Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:49:06 (2668): wrapper (7.7.26015): starting
23:49:06 (2668): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 23:49:06] Arguments: --nthreads 8
[2025-11-21 23:49:06] Threads: 8
[2025-11-21 23:49:06] Checking for CVMFS
[2025-11-21 23:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 23:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 23:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 23:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 23:49:06] 2.11.2.0 1205 278617 145824 153147 0 284 14507847 25165825 4100 130560 3 128073877 99.872 72367177 2979 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 23:49:06] CVMFS is ok
[2025-11-21 23:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 23:49:06] Checking for apptainer binary...
[2025-11-21 23:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 23:49:06] Running /usr/bin/apptainer --version
[2025-11-21 23:49:07] apptainer version 1.3.2-1.el7
[2025-11-21 23:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 23:49:08] cg-vwn325.simple-grid.lan
[2025-11-21 23:49:08] apptainer works
[2025-11-21 23:49:08] Set ATHENA_PROC_NUMBER=8
[2025-11-21 23:49:08] Set ATHENA_CORE_NUMBER=8
[2025-11-21 23:49:08] Starting ATLAS job with PandaID=6891597211
[2025-11-21 23:49:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:35:21]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:35:21] 2025-11-23 00:34:05,775 | INFO     | monitor loop #6162: job 0:6891597211 is in state 'finished'
[2025-11-23 01:35:21] 2025-11-23 00:34:05,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:35:21] 2025-11-23 00:34:07,287 | INFO     | time since job start (92678s) is within the limit (172800.0s)
[2025-11-23 01:35:21] 2025-11-23 00:34:08,284 | INFO     | monitor loop #6163: job 0:6891597211 is in state 'finished'
[2025-11-23 01:35:21] 2025-11-23 00:34:08,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:35:21] 2025-11-23 00:34:09,294 | INFO     | time since job start (92680s) is within the limit (172800.0s)
[2025-11-23 01:35:21] 2025-11-23 00:34:09,295 | INFO     | 92682s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-23 01:35:21] 2025-11-23 00:34:10,795 | INFO     | monitor loop #6164: job 0:6891597211 is in state 'finished'
[2025-11-23 01:35:21] 2025-11-23 00:34:10,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:35:21] 2025-11-23 00:34:11,301 | INFO     | time since job start (92682s) is within the limit (172800.0s)
[2025-11-23 01:35:21] 2025-11-23 00:34:13,306 | INFO     | monitor loop #6165: job 0:6891597211 is in state 'finished'
[2025-11-23 01:35:21] 2025-11-23 00:34:13,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:35:21] 2025-11-23 00:34:13,310 | INFO     | time since job start (92684s) is within the limit (172800.0s)
[2025-11-23 01:35:21] 2025-11-23 00:34:15,318 | INFO     | time since job start (92686s) is within the limit (172800.0s)
[2025-11-23 01:35:21] 2025-11-23 00:34:15,815 | INFO     | monitor loop #6166: job 0:6891597211 is in state 'finished'
[2025-11-23 01:35:21] 2025-11-23 00:34:15,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:35:21] 2025-11-23 00:34:16,361 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:35:21] 2025-11-23 00:34:16,362 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 01:35:21] 2025-11-23 00:34:16,364 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6891597211/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:35:21] 2025-11-23 00:34:16,365 | INFO     | extracted standard info from prmon json
