Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:50:41 (27829): wrapper (7.7.26015): starting
00:50:41 (27829): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 00:50:41] Arguments: --nthreads 8
[2025-11-22 00:50:41] Threads: 8
[2025-11-22 00:50:41] Checking for CVMFS
[2025-11-22 00:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 00:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 00:50:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 00:50:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 00:50:44] 2.11.2.0 32354 278825 140704 153152 3 236 15961526 25165825 4585 130560 3 131350758 99.861 82491713 2998 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 00:50:44] CVMFS is ok
[2025-11-22 00:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 00:50:44] Checking for apptainer binary...
[2025-11-22 00:50:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 00:50:44] Running /usr/bin/apptainer --version
[2025-11-22 00:50:44] apptainer version 1.3.2-1.el7
[2025-11-22 00:50:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 00:50:49] cg-vwn392.simple-grid.lan
[2025-11-22 00:50:49] apptainer works
[2025-11-22 00:50:49] Set ATHENA_PROC_NUMBER=8
[2025-11-22 00:50:49] Set ATHENA_CORE_NUMBER=8
[2025-11-22 00:50:50] Starting ATLAS job with PandaID=6891592845
[2025-11-22 00:50:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 02:09:07]  *** The last 200 lines of the pilot log: ***
[2025-11-23 02:09:07] 2025-11-23 01:08:06,513 | INFO     | monitor loop #6113: job 0:6891592845 is in state 'finished'
[2025-11-23 02:09:07] 2025-11-23 01:08:06,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:09:07] 2025-11-23 01:08:07,903 | INFO     | time since job start (90829s) is within the limit (172800.0s)
[2025-11-23 02:09:07] 2025-11-23 01:08:09,017 | INFO     | monitor loop #6114: job 0:6891592845 is in state 'finished'
[2025-11-23 02:09:07] 2025-11-23 01:08:09,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:09:07] 2025-11-23 01:08:09,914 | INFO     | time since job start (90831s) is within the limit (172800.0s)
[2025-11-23 02:09:07] 2025-11-23 01:08:11,528 | INFO     | monitor loop #6115: job 0:6891592845 is in state 'finished'
[2025-11-23 02:09:07] 2025-11-23 01:08:11,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:09:07] 2025-11-23 01:08:11,921 | INFO     | time since job start (90833s) is within the limit (172800.0s)
[2025-11-23 02:09:07] 2025-11-23 01:08:13,934 | INFO     | time since job start (90835s) is within the limit (172800.0s)
[2025-11-23 02:09:07] 2025-11-23 01:08:14,033 | INFO     | monitor loop #6116: job 0:6891592845 is in state 'finished'
[2025-11-23 02:09:07] 2025-11-23 01:08:14,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,123 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 02:09:07] 2025-11-23 01:08:15,125 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 02:09:07] 2025-11-23 01:08:15,127 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6891592845/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,128 | INFO     | extracted standard info from prmon json
[2025-11-23 02:09:07] 2025-11-23 01:08:15,128 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 02:09:07] 2025-11-23 01:08:15,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 02:09:07] 2025-11-23 01:08:15,165 | INFO     | fitting pss+swap vs Time
[2025-11-23 02:09:07] 2025-11-23 01:08:15,168 | INFO     | sum of square deviations: 1003188104930.4469
[2025-11-23 02:09:07] 2025-11-23 01:08:15,234 | INFO     | sum of deviations: 3072846011884.1357
