Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:14:20 (2850736): wrapper (7.7.26015): starting
16:14:20 (2850736): wrapper: running run_atlas (--nthreads 12)
[2025-11-18 16:14:20] Arguments: --nthreads 12
[2025-11-18 16:14:20] Threads: 12
[2025-11-18 16:14:20] Checking for CVMFS
[2025-11-18 16:14:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 16:14:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 16:14:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 16:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 16:14:22] 2.11.5.0 2081521 17528 247152 153021 1 330 38307330 45568001 13263 130560 0 105816147 99.789 62354849 16774 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-18 16:14:22] CVMFS is ok
[2025-11-18 16:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 16:14:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 16:14:22] Further information can be found at the LHC@home message board.
[2025-11-18 16:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 16:14:22] Checking for apptainer binary...
[2025-11-18 16:14:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 16:14:22] Running /usr/bin/apptainer --version
[2025-11-18 16:14:22] apptainer version 1.4.1-1.el9
[2025-11-18 16:14:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 16:14:23] wns0041.triumf.lcg
[2025-11-18 16:14:23] apptainer works
[2025-11-18 16:14:23] Set ATHENA_PROC_NUMBER=12
[2025-11-18 16:14:23] Set ATHENA_CORE_NUMBER=12
[2025-11-18 16:14:23] Starting ATLAS job with PandaID=6891590315
[2025-11-18 16:14:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-18 16:26:06]  *** The last 200 lines of the pilot log: ***
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | . Timing measurements:
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | . get job = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . initial setup = 5 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . payload setup = 44 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . stage-in = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . payload execution = 394 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . stage-out = 1 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . log creation = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | ..............................
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 16:26:06] 2025-11-19 00:25:31,883 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891590315/pilotlog.txt
[2025-11-18 16:26:06] 2025-11-19 00:25:31,912 | INFO     | monitor loop #106: job 0:6891590315 is in state 'failed'
[2025-11-18 16:26:06] 2025-11-19 00:25:31,913 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-18 16:26:06] 2025-11-19 00:25:32,007 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-18 16:26:06] - Log from pilotlog.txt -
[2025-11-18 16:26:06] 2025-11-19 00:25:31,877 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 16:26:06] 2025-11-19 00:25:31,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 16:26:06] 2025-11-19 00:25:31,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 16:26:06] 2025-11-19 00:25:31,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 16:26:06] 2025-11-19 00:25:31,878 | WARNING  | wrong length of table data, x=[1763511424.0, 1763511485.0, 1763511546.0, 1763511607.0, 1763511668.0, 1763511729.0], y=[1925.0, 186625.0, 335528.0, 463283.0, 630505
[2025-11-18 16:26:06] 2025-11-19 00:25:31,879 | INFO     | could have reported an average CPU frequency of 1284 MHz (4 samples)
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | ..............................
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | . Timing measurements:
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | . get job = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . initial setup = 5 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . payload setup = 44 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . stage-in = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . payload execution = 394 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . stage-out = 1 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . log creation = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | ..............................
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 16:26:06] 2025-11-19 00:25:31,883 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891590315/pilotlog.txt
[2025-11-18 16:26:06] 2025-11-19 00:25:31,912 | INFO     | monitor loop #106: job 0:6891590315 is in state 'failed'
[2025-11-18 16:26:06] 2025-11-19 00:25:31,913 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-18 16:26:06] 2025-11-19 00:25:32,008 | WARNING  | 
[2025-11-18 16:26:06] [begin log extracts]
[2025-11-18 16:26:06] - Log from pilotlog.txt -
[2025-11-18 16:26:06] 2025-11-19 00:25:31,877 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 16:26:06] 2025-11-19 00:25:31,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 16:26:06] 2025-11-19 00:25:31,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 16:26:06] 2025-11-19 00:25:31,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 16:26:06] 2025-11-19 00:25:31,878 | WARNING  | wrong length of table data, x=[1763511424.0, 1763511485.0, 1763511546.0, 1763511607.0, 1763511668.0, 1763511729.0], y=[1925.0, 186625.0, 335528.0, 463283.0, 630505
[2025-11-18 16:26:06] 2025-11-19 00:25:31,879 | INFO     | could have reported an average CPU frequency of 1284 MHz (4 samples)
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | ..............................
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | . Timing measurements:
[2025-11-18 16:26:06] 2025-11-19 00:25:31,880 | INFO     | . get job = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . initial setup = 5 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . payload setup = 44 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . stage-in = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . payload execution = 394 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . stage-out = 1 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | . log creation = 0 s
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | ..............................
