Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:59:42 (952925): wrapper (7.7.26015): starting
11:59:42 (952925): wrapper: running run_atlas (--nthreads 2)
[2025-11-21 11:59:42] Arguments: --nthreads 2
[2025-11-21 11:59:42] Threads: 2
[2025-11-21 11:59:42] Checking for CVMFS
[2025-11-21 11:59:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 11:59:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 11:59:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 11:59:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 11:59:42] 2.9.2.0 442946 4166 59548 153121 1 81 36241331 36864001 0 130560 0 1363319 99.508 640382 2570 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-21 11:59:42] CVMFS is ok
[2025-11-21 11:59:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 11:59:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 11:59:42] Further information can be found at the LHC@home message board.
[2025-11-21 11:59:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 11:59:42] Checking for apptainer binary...
[2025-11-21 11:59:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 11:59:42] Running /usr/bin/apptainer --version
[2025-11-21 11:59:42] apptainer version 1.4.1-1.1
[2025-11-21 11:59:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 11:59:42] thA354a
[2025-11-21 11:59:42] apptainer works
[2025-11-21 11:59:42] Set ATHENA_PROC_NUMBER=2
[2025-11-21 11:59:42] Set ATHENA_CORE_NUMBER=2
[2025-11-21 11:59:42] Starting ATLAS job with PandaID=6891561660
[2025-11-21 11:59:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:05:17]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:05:17] 2025-11-21 23:04:44,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,557 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 00:05:17] 2025-11-21 23:04:45,557 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3426.7053749999995
[2025-11-22 00:05:17] 2025-11-21 23:04:45,558 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891561660/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,558 | INFO     | extracted standard info from prmon json
[2025-11-22 00:05:17] 2025-11-21 23:04:45,558 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:05:17] 2025-11-21 23:04:45,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:05:17] 2025-11-21 23:04:45,563 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:05:17] 2025-11-21 23:04:45,563 | INFO     | sum of square deviations: 112394784572.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,568 | INFO     | sum of deviations: 213879074251.99994
[2025-11-22 00:05:17] 2025-11-21 23:04:45,568 | INFO     | mean x: 1763744543.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,568 | INFO     | mean y: 2037199.677419355
[2025-11-22 00:05:17] 2025-11-21 23:04:45,568 | INFO     | intersect: -3354239975.5522265
[2025-11-22 00:05:17] 2025-11-21 23:04:45,568 | INFO     | chi2: 3.9866676434913146
[2025-11-22 00:05:17] 2025-11-21 23:04:45,569 | INFO     | sum of square deviations: 110046777757.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,573 | INFO     | sum of deviations: 307999474066.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,573 | INFO     | mean x: 1763744390.5
[2025-11-22 00:05:17] 2025-11-21 23:04:45,574 | INFO     | mean y: 2043293.93220339
[2025-11-22 00:05:17] 2025-11-21 23:04:45,574 | INFO     | intersect: -4934333360.915404
[2025-11-22 00:05:17] 2025-11-21 23:04:45,574 | INFO     | chi2: 2.3979478220019357
[2025-11-22 00:05:17] 2025-11-21 23:04:45,574 | INFO     | current chi2=2.3979478220019357 (change=39.85082187834603 %)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,574 | INFO     | sum of square deviations: 107731701792.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,579 | INFO     | sum of deviations: 308150627918.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,579 | INFO     | mean x: 1763744238.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,579 | INFO     | mean y: 2043303.8819345662
[2025-11-22 00:05:17] 2025-11-21 23:04:45,579 | INFO     | intersect: -5042886697.092151
[2025-11-22 00:05:17] 2025-11-21 23:04:45,579 | INFO     | chi2: 2.3947751218865005
[2025-11-22 00:05:17] 2025-11-21 23:04:45,579 | INFO     | current chi2=2.3947751218865005 (change=0.132308972127108 %)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,580 | INFO     | right removable region: 702
[2025-11-22 00:05:17] 2025-11-21 23:04:45,580 | INFO     | sum of square deviations: 110046777757.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,585 | INFO     | sum of deviations: 84002186372.50003
[2025-11-22 00:05:17] 2025-11-21 23:04:45,585 | INFO     | mean x: 1763744695.5
[2025-11-22 00:05:17] 2025-11-21 23:04:45,585 | INFO     | mean y: 2045625.3121468928
[2025-11-22 00:05:17] 2025-11-21 23:04:45,585 | INFO     | intersect: -1344276490.1073122
[2025-11-22 00:05:17] 2025-11-21 23:04:45,585 | INFO     | chi2: 2.0648994876897326
[2025-11-22 00:05:17] 2025-11-21 23:04:45,585 | INFO     | current chi2=2.0648994876897326 (change=48.204875039911734 %)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,585 | INFO     | sum of square deviations: 107731701792.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,590 | INFO     | sum of deviations: 54372860997.00001