[2025-11-23 01:35:21] 2025-11-23 00:34:16,365 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:35:21] 2025-11-23 00:34:16,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:35:21] 2025-11-23 00:34:16,402 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:35:21] 2025-11-23 00:34:16,405 | INFO     | sum of square deviations: 1082516843669.3916
[2025-11-23 01:35:21] 2025-11-23 00:34:16,477 | INFO     | sum of deviations: 2513229975630.348
[2025-11-23 01:35:21] 2025-11-23 00:34:16,477 | INFO     | mean x: 1763811668.2333553
[2025-11-23 01:35:21] 2025-11-23 00:34:16,478 | INFO     | mean y: 2857505.439683586
[2025-11-23 01:35:21] 2025-11-23 00:34:16,478 | INFO     | intersect: -4092103586.2922688
[2025-11-23 01:35:21] 2025-11-23 00:34:16,480 | INFO     | chi2: 17.051564406576972
[2025-11-23 01:35:21] 2025-11-23 00:34:16,482 | INFO     | sum of square deviations: 1071848786376.7614
[2025-11-23 01:35:21] 2025-11-23 00:34:16,549 | INFO     | sum of deviations: 3008683832961.4453
[2025-11-23 01:35:21] 2025-11-23 00:34:16,550 | INFO     | mean x: 1763811515.737434
[2025-11-23 01:35:21] 2025-11-23 00:34:16,550 | INFO     | mean y: 2864586.8525132276
[2025-11-23 01:35:21] 2025-11-23 00:34:16,550 | INFO     | intersect: -4948161396.699876
[2025-11-23 01:35:21] 2025-11-23 00:34:16,552 | INFO     | chi2: 13.90740138668328
[2025-11-23 01:35:21] 2025-11-23 00:34:16,553 | INFO     | current chi2=13.90740138668328 (change=18.439146959917384 %)
[2025-11-23 01:35:21] 2025-11-23 00:34:16,553 | INFO     | right removable region: 1511
[2025-11-23 01:35:21] 2025-11-23 00:34:16,555 | INFO     | sum of square deviations: 1071847645066.7599
[2025-11-23 01:35:21] 2025-11-23 00:34:16,622 | INFO     | sum of deviations: 2026247609671.2822
[2025-11-23 01:35:21] 2025-11-23 00:34:16,622 | INFO     | mean x: 1763811820.737434
[2025-11-23 01:35:21] 2025-11-23 00:34:16,623 | INFO     | mean y: 2864463.6858465606
[2025-11-23 01:35:21] 2025-11-23 00:34:16,623 | INFO     | intersect: -3331489539.07597
[2025-11-23 01:35:21] 2025-11-23 00:34:16,624 | INFO     | chi2: 14.371056356012746
[2025-11-23 01:35:21] 2025-11-23 00:34:16,625 | INFO     | current chi2=14.371056356012746 (change=15.720012467186445 %)
[2025-11-23 01:35:21] 2025-11-23 00:34:16,625 | INFO     | left removable region: 10
[2025-11-23 01:35:21] 2025-11-23 00:34:16,627 | INFO     | sum of square deviations: 1048624459800.2424
[2025-11-23 01:35:21] 2025-11-23 00:34:16,691 | INFO     | sum of deviations: 2481920324620.301
[2025-11-23 01:35:21] 2025-11-23 00:34:16,691 | INFO     | mean x: 1763811790.2431712
[2025-11-23 01:35:21] 2025-11-23 00:34:16,692 | INFO     | mean y: 2875323.10326449
[2025-11-23 01:35:21] 2025-11-23 00:34:16,692 | INFO     | intersect: -4171774896.14049
[2025-11-23 01:35:21] 2025-11-23 00:34:16,693 | INFO     | chi2: 10.228139084968891
[2025-11-23 01:35:21] 2025-11-23 00:34:16,694 | INFO     | current memory leak: 2.37 B/s (using 1501 data points, chi2=10.23)
[2025-11-23 01:35:21] 2025-11-23 00:34:16,696 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-23 01:35:21] 2025-11-23 00:34:16,696 | INFO     | ..............................
[2025-11-23 01:35:21] 2025-11-23 00:34:16,696 | INFO     | . Timing measurements:
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | . get job = 0 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | . initial setup = 2 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | . payload setup = 11 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | . stage-in = 0 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | . payload execution = 92547 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | . stage-out = 5 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | . log creation = 2 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,697 | INFO     | ..............................