[2025-11-23 02:09:07] 2025-11-23 01:08:15,235 | INFO     | mean x: 1763814859.3455038
[2025-11-23 02:09:07] 2025-11-23 01:08:15,235 | INFO     | mean y: 2827014.418526031
[2025-11-23 02:09:07] 2025-11-23 01:08:15,235 | INFO     | intersect: -5399880044.809997
[2025-11-23 02:09:07] 2025-11-23 01:08:15,237 | INFO     | chi2: 28.30670340603953
[2025-11-23 02:09:07] 2025-11-23 01:08:15,240 | INFO     | sum of square deviations: 993048735703.8655
[2025-11-23 02:09:07] 2025-11-23 01:08:15,325 | INFO     | sum of deviations: 3544889389245.6104
[2025-11-23 02:09:07] 2025-11-23 01:08:15,325 | INFO     | mean x: 1763814706.8500679
[2025-11-23 02:09:07] 2025-11-23 01:08:15,325 | INFO     | mean y: 2834112.785617368
[2025-11-23 02:09:07] 2025-11-23 01:08:15,325 | INFO     | intersect: -6293461138.500732
[2025-11-23 02:09:07] 2025-11-23 01:08:15,327 | INFO     | chi2: 25.21339865336316
[2025-11-23 02:09:07] 2025-11-23 01:08:15,328 | INFO     | current chi2=25.21339865336316 (change=10.92781702024822 %)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,328 | INFO     | right removable region: 1473
[2025-11-23 02:09:07] 2025-11-23 01:08:15,330 | INFO     | sum of square deviations: 993047521803.8652
[2025-11-23 02:09:07] 2025-11-23 01:08:15,404 | INFO     | sum of deviations: 2450499773336.0024
[2025-11-23 02:09:07] 2025-11-23 01:08:15,405 | INFO     | mean x: 1763815011.8500679
[2025-11-23 02:09:07] 2025-11-23 01:08:15,405 | INFO     | mean y: 2836373.4660786972
[2025-11-23 02:09:07] 2025-11-23 01:08:15,405 | INFO     | intersect: -4349652497.251736
[2025-11-23 02:09:07] 2025-11-23 01:08:15,407 | INFO     | chi2: 23.54302956137634
[2025-11-23 02:09:07] 2025-11-23 01:08:15,407 | INFO     | current chi2=23.54302956137634 (change=16.828783544066145 %)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,407 | INFO     | left removable region: 10
[2025-11-23 02:09:07] 2025-11-23 01:08:15,410 | INFO     | sum of square deviations: 970980697333.1644
[2025-11-23 02:09:07] 2025-11-23 01:08:15,494 | INFO     | sum of deviations: 2478764562993.2114
[2025-11-23 02:09:07] 2025-11-23 01:08:15,494 | INFO     | mean x: 1763814981.3602188
[2025-11-23 02:09:07] 2025-11-23 01:08:15,494 | INFO     | mean y: 2853354.7320574163
[2025-11-23 02:09:07] 2025-11-23 01:08:15,494 | INFO     | intersect: -4499895344.063225
[2025-11-23 02:09:07] 2025-11-23 01:08:15,496 | INFO     | chi2: 16.18458447129458
[2025-11-23 02:09:07] 2025-11-23 01:08:15,497 | INFO     | current memory leak: 2.55 B/s (using 1463 data points, chi2=16.18)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,500 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,500 | INFO     | ..............................
[2025-11-23 02:09:07] 2025-11-23 01:08:15,500 | INFO     | . Timing measurements:
[2025-11-23 02:09:07] 2025-11-23 01:08:15,500 | INFO     | . get job = 0 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,501 | INFO     | . initial setup = 6 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,501 | INFO     | . payload setup = 158 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,501 | INFO     | . stage-in = 0 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,501 | INFO     | . payload execution = 90365 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,501 | INFO     | . stage-out = 6 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,501 | INFO     | . log creation = 2 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,501 | INFO     | ..............................