[2025-11-18 16:26:06] 2025-11-19 00:25:31,882 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 16:26:06] 2025-11-19 00:25:31,883 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891590315/pilotlog.txt
[2025-11-18 16:26:06] 2025-11-19 00:25:31,912 | INFO     | monitor loop #106: job 0:6891590315 is in state 'failed'
[2025-11-18 16:26:06] 2025-11-19 00:25:31,913 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-18 16:26:06] [end log extracts]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,008 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-18 16:26:06] 2025-11-19 00:25:32,009 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-18 16:26:06] 2025-11-19 00:25:32,467 | INFO     | 
[2025-11-18 16:26:06] 2025-11-19 00:25:32,467 | INFO     | job summary report
[2025-11-18 16:26:06] 2025-11-19 00:25:32,467 | INFO     | --------------------------------------------------
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | PanDA job id: 6891590315
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | task id: 47493068
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-18 16:23:03,470 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | pilot state: failed 
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | transexitcode: 65
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | exeerrorcode: 65
[2025-11-18 16:26:06] 2025-11-19 00:25:32,468 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | exitcode: 65
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | cpuconsumptiontime: 88 s
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | nevents: 0
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | neventsw: 0
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | pid: 2875593
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | pgrp: 2875593
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | corecount: 12
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | event service: False
[2025-11-18 16:26:06] 2025-11-19 00:25:32,469 | INFO     | sizes: {0: 2296372, 1: 2297054, 2: 2297253, 3: 2297253, 14: 2297281, 23: 2297571, 25: 2297727, 442: 2323341, 445: 2327687, 582: 2327825}
[2025-11-18 16:26:06] 2025-11-19 00:25:32,470 | INFO     | --------------------------------------------------
[2025-11-18 16:26:06] 2025-11-19 00:25:32,470 | INFO     | 
[2025-11-18 16:26:06] 2025-11-19 00:25:32,470 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-18 16:26:06] 2025-11-19 00:25:32,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-18 16:26:06] 2025-11-19 00:25:32,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-18 16:26:06] 2025-11-19 00:25:32,679 | INFO     | job 6891590315 has completed (purged errors)
[2025-11-18 16:26:06] 2025-11-19 00:25:32,679 | INFO     | overall cleanup function is called
[2025-11-18 16:26:06] 2025-11-19 00:25:33,250 | INFO     | PID=2857516 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-18 16:26:06] 2025-11-19 00:25:33,251 | INFO     | .. there are 28 such processes running
[2025-11-18 16:26:06] 2025-11-19 00:25:33,689 | INFO     | --- collectZombieJob: --- 10, [2875593]
[2025-11-18 16:26:06] 2025-11-19 00:25:33,689 | INFO     | zombie collector waiting for pid 2875593
[2025-11-18 16:26:06] 2025-11-19 00:25:33,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-18 16:26:06] 2025-11-19 00:25:33,689 | INFO     | collected zombie processes
[2025-11-18 16:26:06] 2025-11-19 00:25:33,690 | INFO     | will attempt to kill all subprocesses of pid=2875593
[2025-11-18 16:26:06] 2025-11-19 00:25:34,513 | INFO     | process IDs to be killed: [2875593] (in reverse order)
[2025-11-18 16:26:06] 2025-11-19 00:25:34,704 | WARNING  | found no corresponding commands to process id(s)
[2025-11-18 16:26:06] 2025-11-19 00:25:34,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-18 16:26:06] 2025-11-19 00:25:34,752 | INFO     | did not find any defunct processes belonging to 2875593
[2025-11-18 16:26:06] 2025-11-19 00:25:34,772 | INFO     | did not find any defunct processes belonging to 2875593
[2025-11-18 16:26:06] 2025-11-19 00:25:34,782 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-18 16:26:06] 2025-11-19 00:25:34,782 | INFO     | ready for new job
[2025-11-18 16:26:06] 2025-11-19 00:25:34,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-18 16:26:06] 2025-11-19 00:25:34,784 | INFO     | ***************************************
[2025-11-18 16:26:06] 2025-11-19 00:25:34,785 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-18 16:26:06] 2025-11-19 00:25:34,785 | INFO     | ***************************************
[2025-11-18 16:26:06] 2025-11-19 00:25:34,807 | INFO     | 
[2025-11-18 16:26:06] 2025-11-19 00:25:34,832 | INFO     | architecture information:
[2025-11-18 16:26:06] 2025-11-19 00:25:34,845 | INFO     | executing command: cat /etc/os-release
[2025-11-18 16:26:06] 2025-11-19 00:25:34,923 | INFO     | cat /etc/os-release:
[2025-11-18 16:26:06] NAME="CentOS Linux"
[2025-11-18 16:26:06] VERSION="7 (Core)"
[2025-11-18 16:26:06] ID="centos"
[2025-11-18 16:26:06] ID_LIKE="rhel fedora"
[2025-11-18 16:26:06] VERSION_ID="7"
[2025-11-18 16:26:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-18 16:26:06] ANSI_COLOR="0;31"
[2025-11-18 16:26:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-18 16:26:06] HOME_URL="https://www.centos.org/"
[2025-11-18 16:26:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-18 16:26:06] 
[2025-11-18 16:26:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-18 16:26:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-18 16:26:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-18 16:26:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-18 16:26:06] 
[2025-11-18 16:26:06] 2025-11-19 00:25:34,924 | INFO     | ***************************************
[2025-11-18 16:26:06] 2025-11-19 00:25:35,427 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-18 16:26:06] 2025-11-19 00:25:35,466 | INFO     | sufficient remaining disk space (2028196593664 B)
[2025-11-18 16:26:06] 2025-11-19 00:25:35,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-18 16:26:06] 2025-11-19 00:25:35,467 | INFO     | current server update state: UPDATING_FINAL
[2025-11-18 16:26:06] 2025-11-19 00:25:35,467 | INFO     | update_server=False
[2025-11-18 16:26:06] 2025-11-19 00:25:35,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-18 16:26:06] 2025-11-19 00:25:35,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-18 16:26:06] 2025-11-19 00:25:35,469 | INFO     | aborting loop
[2025-11-18 16:26:06] 2025-11-19 00:25:35,581 | INFO     | all job control threads have been joined
[2025-11-18 16:26:06] 2025-11-19 00:25:35,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-18 16:26:06] 2025-11-19 00:25:36,021 | INFO     | all data control threads have been joined
[2025-11-18 16:26:06] 2025-11-19 00:25:36,479 | INFO     | [job] job monitor thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:36,483 | INFO     | [job] retrieve thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:36,575 | INFO     | all payload control threads have been joined
[2025-11-18 16:26:06] 2025-11-19 00:25:36,584 | INFO     | [payload] validate_pre thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:36,588 | INFO     | [job] control thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:36,593 | INFO     | [payload] validate_post thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:36,594 | INFO     | [payload] failed_post thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:36,631 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:36,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-18 16:26:06] 2025-11-19 00:25:37,027 | INFO     | [data] control thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:37,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-18 16:26:06] 2025-11-19 00:25:37,472 | INFO     | [payload] execute_payloads thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:37,581 | INFO     | [payload] control thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:37,583 | INFO     | [data] copytool_in thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:37,655 | INFO     | [job] validate thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:37,749 | INFO     | [data] copytool_out thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:37,958 | INFO     | [job] create_data_payload thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:38,473 | INFO     | [job] queue monitor thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:40,799 | INFO     | [data] queue_monitor thread has finished
[2025-11-18 16:26:06] 2025-11-19 00:25:58,154 | INFO     | [monitor] cgroup control has ended
[2025-11-18 16:26:06] 2025-11-19 00:26:00,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275777738560)>', '<ExcThread(monitor, started 140275066316544)>']
[2025-11-18 16:26:06] 2025-11-19 00:26:05,078 | INFO     | all workflow threads have been joined
[2025-11-18 16:26:06] 2025-11-19 00:26:05,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-18 16:26:06] 2025-11-19 00:26:05,079 | INFO     | traces error code: 0
[2025-11-18 16:26:06] 2025-11-19 00:26:05,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-18 16:26:06] 2025-11-19 00:26:05,861 | INFO     | PID=2857516 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-18 16:26:06] 2025-11-19 00:26:05,862 | INFO     | .. there are 28 such processes running
[2025-11-18 16:26:06] 2025-11-19 00:26:05,863 | INFO     | found 0 job(s) in 20 queues
[2025-11-18 16:26:06] 2025-11-19 00:26:05,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-18 16:26:06] 2025-11-19 00:26:05,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-18 16:26:06] 2025-11-19 00:26:05,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-18 16:26:06] 2025-11-19 00:26:05,863 | INFO     | [monitor] control thread has ended
