-21 03:32:08] 2025-11-21 02:31:36,872 | INFO     | current chi2=2.399313018034635 (change=26.96847264852517 %)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,873 | INFO     | sum of square deviations: 34078704080.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,874 | INFO     | sum of deviations: 141694407234.99997
[2025-11-21 03:32:08] 2025-11-21 02:31:36,874 | INFO     | mean x: 1763677046.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,874 | INFO     | mean y: 2190970.962421712
[2025-11-21 03:32:08] 2025-11-21 02:31:36,874 | INFO     | intersect: -7330927477.447363
[2025-11-21 03:32:08] 2025-11-21 02:31:36,875 | INFO     | chi2: 2.399314946268873
[2025-11-21 03:32:08] 2025-11-21 02:31:36,875 | INFO     | current chi2=2.399314946268873 (change=-8.036609744389484e-05 %)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,875 | INFO     | right removable region: 478
[2025-11-21 03:32:08] 2025-11-21 02:31:36,875 | INFO     | sum of square deviations: 35157068485.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,877 | INFO     | sum of deviations: -1273378781.999981
[2025-11-21 03:32:08] 2025-11-21 02:31:36,877 | INFO     | mean x: 1763677503.5
[2025-11-21 03:32:08] 2025-11-21 02:31:36,877 | INFO     | mean y: 2198959.119834711
[2025-11-21 03:32:08] 2025-11-21 02:31:36,877 | INFO     | intersect: 66078844.67416628
[2025-11-21 03:32:08] 2025-11-21 02:31:36,877 | INFO     | chi2: 1.1809055953931074
[2025-11-21 03:32:08] 2025-11-21 02:31:36,877 | INFO     | current chi2=1.1809055953931074 (change=64.05498630599418 %)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,877 | INFO     | sum of square deviations: 34078704080.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,879 | INFO     | sum of deviations: -25013237269.99999
[2025-11-21 03:32:08] 2025-11-21 02:31:36,879 | INFO     | mean x: 1763677656.0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,879 | INFO     | mean y: 2202303.06263048
[2025-11-21 03:32:08] 2025-11-21 02:31:36,879 | INFO     | intersect: 1296714194.5290565
[2025-11-21 03:32:08] 2025-11-21 02:31:36,879 | INFO     | chi2: 0.9945547332415694
[2025-11-21 03:32:08] 2025-11-21 02:31:36,879 | INFO     | current chi2=0.9945547332415694 (change=15.780335267994417 %)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,879 | INFO     | left removable region: 20
[2025-11-21 03:32:08] 2025-11-21 02:31:36,880 | INFO     | sum of square deviations: 29790156694.5
[2025-11-21 03:32:08] 2025-11-21 02:31:36,881 | INFO     | sum of deviations: 3432329333.999995
[2025-11-21 03:32:08] 2025-11-21 02:31:36,881 | INFO     | mean x: 1763677625.5
[2025-11-21 03:32:08] 2025-11-21 02:31:36,881 | INFO     | mean y: 2211048.943231441
[2025-11-21 03:32:08] 2025-11-21 02:31:36,881 | INFO     | intersect: -200994409.5510751
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | chi2: 0.07773738755919257
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | current memory leak: 0.12 B/s (using 458 data points, chi2=0.08)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | could have reported an average CPU frequency of 3989 MHz (20 samples)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | ..............................
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . Timing measurements:
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . get job = 0 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . initial setup = 1 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . payload setup = 3 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . stage-in = 0 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . payload execution = 29824 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . stage-out = 0 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | . log creation = 0 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,882 | INFO     | ..............................
