Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:45:28 (481962): wrapper (7.7.26015): starting
04:45:28 (481962): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 04:45:28] Arguments: --nthreads 4
[2025-11-20 04:45:28] Threads: 4
[2025-11-20 04:45:28] Checking for CVMFS
[2025-11-20 04:45:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 04:45:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 04:45:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 04:45:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 04:45:28] 2.9.2.0 189344 2031 77336 153067 0 81 32191466 36864001 0 130560 0 814796 99.751 260463 6825 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-20 04:45:28] CVMFS is ok
[2025-11-20 04:45:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 04:45:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 04:45:28] Further information can be found at the LHC@home message board.
[2025-11-20 04:45:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 04:45:28] Checking for apptainer binary...
[2025-11-20 04:45:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 04:45:28] Running /usr/bin/apptainer --version
[2025-11-20 04:45:28] apptainer version 1.4.1-1.1
[2025-11-20 04:45:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 04:45:28] belleA267b
[2025-11-20 04:45:28] apptainer works
[2025-11-20 04:45:28] Set ATHENA_PROC_NUMBER=4
[2025-11-20 04:45:28] Set ATHENA_CORE_NUMBER=4
[2025-11-20 04:45:28] Starting ATLAS job with PandaID=6891596452
[2025-11-20 04:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 11:32:11]  *** The last 200 lines of the pilot log: ***
[2025-11-20 11:32:11] 2025-11-20 10:31:11,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 11:32:11] 2025-11-20 10:31:12,352 | INFO     | time since job start (24337s) is within the limit (172800.0s)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,687 | INFO     | monitor loop #1854: job 0:6891596452 is in state 'finished'
[2025-11-20 11:32:11] 2025-11-20 10:31:13,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,971 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 11:32:11] 2025-11-20 10:31:13,972 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3452.2326249999996
[2025-11-20 11:32:11] 2025-11-20 10:31:13,974 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891596452/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,974 | INFO     | extracted standard info from prmon json
[2025-11-20 11:32:11] 2025-11-20 10:31:13,974 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 11:32:11] 2025-11-20 10:31:13,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 11:32:11] 2025-11-20 10:31:13,977 | INFO     | fitting pss+swap vs Time
[2025-11-20 11:32:11] 2025-11-20 10:31:13,977 | INFO     | sum of square deviations: 19696741400.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,979 | INFO     | sum of deviations: 191309602939.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,979 | INFO     | mean x: 1763622497.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,979 | INFO     | mean y: 2400012.05764411
[2025-11-20 11:32:11] 2025-11-20 10:31:13,979 | INFO     | intersect: -17127231371.301926
[2025-11-20 11:32:11] 2025-11-20 10:31:13,979 | INFO     | chi2: 4.240422314944196
[2025-11-20 11:32:11] 2025-11-20 10:31:13,979 | INFO     | sum of square deviations: 18965499782.5
[2025-11-20 11:32:11] 2025-11-20 10:31:13,981 | INFO     | sum of deviations: 255879517834.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,981 | INFO     | mean x: 1763622344.5
[2025-11-20 11:32:11] 2025-11-20 10:31:13,981 | INFO     | mean y: 2413428.279187817
[2025-11-20 11:32:11] 2025-11-20 10:31:13,981 | INFO     | intersect: -23792099783.98705
[2025-11-20 11:32:11] 2025-11-20 10:31:13,981 | INFO     | chi2: 2.779049487322103
[2025-11-20 11:32:11] 2025-11-20 10:31:13,981 | INFO     | current chi2=2.779049487322103 (change=34.46290767954617 %)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,981 | INFO     | sum of square deviations: 18252584090.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,982 | INFO     | sum of deviations: 252439747049.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,982 | INFO     | mean x: 1763622192.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,982 | INFO     | mean y: 2412690.850899743