[2025-11-23 01:35:21] 2025-11-23 00:34:16,822 | INFO     | 
[2025-11-23 01:35:21] 2025-11-23 00:34:16,822 | INFO     | job summary report
[2025-11-23 01:35:21] 2025-11-23 00:34:16,822 | INFO     | --------------------------------------------------
[2025-11-23 01:35:21] 2025-11-23 00:34:16,822 | INFO     | PanDA job id: 6891597211
[2025-11-23 01:35:21] 2025-11-23 00:34:16,822 | INFO     | task id: 47493068
[2025-11-23 01:35:21] 2025-11-23 00:34:16,822 | INFO     | errors: (none)
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | pilot state: finished 
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | transexitcode: 0
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | exeerrorcode: 0
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | exeerrordiag: 
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | exitcode: 0
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | exitmsg: OK
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | cpuconsumptiontime: 346896 s
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | nevents: 1000
[2025-11-23 01:35:21] 2025-11-23 00:34:16,823 | INFO     | neventsw: 0
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | pid: 12923
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | pgrp: 12923
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | corecount: 8
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | event service: False
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | sizes: {0: 2298626, 1: 2298825, 10: 2299087, 12: 2299115, 92563: 2363485, 92569: 2372481, 92570: 2372665, 92667: 2372911}
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | --------------------------------------------------
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | 
[2025-11-23 01:35:21] 2025-11-23 00:34:16,824 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-11-23 01:35:21] 2025-11-23 00:34:17,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,084 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:35:21] 2025-11-23 00:34:17,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:35:21] 2025-11-23 00:34:17,084 | INFO     | job 6891597211 has completed (purged errors)
[2025-11-23 01:35:21] 2025-11-23 00:34:17,084 | INFO     | overall cleanup function is called
[2025-11-23 01:35:21] 2025-11-23 00:34:18,109 | INFO     | --- collectZombieJob: --- 10, [12923]
[2025-11-23 01:35:21] 2025-11-23 00:34:18,110 | INFO     | zombie collector waiting for pid 12923
[2025-11-23 01:35:21] 2025-11-23 00:34:18,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:35:21] 2025-11-23 00:34:18,110 | INFO     | collected zombie processes
[2025-11-23 01:35:21] 2025-11-23 00:34:18,110 | INFO     | will attempt to kill all subprocesses of pid=12923
[2025-11-23 01:35:21] 2025-11-23 00:34:18,242 | INFO     | process IDs to be killed: [12923] (in reverse order)
[2025-11-23 01:35:21] 2025-11-23 00:34:18,736 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:35:21] 2025-11-23 00:34:18,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:35:21] 2025-11-23 00:34:18,740 | INFO     | did not find any defunct processes belonging to 12923
[2025-11-23 01:35:21] 2025-11-23 00:34:18,743 | INFO     | did not find any defunct processes belonging to 12923
[2025-11-23 01:35:21] 2025-11-23 00:34:18,797 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:35:21] 2025-11-23 00:34:18,798 | INFO     | ready for new job
[2025-11-23 01:35:21] 2025-11-23 00:34:18,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:35:21] 2025-11-23 00:34:18,805 | INFO     | ***************************************
[2025-11-23 01:35:21] 2025-11-23 00:34:18,805 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:35:21] 2025-11-23 00:34:18,805 | INFO     | ***************************************
[2025-11-23 01:35:21] 2025-11-23 00:34:18,805 | INFO     | 
[2025-11-23 01:35:21] 2025-11-23 00:34:18,806 | INFO     | pilot is running in a VM
[2025-11-23 01:35:21] 2025-11-23 00:34:18,806 | INFO     | architecture information:
[2025-11-23 01:35:21] 2025-11-23 00:34:18,813 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:35:21] 2025-11-23 00:34:19,049 | INFO     | cat /etc/os-release:
[2025-11-23 01:35:21] NAME="CentOS Linux"
[2025-11-23 01:35:21] VERSION="7 (Core)"
[2025-11-23 01:35:21] ID="centos"
[2025-11-23 01:35:21] ID_LIKE="rhel fedora"
[2025-11-23 01:35:21] VERSION_ID="7"
[2025-11-23 01:35:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:35:21] ANSI_COLOR="0;31"
[2025-11-23 01:35:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:35:21] HOME_URL="https://www.centos.org/"