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | 
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | job summary report
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | --------------------------------------------------
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | PanDA job id: 6891569955
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | task id: 47493068
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | errors: (none)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | pilot state: finished 
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | transexitcode: 0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | exeerrorcode: 0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,912 | INFO     | exeerrordiag: 
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | exitcode: 0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | exitmsg: OK
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | cpuconsumptiontime: 88262 s
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | nevents: 1000
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | neventsw: 0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | pid: 829227
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | pgrp: 829227
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | corecount: 3
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | event service: False
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | sizes: {0: 2298628, 1: 2298827, 3: 2299089, 11: 2299117, 29831: 2338488, 29832: 2347488, 29833: 2347672, 29837: 2347918}
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | --------------------------------------------------
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | 
[2025-11-21 03:32:08] 2025-11-21 02:31:36,913 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-21 03:32:08] 2025-11-21 02:31:36,926 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | job 6891569955 has completed (purged errors)
[2025-11-21 03:32:08] 2025-11-21 02:31:36,927 | INFO     | overall cleanup function is called
[2025-11-21 03:32:08] 2025-11-21 02:31:37,936 | INFO     | --- collectZombieJob: --- 10, [829227]
[2025-11-21 03:32:08] 2025-11-21 02:31:37,936 | INFO     | zombie collector waiting for pid 829227
[2025-11-21 03:32:08] 2025-11-21 02:31:37,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 03:32:08] 2025-11-21 02:31:37,936 | INFO     | collected zombie processes
[2025-11-21 03:32:08] 2025-11-21 02:31:37,936 | INFO     | will attempt to kill all subprocesses of pid=829227
[2025-11-21 03:32:08] 2025-11-21 02:31:37,993 | INFO     | process IDs to be killed: [829227] (in reverse order)
[2025-11-21 03:32:08] 2025-11-21 02:31:38,024 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 03:32:08] 2025-11-21 02:31:38,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 03:32:08] 2025-11-21 02:31:38,025 | INFO     | did not find any defunct processes belonging to 829227
[2025-11-21 03:32:08] 2025-11-21 02:31:38,027 | INFO     | did not find any defunct processes belonging to 829227
[2025-11-21 03:32:08] 2025-11-21 02:31:38,027 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 03:32:08] 2025-11-21 02:31:38,027 | INFO     | ready for new job
[2025-11-21 03:32:08] 2025-11-21 02:31:38,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 03:32:08] 2025-11-21 02:31:38,028 | INFO     | ***************************************
[2025-11-21 03:32:08] 2025-11-21 02:31:38,028 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 03:32:08] 2025-11-21 02:31:38,028 | INFO     | ***************************************
[2025-11-21 03:32:08] 2025-11-21 02:31:38,028 | INFO     | 
[2025-11-21 03:32:08] 2025-11-21 02:31:38,029 | INFO     | architecture information:
[2025-11-21 03:32:08] 2025-11-21 02:31:38,029 | INFO     | executing command: cat /etc/os-release
[2025-11-21 03:32:08] 2025-11-21 02:31:38,038 | INFO     | cat /etc/os-release:
[2025-11-21 03:32:08] NAME="CentOS Linux"
[2025-11-21 03:32:08] VERSION="7 (Core)"
[2025-11-21 03:32:08] ID="centos"
[2025-11-21 03:32:08] ID_LIKE="rhel fedora"
[2025-11-21 03:32:08] VERSION_ID="7"
[2025-11-21 03:32:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 03:32:08] ANSI_COLOR="0;31"
[2025-11-21 03:32:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 03:32:08] HOME_URL="https://www.centos.org/"
[2025-11-21 03:32:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 03:32:08] 