[2025-11-22 00:05:17] 2025-11-21 23:04:45,590 | INFO     | mean x: 1763744848.0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,590 | INFO     | mean y: 2047570.6287339972
[2025-11-22 00:05:17] 2025-11-21 23:04:45,590 | INFO     | intersect: -888125441.2079757
[2025-11-22 00:05:17] 2025-11-21 23:04:45,590 | INFO     | chi2: 1.8811248155249696
[2025-11-22 00:05:17] 2025-11-21 23:04:45,590 | INFO     | current chi2=1.8811248155249696 (change=8.899933060198261 %)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,590 | INFO     | left removable region: 20
[2025-11-22 00:05:17] 2025-11-21 23:04:45,591 | INFO     | sum of square deviations: 98362739150.5
[2025-11-22 00:05:17] 2025-11-21 23:04:45,594 | INFO     | sum of deviations: 133802146562.50002
[2025-11-22 00:05:17] 2025-11-21 23:04:45,594 | INFO     | mean x: 1763744817.5
[2025-11-22 00:05:17] 2025-11-21 23:04:45,594 | INFO     | mean y: 2055047.151026393
[2025-11-22 00:05:17] 2025-11-21 23:04:45,594 | INFO     | intersect: -2397154700.4435763
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | chi2: 0.2752322042449009
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | current memory leak: 1.36 B/s (using 682 data points, chi2=0.28)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | could have reported an average CPU frequency of 4553 MHz (27 samples)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | ..............................
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . Timing measurements:
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . get job = 0 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . initial setup = 1 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . payload setup = 9 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . stage-in = 0 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . payload execution = 43449 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . stage-out = 1 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | . log creation = 0 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,595 | INFO     | ..............................
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | 
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | job summary report
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | --------------------------------------------------
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | PanDA job id: 6891561660
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | task id: 47493068
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | errors: (none)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | pilot state: finished 
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | transexitcode: 0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | exeerrorcode: 0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | exeerrordiag: 
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | exitcode: 0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | exitmsg: OK
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | cpuconsumptiontime: 86092 s
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | nevents: 1000
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | neventsw: 0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | pid: 963079
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | pgrp: 963079
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | corecount: 2
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | event service: False
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | sizes: {0: 2298795, 6: 2299057, 11: 2299085, 43461: 2344929, 43463: 2353985, 43470: 2354175}
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | --------------------------------------------------
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | 
[2025-11-22 00:05:17] 2025-11-21 23:04:45,624 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-22 00:05:17] 2025-11-21 23:04:45,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | job 6891561660 has completed (purged errors)
[2025-11-22 00:05:17] 2025-11-21 23:04:45,635 | INFO     | overall cleanup function is called
[2025-11-22 00:05:17] 2025-11-21 23:04:46,642 | INFO     | --- collectZombieJob: --- 10, [963079]
[2025-11-22 00:05:17] 2025-11-21 23:04:46,643 | INFO     | zombie collector waiting for pid 963079
[2025-11-22 00:05:17] 2025-11-21 23:04:46,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:05:17] 2025-11-21 23:04:46,643 | INFO     | collected zombie processes
[2025-11-22 00:05:17] 2025-11-21 23:04:46,643 | INFO     | will attempt to kill all subprocesses of pid=963079
[2025-11-22 00:05:17] 2025-11-21 23:04:46,680 | INFO     | process IDs to be killed: [963079] (in reverse order)
[2025-11-22 00:05:17] 2025-11-21 23:04:46,702 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:05:17] 2025-11-21 23:04:46,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:05:17] 2025-11-21 23:04:46,707 | INFO     | did not find any defunct processes belonging to 963079
[2025-11-22 00:05:17] 2025-11-21 23:04:46,711 | INFO     | did not find any defunct processes belonging to 963079