[2025-11-23 02:09:07] 2025-11-23 01:08:15,941 | INFO     | time since job start (90837s) is within the limit (172800.0s)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,949 | INFO     | 
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | job summary report
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | --------------------------------------------------
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | PanDA job id: 6891592845
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | task id: 47493068
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | errors: (none)
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | pilot state: finished 
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | transexitcode: 0
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | exeerrorcode: 0
[2025-11-23 02:09:07] 2025-11-23 01:08:15,950 | INFO     | exeerrordiag: 
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | exitcode: 0
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | exitmsg: OK
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | cpuconsumptiontime: 331510 s
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | nevents: 1000
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | neventsw: 0
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | pid: 5835
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | pgrp: 5835
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | corecount: 8
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | event service: False
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | sizes: {0: 2297911, 1: 2298596, 2: 2298795, 13: 2298795, 23: 2298851, 34: 2298879, 45: 2299035, 56: 2299063, 66: 2299091, 77: 2299119, 88: 2299175, 91: 2299745, 99
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | --------------------------------------------------
[2025-11-23 02:09:07] 2025-11-23 01:08:15,951 | INFO     | 
[2025-11-23 02:09:07] 2025-11-23 01:08:15,952 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-23 02:09:07] 2025-11-23 01:08:16,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | job 6891592845 has completed (purged errors)
[2025-11-23 02:09:07] 2025-11-23 01:08:16,574 | INFO     | overall cleanup function is called
[2025-11-23 02:09:07] 2025-11-23 01:08:17,085 | INFO     | PID=31636 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 02:09:07] 2025-11-23 01:08:17,086 | INFO     | .. there are 9 such processes running
[2025-11-23 02:09:07] 2025-11-23 01:08:17,599 | INFO     | --- collectZombieJob: --- 10, [5835]
[2025-11-23 02:09:07] 2025-11-23 01:08:17,600 | INFO     | zombie collector waiting for pid 5835
[2025-11-23 02:09:07] 2025-11-23 01:08:17,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 02:09:07] 2025-11-23 01:08:17,600 | INFO     | collected zombie processes
[2025-11-23 02:09:07] 2025-11-23 01:08:17,600 | INFO     | will attempt to kill all subprocesses of pid=5835
[2025-11-23 02:09:07] 2025-11-23 01:08:17,721 | INFO     | process IDs to be killed: [5835] (in reverse order)
[2025-11-23 02:09:07] 2025-11-23 01:08:18,609 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 02:09:07] 2025-11-23 01:08:18,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 02:09:07] 2025-11-23 01:08:18,614 | INFO     | did not find any defunct processes belonging to 5835
[2025-11-23 02:09:07] 2025-11-23 01:08:18,617 | INFO     | did not find any defunct processes belonging to 5835
[2025-11-23 02:09:07] 2025-11-23 01:08:18,670 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 02:09:07] 2025-11-23 01:08:18,670 | INFO     | ready for new job
[2025-11-23 02:09:07] 2025-11-23 01:08:18,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 02:09:07] 2025-11-23 01:08:18,678 | INFO     | ***************************************
[2025-11-23 02:09:07] 2025-11-23 01:08:18,679 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 02:09:07] 2025-11-23 01:08:18,679 | INFO     | ***************************************
[2025-11-23 02:09:07] 2025-11-23 01:08:18,679 | INFO     | 
[2025-11-23 02:09:07] 2025-11-23 01:08:18,683 | INFO     | pilot is running in a VM
[2025-11-23 02:09:07] 2025-11-23 01:08:18,683 | INFO     | architecture information:
[2025-11-23 02:09:07] 2025-11-23 01:08:18,690 | INFO     | executing command: cat /etc/os-release
[2025-11-23 02:09:07] 2025-11-23 01:08:18,940 | INFO     | cat /etc/os-release:
[2025-11-23 02:09:07] NAME="CentOS Linux"
[2025-11-23 02:09:07] VERSION="7 (Core)"
[2025-11-23 02:09:07] ID="centos"
[2025-11-23 02:09:07] ID_LIKE="rhel fedora"
[2025-11-23 02:09:07] VERSION_ID="7"
[2025-11-23 02:09:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 02:09:07] ANSI_COLOR="0;31"
[2025-11-23 02:09:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 02:09:07] HOME_URL="https://www.centos.org/"