[2025-11-21 03:32:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 03:32:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 03:32:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 03:32:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 03:32:08] 
[2025-11-21 03:32:08] 2025-11-21 02:31:38,038 | INFO     | ***************************************
[2025-11-21 03:32:08] 2025-11-21 02:31:38,541 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-21 03:32:08] 2025-11-21 02:31:38,552 | INFO     | sufficient remaining disk space (345623232512 B)
[2025-11-21 03:32:08] 2025-11-21 02:31:38,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 03:32:08] 2025-11-21 02:31:38,553 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 03:32:08] 2025-11-21 02:31:38,553 | INFO     | update_server=False
[2025-11-21 03:32:08] 2025-11-21 02:31:38,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 03:32:08] 2025-11-21 02:31:38,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 03:32:08] 2025-11-21 02:31:38,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 03:32:08] 2025-11-21 02:31:38,553 | INFO     | aborting loop
[2025-11-21 03:32:08] 2025-11-21 02:31:38,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 03:32:08] 2025-11-21 02:31:38,579 | INFO     | all data control threads have been joined
[2025-11-21 03:32:08] 2025-11-21 02:31:38,647 | INFO     | all job control threads have been joined
[2025-11-21 03:32:08] 2025-11-21 02:31:39,555 | INFO     | [job] queue monitor thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,557 | INFO     | [job] retrieve thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,558 | INFO     | [job] job monitor thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,584 | INFO     | [data] control thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,587 | INFO     | [payload] failed_post thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 03:32:08] 2025-11-21 02:31:39,590 | INFO     | all payload control threads have been joined
[2025-11-21 03:32:08] 2025-11-21 02:31:39,650 | INFO     | [job] control thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,768 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:39,975 | INFO     | [data] copytool_in thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:40,294 | INFO     | [payload] validate_post thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:40,390 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:40,403 | INFO     | [job] validate thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:40,520 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:40,558 | INFO     | [data] copytool_out thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:40,595 | INFO     | [payload] control thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:42,593 | INFO     | [monitor] cgroup control has ended
[2025-11-21 03:32:08] 2025-11-21 02:31:43,595 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 03:32:08] 2025-11-21 02:31:44,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140556156389184)>', '<ExcThread(monitor, started 140555673655040)>']
[2025-11-21 03:32:08] 2025-11-21 02:31:49,089 | INFO     | all workflow threads have been joined
[2025-11-21 03:32:08] 2025-11-21 02:31:49,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 03:32:08] 2025-11-21 02:31:49,089 | INFO     | traces error code: 0
[2025-11-21 03:32:08] 2025-11-21 02:31:49,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 03:32:08] 2025-11-21 02:32:08,201 | INFO     | PID=822784 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 03:32:08] 2025-11-21 02:32:08,201 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 03:32:08] 2025-11-21 02:32:08,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 03:32:08] 2025-11-21 02:32:08,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 03:32:08] 2025-11-21 02:32:08,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 03:32:08] 2025-11-21 02:32:08,202 | INFO     | [monitor] control thread has ended
[2025-11-21 03:32:08] 2025-11-21 02:32:08,255 [wrapper] ==== pilot stdout END ====
[2025-11-21 03:32:08] 2025-11-21 02:32:08,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 03:32:08] 2025-11-21 02:32:08,260 [wrapper] pilotpid: 822784
[2025-11-21 03:32:08] 2025-11-21 02:32:08,262 [wrapper] Pilot exit status: 0
[2025-11-21 03:32:08] 2025-11-21 02:32:08,270 [wrapper] pandaids: 6891569955
[2025-11-21 03:32:08] 2025-11-21 02:32:08,289 [wrapper] cleanup supervisor_pilot  882872 822785
[2025-11-21 03:32:08] 2025-11-21 02:32:08,291 [wrapper] Test setup, not cleaning