[2025-11-22 00:05:17] 2025-11-21 23:04:46,713 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:05:17] 2025-11-21 23:04:46,714 | INFO     | ready for new job
[2025-11-22 00:05:17] 2025-11-21 23:04:46,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:05:17] 2025-11-21 23:04:46,718 | INFO     | ***************************************
[2025-11-22 00:05:17] 2025-11-21 23:04:46,718 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:05:17] 2025-11-21 23:04:46,718 | INFO     | ***************************************
[2025-11-22 00:05:17] 2025-11-21 23:04:46,718 | INFO     | 
[2025-11-22 00:05:17] 2025-11-21 23:04:46,720 | INFO     | architecture information:
[2025-11-22 00:05:17] 2025-11-21 23:04:46,720 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:05:17] 2025-11-21 23:04:46,742 | INFO     | cat /etc/os-release:
[2025-11-22 00:05:17] NAME="CentOS Linux"
[2025-11-22 00:05:17] VERSION="7 (Core)"
[2025-11-22 00:05:17] ID="centos"
[2025-11-22 00:05:17] ID_LIKE="rhel fedora"
[2025-11-22 00:05:17] VERSION_ID="7"
[2025-11-22 00:05:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:05:17] ANSI_COLOR="0;31"
[2025-11-22 00:05:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:05:17] HOME_URL="https://www.centos.org/"
[2025-11-22 00:05:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:05:17] 
[2025-11-22 00:05:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:05:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:05:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:05:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:05:17] 
[2025-11-22 00:05:17] 2025-11-21 23:04:46,742 | INFO     | ***************************************
[2025-11-22 00:05:17] 2025-11-21 23:04:47,246 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-22 00:05:17] 2025-11-21 23:04:47,257 | INFO     | sufficient remaining disk space (188471050240 B)
[2025-11-22 00:05:17] 2025-11-21 23:04:47,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:05:17] 2025-11-21 23:04:47,258 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:05:17] 2025-11-21 23:04:47,258 | INFO     | update_server=False
[2025-11-22 00:05:17] 2025-11-21 23:04:47,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:05:17] 2025-11-21 23:04:47,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:05:17] 2025-11-21 23:04:47,414 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 00:05:17] 2025-11-21 23:04:47,414 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 00:05:17] 2025-11-21 23:04:47,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:05:17] 2025-11-21 23:04:47,414 | INFO     | will abort loop
[2025-11-22 00:05:17] 2025-11-21 23:04:47,460 | INFO     | all job control threads have been joined
[2025-11-22 00:05:17] 2025-11-21 23:04:47,587 | INFO     | all data control threads have been joined
[2025-11-22 00:05:17] 2025-11-21 23:04:47,831 | INFO     | all payload control threads have been joined
[2025-11-22 00:05:17] 2025-11-21 23:04:48,263 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,264 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,374 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,420 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,427 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:05:17] 2025-11-21 23:04:48,467 | INFO     | [job] control thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:05:17] 2025-11-21 23:04:48,516 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,589 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,593 | INFO     | [data] control thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,837 | INFO     | [payload] control thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:48,882 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:49,202 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:49,535 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:49,620 | INFO     | [job] validate thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:50,461 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:52,485 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:05:17] 2025-11-21 23:04:54,685 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:05:17] 2025-11-21 23:04:56,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291965904704)>', '<ExcThread(monitor, started 140291315054336)>']
[2025-11-22 00:05:17] 2025-11-21 23:05:01,583 | INFO     | all workflow threads have been joined
[2025-11-22 00:05:17] 2025-11-21 23:05:01,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:05:17] 2025-11-21 23:05:01,584 | INFO     | traces error code: 0
[2025-11-22 00:05:17] 2025-11-21 23:05:01,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:05:17] 2025-11-21 23:05:16,953 | INFO     | PID=956634 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 00:05:17] 2025-11-21 23:05:16,954 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:05:17] 2025-11-21 23:05:16,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:05:17] 2025-11-21 23:05:16,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:05:17] 2025-11-21 23:05:16,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:05:17] 2025-11-21 23:05:16,954 | CRITICAL | thread 'MainThread' is not alive