[2025-11-23 01:35:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:35:21] 
[2025-11-23 01:35:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:35:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:35:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:35:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:35:21] 
[2025-11-23 01:35:21] 2025-11-23 00:34:19,050 | INFO     | ***************************************
[2025-11-23 01:35:21] 2025-11-23 00:34:19,553 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-11-23 01:35:21] 2025-11-23 00:34:19,799 | INFO     | sufficient remaining disk space (494997078016 B)
[2025-11-23 01:35:21] 2025-11-23 00:34:19,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:35:21] 2025-11-23 00:34:19,799 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:35:21] 2025-11-23 00:34:19,799 | INFO     | update_server=False
[2025-11-23 01:35:21] 2025-11-23 00:34:19,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:35:21] 2025-11-23 00:34:19,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:35:21] 2025-11-23 00:34:19,800 | INFO     | aborting loop
[2025-11-23 01:35:21] 2025-11-23 00:34:19,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:35:21] 2025-11-23 00:34:19,975 | INFO     | all data control threads have been joined
[2025-11-23 01:35:21] 2025-11-23 00:34:20,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:35:21] 2025-11-23 00:34:20,575 | INFO     | all payload control threads have been joined
[2025-11-23 01:35:21] 2025-11-23 00:34:20,805 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:20,806 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:20,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:20,981 | INFO     | [data] control thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,406 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,509 | INFO     | all job control threads have been joined
[2025-11-23 01:35:21] 2025-11-23 00:34:21,547 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,581 | INFO     | [payload] control thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,662 | INFO     | [job] validate thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,792 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,814 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,815 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,831 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:21,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:35:21] 2025-11-23 00:34:22,242 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:22,515 | INFO     | [job] control thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:22,842 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:24,560 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:35:21] 2025-11-23 00:34:48,530 | INFO     | PID=6422 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 01:35:21] 2025-11-23 00:34:48,530 | INFO     | .. there are 9 such processes running
[2025-11-23 01:35:21] 2025-11-23 00:34:48,530 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:35:21] 2025-11-23 00:34:48,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:35:21] 2025-11-23 00:34:48,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:35:21] 2025-11-23 00:35:10,890 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:35:21] 2025-11-23 00:35:12,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893484345152)>', '<ExcThread(monitor, started 139893049124608)>']
[2025-11-23 01:35:21] 2025-11-23 00:35:12,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:35:21] 2025-11-23 00:35:12,672 | INFO     | [monitor] control thread has ended
[2025-11-23 01:35:21] 2025-11-23 00:35:17,454 | INFO     | all workflow threads have been joined
[2025-11-23 01:35:21] 2025-11-23 00:35:17,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:35:21] 2025-11-23 00:35:17,455 | INFO     | traces error code: 0
[2025-11-23 01:35:21] 2025-11-23 00:35:17,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:35:21] 2025-11-23 00:35:17,982 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:35:21] 2025-11-23 00:35:18,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:35:21] 2025-11-23 00:35:18,153 [wrapper] pilotpid: 6422
[2025-11-23 01:35:21] 2025-11-23 00:35:18,216 [wrapper] Pilot exit status: 0
[2025-11-23 01:35:21] 2025-11-23 00:35:18,606 [wrapper] pandaids: 6891597211
[2025-11-23 01:35:21] 2025-11-23 00:35:19,175 [wrapper] cleanup supervisor_pilot 11334 6423
[2025-11-23 01:35:21] 2025-11-23 00:35:19,254 [wrapper] Test setup, not cleaning