[2025-11-20 11:32:11] 2025-11-20 10:31:13,982 | INFO     | intersect: -24389111152.74548
[2025-11-20 11:32:11] 2025-11-20 10:31:13,983 | INFO     | chi2: 2.774315231481275
[2025-11-20 11:32:11] 2025-11-20 10:31:13,983 | INFO     | current chi2=2.774315231481275 (change=0.17035521902094775 %)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,983 | INFO     | right removable region: 388
[2025-11-20 11:32:11] 2025-11-20 10:31:13,983 | INFO     | sum of square deviations: 18965499782.5
[2025-11-20 11:32:11] 2025-11-20 10:31:13,984 | INFO     | sum of deviations: 95997693327.49997
[2025-11-20 11:32:11] 2025-11-20 10:31:13,984 | INFO     | mean x: 1763622649.5
[2025-11-20 11:32:11] 2025-11-20 10:31:13,984 | INFO     | mean y: 2419858.576142132
[2025-11-20 11:32:11] 2025-11-20 10:31:13,984 | INFO     | intersect: -8924511052.4856
[2025-11-20 11:32:11] 2025-11-20 10:31:13,985 | INFO     | chi2: 1.9851322434450425
[2025-11-20 11:32:11] 2025-11-20 10:31:13,985 | INFO     | current chi2=1.9851322434450425 (change=53.185506159398486 %)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,985 | INFO     | sum of square deviations: 18252584090.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,986 | INFO     | sum of deviations: 60373928513.00023
[2025-11-20 11:32:11] 2025-11-20 10:31:13,986 | INFO     | mean x: 1763622802.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,986 | INFO     | mean y: 2427441.766066838
[2025-11-20 11:32:11] 2025-11-20 10:31:13,986 | INFO     | intersect: -5831093798.121297
[2025-11-20 11:32:11] 2025-11-20 10:31:13,986 | INFO     | chi2: 1.5622239836610021
[2025-11-20 11:32:11] 2025-11-20 10:31:13,986 | INFO     | current chi2=1.5622239836610021 (change=21.30378271676833 %)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,987 | INFO     | left removable region: 20
[2025-11-20 11:32:11] 2025-11-20 10:31:13,987 | INFO     | sum of square deviations: 15453208812.0
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | sum of deviations: 102105491140.5
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | mean x: 1763622771.5
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | mean y: 2445870.850543478
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | intersect: -11650510577.310684
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | chi2: 0.06713367243762465
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | current memory leak: 6.61 B/s (using 368 data points, chi2=0.07)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | could have reported an average CPU frequency of 3813 MHz (17 samples)
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | ..............................
[2025-11-20 11:32:11] 2025-11-20 10:31:13,988 | INFO     | . Timing measurements:
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | . get job = 0 s
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | . initial setup = 1 s
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | . payload setup = 4 s
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | . stage-in = 0 s
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | . payload execution = 24309 s
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | . stage-out = 1 s
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | . log creation = 0 s
[2025-11-20 11:32:11] 2025-11-20 10:31:13,989 | INFO     | ..............................
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | 
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | job summary report
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | --------------------------------------------------
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | PanDA job id: 6891596452
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | task id: 47493068
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | errors: (none)
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | pilot state: finished 
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | transexitcode: 0
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | exeerrorcode: 0
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | exeerrordiag: 
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | exitcode: 0