[2025-11-22 00:05:17] 2025-11-21 23:05:16,954 | INFO     | [monitor] control thread has ended
[2025-11-22 00:05:17] 2025-11-21 23:05:16,994 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:05:17] 2025-11-21 23:05:16,997 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:05:17] 2025-11-21 23:05:17,000 [wrapper] pilotpid: 956634
[2025-11-22 00:05:17] 2025-11-21 23:05:17,002 [wrapper] Pilot exit status: 0
[2025-11-22 00:05:17] 2025-11-21 23:05:17,008 [wrapper] pandaids: 6891561660
[2025-11-22 00:05:17] 2025-11-21 23:05:17,021 [wrapper] cleanup supervisor_pilot 1038004 956635
[2025-11-22 00:05:17] 2025-11-21 23:05:17,024 [wrapper] Test setup, not cleaning
[2025-11-22 00:05:17] 2025-11-21 23:05:17,026 [wrapper] apfmon messages muted
[2025-11-22 00:05:17] 2025-11-21 23:05:17,027 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:05:17] 2025-11-21 23:05:17,029 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:05:17]  *** Error codes and diagnostics ***
[2025-11-22 00:05:17]     "exeErrorCode": 0,
[2025-11-22 00:05:17]     "exeErrorDiag": "",
[2025-11-22 00:05:17]     "pilotErrorCode": 0,
[2025-11-22 00:05:17]     "pilotErrorDiag": "",
[2025-11-22 00:05:17]  *** Listing of results directory ***
[2025-11-22 00:05:17] total 1315656
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:27 queuedata.json
[2025-11-22 00:05:17] -rwx------ 1 boinc boinc     36292 Nov 18 16:27 runpilot2-wrapper.sh
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc       100 Nov 21 11:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:05:17] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 11:59 run_atlas
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc       105 Nov 21 11:59 job.xml
[2025-11-22 00:05:17] -rw-r--r-- 2 boinc boinc 409559866 Nov 21 11:59 EVNT.47493065._000093.pool.root.1
[2025-11-22 00:05:17] -rw-r--r-- 2 boinc boinc    590102 Nov 21 11:59 input.tar.gz
[2025-11-22 00:05:17] -rw-r--r-- 2 boinc boinc     15120 Nov 21 11:59 start_atlas.sh
[2025-11-22 00:05:17] drwxrwx--x 2 boinc boinc      4096 Nov 21 11:59 shared
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc         0 Nov 21 11:59 boinc_setup_complete
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc      6204 Nov 21 11:59 init_data.xml
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc         0 Nov 21 11:59 boinc_lockfile
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc      2771 Nov 21 11:59 pandaJob.out
[2025-11-22 00:05:17] -rw------- 1 boinc boinc    989817 Nov 21 11:59 agis_schedconf.cvmfs.json
[2025-11-22 00:05:17] drwx------ 5 boinc boinc      4096 Nov 21 11:59 pilot3
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc       531 Nov 22 00:01 boinc_task_state.xml
[2025-11-22 00:05:17] -rw------- 1 boinc boinc 919168369 Nov 22 00:04 HITS.47493068._000930.pool.root.1
[2025-11-22 00:05:17] -rw------- 1 boinc boinc        95 Nov 22 00:04 pilot_heartbeat.json
[2025-11-22 00:05:17] -rw------- 1 boinc boinc      1022 Nov 22 00:04 memory_monitor_summary.json
[2025-11-22 00:05:17] -rw------- 1 boinc boinc   1526164 Nov 22 00:04 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:05:17] -rw------- 1 boinc boinc   1203209 Nov 22 00:04 log.47493068._000930.job.log.tgz.1
[2025-11-22 00:05:17] -rw------- 1 boinc boinc      8561 Nov 22 00:04 heartbeat.json
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc      8192 Nov 22 00:04 boinc_mmap_file
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc        28 Nov 22 00:04 wrapper_checkpoint.txt
[2025-11-22 00:05:17] -rw------- 1 boinc boinc       816 Nov 22 00:05 pilotlog.txt
[2025-11-22 00:05:17] -rw------- 1 boinc boinc   6090188 Nov 22 00:05 log.47493068._000930.job.log.1
[2025-11-22 00:05:17] -rw------- 1 boinc boinc       353 Nov 22 00:05 output.list
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc       620 Nov 22 00:05 runtime_log
[2025-11-22 00:05:17] -rw------- 1 boinc boinc   7311360 Nov 22 00:05 result.tar.gz
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc      8783 Nov 22 00:05 runtime_log.err
[2025-11-22 00:05:17] -rw------- 1 boinc boinc       666 Nov 22 00:05 iUHNDmYncf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeDFKDmubJqbm.diag
[2025-11-22 00:05:17] -rw-r--r-- 1 boinc boinc     21199 Nov 22 00:05 stderr.txt
[2025-11-22 00:05:17] HITS file was successfully produced:
[2025-11-22 00:05:17] -rw------- 1 boinc boinc 919168369 Nov 22 00:04 shared/HITS.pool.root.1
[2025-11-22 00:05:17]  *** Contents of shared directory: ***
[2025-11-22 00:05:17] total 1305336
[2025-11-22 00:05:17] -rw-r--r-- 2 boinc boinc 409559866 Nov 21 11:59 ATLAS.root_0
[2025-11-22 00:05:17] -rw-r--r-- 2 boinc boinc    590102 Nov 21 11:59 input.tar.gz
[2025-11-22 00:05:17] -rw-r--r-- 2 boinc boinc     15120 Nov 21 11:59 start_atlas.sh
[2025-11-22 00:05:17] -rw------- 1 boinc boinc 919168369 Nov 22 00:04 HITS.pool.root.1
[2025-11-22 00:05:17] -rw------- 1 boinc boinc   7311360 Nov 22 00:05 result.tar.gz
00:05:18 (952925): run_atlas exited; CPU time 86238.838354
00:05:18 (952925): called boinc_finish(0)

</stderr_txt>
]]>

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