[2025-11-23 01:35:21] 2025-11-23 00:35:19,349 [wrapper] apfmon messages muted
[2025-11-23 01:35:21] 2025-11-23 00:35:19,458 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:35:21] 2025-11-23 00:35:19,542 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:35:21]  *** Error codes and diagnostics ***
[2025-11-23 01:35:21]     "exeErrorCode": 0,
[2025-11-23 01:35:21]     "exeErrorDiag": "",
[2025-11-23 01:35:21]     "pilotErrorCode": 0,
[2025-11-23 01:35:21]     "pilotErrorDiag": "",
[2025-11-23 01:35:21]  *** Listing of results directory ***
[2025-11-23 01:35:21] total 1337544
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc    576529 Nov 18 19:50 pilot3.tar.gz
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc      5112 Nov 18 19:55 queuedata.json
[2025-11-23 01:35:21] -rwx------. 1 boinc boinc     36292 Nov 18 19:56 runpilot2-wrapper.sh
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc       100 Nov 21 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:35:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 23:49 run_atlas
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc       105 Nov 21 23:49 job.xml
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc      6391 Nov 21 23:49 init_data.xml
[2025-11-23 01:35:21] -rw-r--r--. 2 boinc boinc 409706194 Nov 21 23:49 EVNT.47493065._000797.pool.root.1
[2025-11-23 01:35:21] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:49 start_atlas.sh
[2025-11-23 01:35:21] drwxrwx--x. 2 boinc boinc        68 Nov 21 23:49 shared
[2025-11-23 01:35:21] -rw-r--r--. 2 boinc boinc    590093 Nov 21 23:49 input.tar.gz
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc         0 Nov 21 23:49 boinc_lockfile
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc      2773 Nov 21 23:49 pandaJob.out
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc    989798 Nov 21 23:49 agis_schedconf.cvmfs.json
[2025-11-23 01:35:21] drwx------. 5 boinc boinc      4096 Nov 21 23:49 pilot3
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc       533 Nov 23 01:05 boinc_task_state.xml
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc 926259904 Nov 23 01:31 HITS.47493068._006612.pool.root.1
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc      1032 Nov 23 01:32 memory_monitor_summary.json
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc   1526164 Nov 23 01:32 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc   2566478 Nov 23 01:32 log.47493068._006612.job.log.tgz.1
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc        95 Nov 23 01:34 pilot_heartbeat.json
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc      8626 Nov 23 01:34 heartbeat.json
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc      8192 Nov 23 01:34 boinc_mmap_file
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc        29 Nov 23 01:34 wrapper_checkpoint.txt
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc      4884 Nov 23 01:35 pilotlog.txt
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc  12318432 Nov 23 01:35 log.47493068._006612.job.log.1
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc       353 Nov 23 01:35 output.list
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc       620 Nov 23 01:35 runtime_log
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc  14909440 Nov 23 01:35 result.tar.gz
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc      8717 Nov 23 01:35 runtime_log.err
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc       662 Nov 23 01:35 4QnLDmA3ff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVMGKDmec1Lym.diag
[2025-11-23 01:35:21] -rw-r--r--. 1 boinc boinc     21417 Nov 23 01:35 stderr.txt
[2025-11-23 01:35:21] HITS file was successfully produced:
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc 926259904 Nov 23 01:31 shared/HITS.pool.root.1
[2025-11-23 01:35:21]  *** Contents of shared directory: ***
[2025-11-23 01:35:21] total 1319812
[2025-11-23 01:35:21] -rw-r--r--. 2 boinc boinc 409706194 Nov 21 23:49 ATLAS.root_0
[2025-11-23 01:35:21] -rw-r--r--. 2 boinc boinc     15120 Nov 21 23:49 start_atlas.sh
[2025-11-23 01:35:21] -rw-r--r--. 2 boinc boinc    590093 Nov 21 23:49 input.tar.gz
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc 926259904 Nov 23 01:31 HITS.pool.root.1
[2025-11-23 01:35:21] -rw-------. 1 boinc boinc  14909440 Nov 23 01:35 result.tar.gz
01:35:23 (2668): run_atlas exited; CPU time 347444.037457
01:35:23 (2668): called boinc_finish(0)

</stderr_txt>
]]>

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