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | exitmsg: OK
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | cpuconsumptiontime: 95276 s
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | nevents: 1000
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | neventsw: 0
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | pid: 492341
[2025-11-20 11:32:11] 2025-11-20 10:31:14,028 | INFO     | pgrp: 492341
[2025-11-20 11:32:11] 2025-11-20 10:31:14,029 | INFO     | corecount: 4
[2025-11-20 11:32:11] 2025-11-20 10:31:14,029 | INFO     | event service: False
[2025-11-20 11:32:11] 2025-11-20 10:31:14,029 | INFO     | sizes: {0: 2297203, 3: 2297465, 11: 2297493, 24316: 2333915, 24317: 2333914, 24318: 2343154, 24324: 2343408}
[2025-11-20 11:32:11] 2025-11-20 10:31:14,029 | INFO     | --------------------------------------------------
[2025-11-20 11:32:11] 2025-11-20 10:31:14,029 | INFO     | 
[2025-11-20 11:32:11] 2025-11-20 10:31:14,029 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-20 11:32:11] 2025-11-20 10:31:14,046 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | job 6891596452 has completed (purged errors)
[2025-11-20 11:32:11] 2025-11-20 10:31:14,047 | INFO     | overall cleanup function is called
[2025-11-20 11:32:11] 2025-11-20 10:31:15,053 | INFO     | --- collectZombieJob: --- 10, [492341]
[2025-11-20 11:32:11] 2025-11-20 10:31:15,053 | INFO     | zombie collector waiting for pid 492341
[2025-11-20 11:32:11] 2025-11-20 10:31:15,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 11:32:11] 2025-11-20 10:31:15,054 | INFO     | collected zombie processes
[2025-11-20 11:32:11] 2025-11-20 10:31:15,054 | INFO     | will attempt to kill all subprocesses of pid=492341
[2025-11-20 11:32:11] 2025-11-20 10:31:15,097 | INFO     | process IDs to be killed: [492341] (in reverse order)
[2025-11-20 11:32:11] 2025-11-20 10:31:15,129 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 11:32:11] 2025-11-20 10:31:15,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 11:32:11] 2025-11-20 10:31:15,130 | INFO     | did not find any defunct processes belonging to 492341
[2025-11-20 11:32:11] 2025-11-20 10:31:15,132 | INFO     | did not find any defunct processes belonging to 492341
[2025-11-20 11:32:11] 2025-11-20 10:31:15,132 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 11:32:11] 2025-11-20 10:31:15,132 | INFO     | ready for new job
[2025-11-20 11:32:11] 2025-11-20 10:31:15,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 11:32:11] 2025-11-20 10:31:15,134 | INFO     | ***************************************
[2025-11-20 11:32:11] 2025-11-20 10:31:15,134 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 11:32:11] 2025-11-20 10:31:15,134 | INFO     | ***************************************
[2025-11-20 11:32:11] 2025-11-20 10:31:15,134 | INFO     | 
[2025-11-20 11:32:11] 2025-11-20 10:31:15,134 | INFO     | architecture information:
[2025-11-20 11:32:11] 2025-11-20 10:31:15,135 | INFO     | executing command: cat /etc/os-release
[2025-11-20 11:32:11] 2025-11-20 10:31:15,148 | INFO     | cat /etc/os-release:
[2025-11-20 11:32:11] NAME="CentOS Linux"
[2025-11-20 11:32:11] VERSION="7 (Core)"
[2025-11-20 11:32:11] ID="centos"
[2025-11-20 11:32:11] ID_LIKE="rhel fedora"
[2025-11-20 11:32:11] VERSION_ID="7"
[2025-11-20 11:32:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 11:32:11] ANSI_COLOR="0;31"
[2025-11-20 11:32:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 11:32:11] HOME_URL="https://www.centos.org/"
[2025-11-20 11:32:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 11:32:11] 
[2025-11-20 11:32:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 11:32:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 11:32:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 11:32:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 11:32:11] 
[2025-11-20 11:32:11] 2025-11-20 10:31:15,149 | INFO     | ***************************************
[2025-11-20 11:32:11] 2025-11-20 10:31:15,652 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-20 11:32:11] 2025-11-20 10:31:15,668 | INFO     | sufficient remaining disk space (325309169664 B)