[2025-11-18 16:26:06] 2025-11-19 00:26:06,073 [wrapper] ==== pilot stdout END ====
[2025-11-18 16:26:06] 2025-11-19 00:26:06,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-18 16:26:06] 2025-11-19 00:26:06,081 [wrapper] pilotpid: 2857516
[2025-11-18 16:26:06] 2025-11-19 00:26:06,084 [wrapper] Pilot exit status: 0
[2025-11-18 16:26:06] 2025-11-19 00:26:06,153 [wrapper] pandaids: 6891590315
[2025-11-18 16:26:06] 2025-11-19 00:26:06,335 [wrapper] cleanup supervisor_pilot 2857522 2857517
[2025-11-18 16:26:06] 2025-11-19 00:26:06,340 [wrapper] Test setup, not cleaning
[2025-11-18 16:26:06] 2025-11-19 00:26:06,344 [wrapper] apfmon messages muted
[2025-11-18 16:26:06] 2025-11-19 00:26:06,349 [wrapper] ==== wrapper stdout END ====
[2025-11-18 16:26:06] 2025-11-19 00:26:06,353 [wrapper] ==== wrapper stderr END ====
[2025-11-18 16:26:06]  *** Error codes and diagnostics ***
[2025-11-18 16:26:06]     "exeErrorCode": 65,
[2025-11-18 16:26:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-18 16:26:06]     "pilotErrorCode": 1305,
[2025-11-18 16:26:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-18 16:26:06]  *** Listing of results directory ***
[2025-11-18 16:26:06] total 405124
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc    576529 Nov 18 09:46 pilot3.tar.gz
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc      5112 Nov 18 09:54 queuedata.json
[2025-11-18 16:26:06] -rwx------. 1 boinc boinc     36292 Nov 18 09:56 runpilot2-wrapper.sh
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc       100 Nov 18 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-18 16:26:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 16:14 run_atlas
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc       105 Nov 18 16:14 job.xml
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc      6595 Nov 18 16:14 init_data.xml
[2025-11-18 16:26:06] -rw-r--r--. 2 boinc boinc 410536906 Nov 18 16:14 EVNT.47493065._000545.pool.root.1
[2025-11-18 16:26:06] -rw-r--r--. 2 boinc boinc     15120 Nov 18 16:14 start_atlas.sh
[2025-11-18 16:26:06] drwxrwx--x. 2 boinc boinc      4096 Nov 18 16:14 shared
[2025-11-18 16:26:06] -rw-r--r--. 2 boinc boinc    590098 Nov 18 16:14 input.tar.gz
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc         0 Nov 18 16:14 boinc_lockfile
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc      2773 Nov 18 16:14 pandaJob.out
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc    992790 Nov 18 16:14 agis_schedconf.cvmfs.json
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc   1525063 Nov 18 16:14 agis_ddmendpoints.agis.ALL.json
[2025-11-18 16:26:06] drwx------. 5 boinc boinc      4096 Nov 18 16:14 pilot3
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc       525 Nov 18 16:23 boinc_task_state.xml
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc      1029 Nov 18 16:23 memory_monitor_summary.json
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc     53405 Nov 18 16:23 log.47493068._005446.job.log.tgz.1
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc     10359 Nov 18 16:25 heartbeat.json
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc      8192 Nov 18 16:26 boinc_mmap_file
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc        23 Nov 18 16:26 wrapper_checkpoint.txt
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc        95 Nov 18 16:26 pilot_heartbeat.json
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc       823 Nov 18 16:26 pilotlog.txt
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc    140636 Nov 18 16:26 log.47493068._005446.job.log.1
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc       186 Nov 18 16:26 output.list
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc       620 Nov 18 16:26 runtime_log
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc    215040 Nov 18 16:26 result.tar.gz
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc      8528 Nov 18 16:26 runtime_log.err
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc       647 Nov 18 16:26 m0jNDmV7ef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm08FKDmugpshn.diag
[2025-11-18 16:26:06] -rw-r--r--. 1 boinc boinc     22694 Nov 18 16:26 stderr.txt
[2025-11-18 16:26:06] No HITS result produced
[2025-11-18 16:26:06]  *** Contents of shared directory: ***
[2025-11-18 16:26:06] total 401728
[2025-11-18 16:26:06] -rw-r--r--. 2 boinc boinc 410536906 Nov 18 16:14 ATLAS.root_0
[2025-11-18 16:26:06] -rw-r--r--. 2 boinc boinc     15120 Nov 18 16:14 start_atlas.sh
[2025-11-18 16:26:06] -rw-r--r--. 2 boinc boinc    590098 Nov 18 16:14 input.tar.gz
[2025-11-18 16:26:06] -rw-------. 1 boinc boinc    215040 Nov 18 16:26 result.tar.gz
16:26:08 (2850736): run_atlas exited; CPU time 99.755076
16:26:08 (2850736): called boinc_finish(0)

</stderr_txt>
]]>

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