[2025-11-23 02:09:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 02:09:07] 
[2025-11-23 02:09:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 02:09:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 02:09:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 02:09:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 02:09:07] 
[2025-11-23 02:09:07] 2025-11-23 01:08:18,940 | INFO     | ***************************************
[2025-11-23 02:09:07] 2025-11-23 01:08:19,445 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-23 02:09:07] 2025-11-23 01:08:19,691 | INFO     | sufficient remaining disk space (494982397952 B)
[2025-11-23 02:09:07] 2025-11-23 01:08:19,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 02:09:07] 2025-11-23 01:08:19,692 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 02:09:07] 2025-11-23 01:08:19,692 | INFO     | update_server=False
[2025-11-23 02:09:07] 2025-11-23 01:08:19,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 02:09:07] 2025-11-23 01:08:19,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 02:09:07] 2025-11-23 01:08:20,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:09:07] 2025-11-23 01:08:20,056 | INFO     | aborting loop
[2025-11-23 02:09:07] 2025-11-23 01:08:20,313 | INFO     | all payload control threads have been joined
[2025-11-23 02:09:07] 2025-11-23 01:08:20,359 | INFO     | all data control threads have been joined
[2025-11-23 02:09:07] 2025-11-23 01:08:20,631 | INFO     | all job control threads have been joined
[2025-11-23 02:09:07] 2025-11-23 01:08:20,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 02:09:07] 2025-11-23 01:08:20,699 | INFO     | [job] retrieve thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:20,710 | INFO     | [job] validate thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:20,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 02:09:07] 2025-11-23 01:08:20,762 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:20,808 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,062 | INFO     | [job] job monitor thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,214 | INFO     | [payload] validate_post thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,320 | INFO     | [payload] control thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,365 | INFO     | [data] control thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,532 | INFO     | [data] copytool_in thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,637 | INFO     | [job] control thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,674 | INFO     | [job] queue monitor thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:21,711 | INFO     | [payload] failed_post thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:22,183 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:22,761 | INFO     | [data] copytool_out thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:23,702 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:30,642 | INFO     | job.realtimelogging is not enabled
[2025-11-23 02:09:07] 2025-11-23 01:08:31,648 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 02:09:07] 2025-11-23 01:08:49,263 | INFO     | PID=31636 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 02:09:07] 2025-11-23 01:08:49,263 | INFO     | .. there are 9 such processes running
[2025-11-23 02:09:07] 2025-11-23 01:08:49,263 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 02:09:07] 2025-11-23 01:08:49,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 02:09:07] 2025-11-23 01:08:49,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 02:09:07] 2025-11-23 01:08:57,499 | INFO     | [monitor] cgroup control has ended
[2025-11-23 02:09:07] 2025-11-23 01:08:58,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735419709248)>', '<ExcThread(monitor, started 139734613489408)>']
[2025-11-23 02:09:07] 2025-11-23 01:08:58,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 02:09:07] 2025-11-23 01:08:58,318 | INFO     | [monitor] control thread has ended
[2025-11-23 02:09:07] 2025-11-23 01:09:03,152 | INFO     | all workflow threads have been joined
[2025-11-23 02:09:07] 2025-11-23 01:09:03,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 02:09:07] 2025-11-23 01:09:03,153 | INFO     | traces error code: 0
[2025-11-23 02:09:07] 2025-11-23 01:09:03,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 02:09:07] 2025-11-23 01:09:03,570 [wrapper] ==== pilot stdout END ====
[2025-11-23 02:09:07] 2025-11-23 01:09:03,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 02:09:07] 2025-11-23 01:09:03,753 [wrapper] pilotpid: 31636
[2025-11-23 02:09:07] 2025-11-23 01:09:03,823 [wrapper] Pilot exit status: 0