[2025-11-20 11:32:11] 2025-11-20 10:31:15,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 11:32:11] 2025-11-20 10:31:15,668 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 11:32:11] 2025-11-20 10:31:15,668 | INFO     | update_server=False
[2025-11-20 11:32:11] 2025-11-20 10:31:15,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 11:32:11] 2025-11-20 10:31:15,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 11:32:11] 2025-11-20 10:31:15,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 11:32:11] 2025-11-20 10:31:15,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 11:32:11] 2025-11-20 10:31:15,669 | INFO     | aborting loop
[2025-11-20 11:32:11] 2025-11-20 10:31:15,939 | INFO     | all job control threads have been joined
[2025-11-20 11:32:11] 2025-11-20 10:31:15,959 | INFO     | all payload control threads have been joined
[2025-11-20 11:32:11] 2025-11-20 10:31:16,584 | INFO     | all data control threads have been joined
[2025-11-20 11:32:11] 2025-11-20 10:31:16,672 | INFO     | [job] retrieve thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:16,673 | INFO     | [job] queue monitor thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:16,674 | INFO     | [job] job monitor thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:16,942 | INFO     | [payload] validate_post thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:16,944 | INFO     | [job] control thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:16,965 | INFO     | [payload] control thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,176 | INFO     | [job] validate thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,316 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,590 | INFO     | [data] control thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,603 | INFO     | [data] copytool_in thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,674 | INFO     | [data] copytool_out thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,803 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:17,923 | INFO     | [payload] failed_post thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:18,084 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:18,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 11:32:11] 2025-11-20 10:31:22,166 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 11:32:11] 2025-11-20 10:31:45,462 | INFO     | PID=485765 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 11:32:11] 2025-11-20 10:31:45,462 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 11:32:11] 2025-11-20 10:31:45,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 11:32:11] 2025-11-20 10:31:45,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 11:32:11] 2025-11-20 10:32:03,877 | INFO     | [monitor] cgroup control has ended
[2025-11-20 11:32:11] 2025-11-20 10:32:05,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928787109696)>', '<ExcThread(monitor, started 139927408862976)>']
[2025-11-20 11:32:11] 2025-11-20 10:32:06,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 11:32:11] 2025-11-20 10:32:06,568 | INFO     | [monitor] control thread has ended
[2025-11-20 11:32:11] 2025-11-20 10:32:10,943 | INFO     | all workflow threads have been joined
[2025-11-20 11:32:11] 2025-11-20 10:32:10,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 11:32:11] 2025-11-20 10:32:10,943 | INFO     | traces error code: 0
[2025-11-20 11:32:11] 2025-11-20 10:32:10,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 11:32:11] 2025-11-20 10:32:11,020 [wrapper] ==== pilot stdout END ====
[2025-11-20 11:32:11] 2025-11-20 10:32:11,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 11:32:11] 2025-11-20 10:32:11,028 [wrapper] pilotpid: 485765
[2025-11-20 11:32:11] 2025-11-20 10:32:11,031 [wrapper] Pilot exit status: 0
[2025-11-20 11:32:11] 2025-11-20 10:32:11,042 [wrapper] pandaids: 6891596452
[2025-11-20 11:32:11] 2025-11-20 10:32:11,063 [wrapper] cleanup supervisor_pilot  537739 485766
[2025-11-20 11:32:11] 2025-11-20 10:32:11,067 [wrapper] Test setup, not cleaning
[2025-11-20 11:32:11] 2025-11-20 10:32:11,070 [wrapper] apfmon messages muted
[2025-11-20 11:32:11] 2025-11-20 10:32:11,073 [wrapper] ==== wrapper stdout END ====
[2025-11-20 11:32:11] 2025-11-20 10:32:11,077 [wrapper] ==== wrapper stderr END ====
[2025-11-20 11:32:11]  *** Error codes and diagnostics ***