[2025-11-21 03:32:08] 2025-11-21 02:32:08,293 [wrapper] apfmon messages muted
[2025-11-21 03:32:08] 2025-11-21 02:32:08,296 [wrapper] ==== wrapper stdout END ====
[2025-11-21 03:32:08] 2025-11-21 02:32:08,298 [wrapper] ==== wrapper stderr END ====
[2025-11-21 03:32:08]  *** Error codes and diagnostics ***
[2025-11-21 03:32:08]     "exeErrorCode": 0,
[2025-11-21 03:32:08]     "exeErrorDiag": "",
[2025-11-21 03:32:08]     "pilotErrorCode": 0,
[2025-11-21 03:32:08]     "pilotErrorDiag": "",
[2025-11-21 03:32:08]  *** Listing of results directory ***
[2025-11-21 03:32:08] total 1323168
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:35 queuedata.json
[2025-11-21 03:32:08] -rwx------ 1 boinc boinc     36292 Nov 18 16:37 runpilot2-wrapper.sh
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc       100 Nov 20 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 03:32:08] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 19:14 run_atlas
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc       105 Nov 20 19:14 job.xml
[2025-11-21 03:32:08] -rw-r--r-- 2 boinc boinc 412264553 Nov 20 19:14 EVNT.47493065._000222.pool.root.1
[2025-11-21 03:32:08] drwxrwx--x 2 boinc boinc      4096 Nov 20 19:14 shared
[2025-11-21 03:32:08] -rw-r--r-- 2 boinc boinc    590104 Nov 20 19:14 input.tar.gz
[2025-11-21 03:32:08] -rw-r--r-- 2 boinc boinc     15120 Nov 20 19:14 start_atlas.sh
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc         0 Nov 20 19:14 boinc_setup_complete
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc      6441 Nov 20 19:14 init_data.xml
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc         0 Nov 20 19:14 boinc_lockfile
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc      2773 Nov 20 19:14 pandaJob.out
[2025-11-21 03:32:08] -rw------- 1 boinc boinc    989440 Nov 20 19:14 agis_schedconf.cvmfs.json
[2025-11-21 03:32:08] drwx------ 5 boinc boinc      4096 Nov 20 19:14 pilot3
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc       531 Nov 21 03:28 boinc_task_state.xml
[2025-11-21 03:32:08] -rw------- 1 boinc boinc 927981948 Nov 21 03:31 HITS.47493068._002220.pool.root.1
[2025-11-21 03:32:08] -rw------- 1 boinc boinc      1053 Nov 21 03:31 memory_monitor_summary.json
[2025-11-21 03:32:08] -rw------- 1 boinc boinc   1526164 Nov 21 03:31 agis_ddmendpoints.agis.ALL.json
[2025-11-21 03:32:08] -rw------- 1 boinc boinc   1180679 Nov 21 03:31 log.47493068._002220.job.log.tgz.1
[2025-11-21 03:32:08] -rw------- 1 boinc boinc      8602 Nov 21 03:31 heartbeat.json
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc      8192 Nov 21 03:31 boinc_mmap_file
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc        28 Nov 21 03:31 wrapper_checkpoint.txt
[2025-11-21 03:32:08] -rw------- 1 boinc boinc       746 Nov 21 03:32 pilotlog.txt
[2025-11-21 03:32:08] -rw------- 1 boinc boinc        95 Nov 21 03:32 pilot_heartbeat.json
[2025-11-21 03:32:08] -rw------- 1 boinc boinc   4200430 Nov 21 03:32 log.47493068._002220.job.log.1
[2025-11-21 03:32:08] -rw------- 1 boinc boinc       353 Nov 21 03:32 output.list
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc       620 Nov 21 03:32 runtime_log
[2025-11-21 03:32:08] -rw------- 1 boinc boinc   5396480 Nov 21 03:32 result.tar.gz
[2025-11-21 03:32:08] -rw------- 1 boinc boinc       673 Nov 21 03:32 Cl4NDmnwcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0MFKDmIEyNMn.diag
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc      8788 Nov 21 03:32 runtime_log.err
[2025-11-21 03:32:08] -rw-r--r-- 1 boinc boinc     21368 Nov 21 03:32 stderr.txt
[2025-11-21 03:32:08] HITS file was successfully produced:
[2025-11-21 03:32:08] -rw------- 1 boinc boinc 927981948 Nov 21 03:31 shared/HITS.pool.root.1
[2025-11-21 03:32:08]  *** Contents of shared directory: ***
[2025-11-21 03:32:08] total 1314712
[2025-11-21 03:32:08] -rw-r--r-- 2 boinc boinc 412264553 Nov 20 19:14 ATLAS.root_0
[2025-11-21 03:32:08] -rw-r--r-- 2 boinc boinc    590104 Nov 20 19:14 input.tar.gz
[2025-11-21 03:32:08] -rw-r--r-- 2 boinc boinc     15120 Nov 20 19:14 start_atlas.sh
[2025-11-21 03:32:08] -rw------- 1 boinc boinc 927981948 Nov 21 03:31 HITS.pool.root.1
[2025-11-21 03:32:08] -rw------- 1 boinc boinc   5396480 Nov 21 03:32 result.tar.gz
03:32:09 (819060): run_atlas exited; CPU time 88326.093604
03:32:09 (819060): called boinc_finish(0)

</stderr_txt>
]]>

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