[2025-11-23 02:09:07] 2025-11-23 01:09:04,166 [wrapper] pandaids: 6891592845
[2025-11-23 02:09:07] 2025-11-23 01:09:05,047 [wrapper] cleanup supervisor_pilot 27049 31637
[2025-11-23 02:09:07] 2025-11-23 01:09:05,086 [wrapper] Test setup, not cleaning
[2025-11-23 02:09:07] 2025-11-23 01:09:05,150 [wrapper] apfmon messages muted
[2025-11-23 02:09:07] 2025-11-23 01:09:05,259 [wrapper] ==== wrapper stdout END ====
[2025-11-23 02:09:07] 2025-11-23 01:09:05,346 [wrapper] ==== wrapper stderr END ====
[2025-11-23 02:09:07]  *** Error codes and diagnostics ***
[2025-11-23 02:09:07]     "exeErrorCode": 0,
[2025-11-23 02:09:07]     "exeErrorDiag": "",
[2025-11-23 02:09:07]     "pilotErrorCode": 0,
[2025-11-23 02:09:07]     "pilotErrorDiag": "",
[2025-11-23 02:09:07]  *** Listing of results directory ***
[2025-11-23 02:09:07] total 1314880
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-23 02:09:07] -rwx------. 1 boinc boinc     36292 Nov 18 19:25 runpilot2-wrapper.sh
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc      5112 Nov 18 19:25 queuedata.json
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc       100 Nov 22 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 02:09:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 00:50 run_atlas
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc       105 Nov 22 00:50 job.xml
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc      6390 Nov 22 00:50 init_data.xml
[2025-11-23 02:09:07] -rw-r--r--. 2 boinc boinc 408645955 Nov 22 00:50 EVNT.47493065._000654.pool.root.1
[2025-11-23 02:09:07] -rw-r--r--. 2 boinc boinc     15120 Nov 22 00:50 start_atlas.sh
[2025-11-23 02:09:07] drwxrwx--x. 2 boinc boinc        68 Nov 22 00:50 shared
[2025-11-23 02:09:07] -rw-r--r--. 2 boinc boinc    590086 Nov 22 00:50 input.tar.gz
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc         0 Nov 22 00:50 boinc_lockfile
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc      2769 Nov 22 00:50 pandaJob.out
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc    989798 Nov 22 00:54 agis_schedconf.cvmfs.json
[2025-11-23 02:09:07] drwx------. 5 boinc boinc      4096 Nov 22 00:54 pilot3
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc       533 Nov 23 01:37 boinc_task_state.xml
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc 904551024 Nov 23 02:04 HITS.47493068._006031.pool.root.1
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc      1030 Nov 23 02:06 memory_monitor_summary.json
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc   1526164 Nov 23 02:06 agis_ddmendpoints.agis.ALL.json
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc   2558980 Nov 23 02:06 log.47493068._006031.job.log.tgz.1
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc        95 Nov 23 02:07 pilot_heartbeat.json
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc      7959 Nov 23 02:08 heartbeat.json
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc        29 Nov 23 02:08 wrapper_checkpoint.txt
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc      8192 Nov 23 02:08 boinc_mmap_file
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc      4956 Nov 23 02:09 pilotlog.txt
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc  12109907 Nov 23 02:09 log.47493068._006031.job.log.1
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc       353 Nov 23 02:09 output.list
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc       620 Nov 23 02:09 runtime_log
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc  14684160 Nov 23 02:09 result.tar.gz
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc      8703 Nov 23 02:09 runtime_log.err
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc       662 Nov 23 02:09 MBZKDmIZff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBFGKDmUFpSTo.diag
[2025-11-23 02:09:07] -rw-r--r--. 1 boinc boinc     21409 Nov 23 02:09 stderr.txt
[2025-11-23 02:09:07] HITS file was successfully produced:
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc 904551024 Nov 23 02:04 shared/HITS.pool.root.1
[2025-11-23 02:09:07]  *** Contents of shared directory: ***
[2025-11-23 02:09:07] total 1297360
[2025-11-23 02:09:07] -rw-r--r--. 2 boinc boinc 408645955 Nov 22 00:50 ATLAS.root_0
[2025-11-23 02:09:07] -rw-r--r--. 2 boinc boinc     15120 Nov 22 00:50 start_atlas.sh
[2025-11-23 02:09:07] -rw-r--r--. 2 boinc boinc    590086 Nov 22 00:50 input.tar.gz
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc 904551024 Nov 23 02:04 HITS.pool.root.1
[2025-11-23 02:09:07] -rw-------. 1 boinc boinc  14684160 Nov 23 02:09 result.tar.gz
02:09:09 (27829): run_atlas exited; CPU time 332015.999695
02:09:09 (27829): called boinc_finish(0)

</stderr_txt>
]]>

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