[2025-11-20 11:32:11]     "exeErrorCode": 0,
[2025-11-20 11:32:11]     "exeErrorDiag": "",
[2025-11-20 11:32:11]     "pilotErrorCode": 0,
[2025-11-20 11:32:11]     "pilotErrorDiag": "",
[2025-11-20 11:32:11]  *** Listing of results directory ***
[2025-11-20 11:32:11] total 1310928
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc      5112 Nov 18 19:48 queuedata.json
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc    576529 Nov 18 19:50 pilot3.tar.gz
[2025-11-20 11:32:11] -rwx------ 1 boinc boinc     36292 Nov 18 19:51 runpilot2-wrapper.sh
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc       100 Nov 20 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 11:32:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 04:45 run_atlas
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc       105 Nov 20 04:45 job.xml
[2025-11-20 11:32:11] -rw-r--r-- 2 boinc boinc 409464477 Nov 20 04:45 EVNT.47493065._000786.pool.root.1
[2025-11-20 11:32:11] -rw-r--r-- 2 boinc boinc    590096 Nov 20 04:45 input.tar.gz
[2025-11-20 11:32:11] -rw-r--r-- 2 boinc boinc     15120 Nov 20 04:45 start_atlas.sh
[2025-11-20 11:32:11] drwxrwx--x 2 boinc boinc      4096 Nov 20 04:45 shared
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc         0 Nov 20 04:45 boinc_setup_complete
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc      6379 Nov 20 04:45 init_data.xml
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc         0 Nov 20 04:45 boinc_lockfile
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc      2773 Nov 20 04:45 pandaJob.out
[2025-11-20 11:32:11] -rw------- 1 boinc boinc    989427 Nov 20 04:45 agis_schedconf.cvmfs.json
[2025-11-20 11:32:11] drwx------ 5 boinc boinc      4096 Nov 20 04:45 pilot3
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc       531 Nov 20 11:26 boinc_task_state.xml
[2025-11-20 11:32:11] -rw------- 1 boinc boinc 919636228 Nov 20 11:30 HITS.47493068._006502.pool.root.1
[2025-11-20 11:32:11] -rw------- 1 boinc boinc      1031 Nov 20 11:31 memory_monitor_summary.json
[2025-11-20 11:32:11] -rw------- 1 boinc boinc   1525063 Nov 20 11:31 agis_ddmendpoints.agis.ALL.json
[2025-11-20 11:32:11] -rw------- 1 boinc boinc   1254667 Nov 20 11:31 log.47493068._006502.job.log.tgz.1
[2025-11-20 11:32:11] -rw------- 1 boinc boinc      8593 Nov 20 11:31 heartbeat.json
[2025-11-20 11:32:11] -rw------- 1 boinc boinc        95 Nov 20 11:31 pilot_heartbeat.json
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc      8192 Nov 20 11:32 boinc_mmap_file
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc        28 Nov 20 11:32 wrapper_checkpoint.txt
[2025-11-20 11:32:11] -rw------- 1 boinc boinc      4751 Nov 20 11:32 pilotlog.txt
[2025-11-20 11:32:11] -rw------- 1 boinc boinc   3430446 Nov 20 11:32 log.47493068._006502.job.log.1
[2025-11-20 11:32:11] -rw------- 1 boinc boinc       353 Nov 20 11:32 output.list
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc       620 Nov 20 11:32 runtime_log
[2025-11-20 11:32:11] -rw------- 1 boinc boinc   4700160 Nov 20 11:32 result.tar.gz
[2025-11-20 11:32:11] -rw------- 1 boinc boinc       669 Nov 20 11:32 sJyNDmcyff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHjFKDm4FpYEm.diag
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc      8798 Nov 20 11:32 runtime_log.err
[2025-11-20 11:32:11] -rw-r--r-- 1 boinc boinc     21255 Nov 20 11:32 stderr.txt
[2025-11-20 11:32:11] HITS file was successfully produced:
[2025-11-20 11:32:11] -rw------- 1 boinc boinc 919636228 Nov 20 11:30 shared/HITS.pool.root.1
[2025-11-20 11:32:11]  *** Contents of shared directory: ***
[2025-11-20 11:32:11] total 1303148
[2025-11-20 11:32:11] -rw-r--r-- 2 boinc boinc 409464477 Nov 20 04:45 ATLAS.root_0
[2025-11-20 11:32:11] -rw-r--r-- 2 boinc boinc    590096 Nov 20 04:45 input.tar.gz
[2025-11-20 11:32:11] -rw-r--r-- 2 boinc boinc     15120 Nov 20 04:45 start_atlas.sh
[2025-11-20 11:32:11] -rw------- 1 boinc boinc 919636228 Nov 20 11:30 HITS.pool.root.1
[2025-11-20 11:32:11] -rw------- 1 boinc boinc   4700160 Nov 20 11:32 result.tar.gz
11:32:12 (481962): run_atlas exited; CPU time 95240.117652
11:32:12 (481962): called boinc_finish(0)

</stderr_txt>
]]>

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