Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:22:51 (1635475): wrapper (7.7.26015): starting
01:22:51 (1635475): wrapper: running run_atlas (--nthreads 3)
[2025-11-19 01:22:51] Arguments: --nthreads 3
[2025-11-19 01:22:51] Threads: 3
[2025-11-19 01:22:51] Checking for CVMFS
[2025-11-19 01:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 01:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 01:22:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 01:22:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 01:22:51] 2.9.2.0 4099368 364 70400 153023 1 88 34187936 36864000 0 130560 0 5198648 99.973 146732 7843 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-19 01:22:51] CVMFS is ok
[2025-11-19 01:22:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 01:22:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 01:22:51] Further information can be found at the LHC@home message board.
[2025-11-19 01:22:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 01:22:51] Checking for apptainer binary...
[2025-11-19 01:22:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 01:22:51] Running /usr/bin/apptainer --version
[2025-11-19 01:22:51] apptainer version 1.4.1-1.1
[2025-11-19 01:22:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 01:22:51] thA335
[2025-11-19 01:22:51] apptainer works
[2025-11-19 01:22:51] Set ATHENA_PROC_NUMBER=3
[2025-11-19 01:22:51] Set ATHENA_CORE_NUMBER=3
[2025-11-19 01:22:51] Starting ATLAS job with PandaID=6891584508
[2025-11-19 01:22:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 01:27:10]  *** The last 200 lines of the pilot log: ***
[2025-11-19 01:27:10] ANSI_COLOR="0;31"
[2025-11-19 01:27:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 01:27:10] HOME_URL="https://www.centos.org/"
[2025-11-19 01:27:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 01:27:10] 
[2025-11-19 01:27:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 01:27:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 01:27:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 01:27:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 01:27:10] 
[2025-11-19 01:27:10] 2025-11-19 00:26:22,200 | INFO     | ***************************************
[2025-11-19 01:27:10] 2025-11-19 00:26:22,704 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-19 01:27:10] 2025-11-19 00:26:22,717 | INFO     | sufficient remaining disk space (827874869248 B)
[2025-11-19 01:27:10] 2025-11-19 00:26:22,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 01:27:10] 2025-11-19 00:26:22,717 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 01:27:10] 2025-11-19 00:26:22,717 | INFO     | update_server=False
[2025-11-19 01:27:10] 2025-11-19 00:26:22,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 01:27:10] 2025-11-19 00:26:23,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 01:27:10] 2025-11-19 00:26:23,078 | INFO     | aborting loop
[2025-11-19 01:27:10] 2025-11-19 00:26:23,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 01:27:10] 2025-11-19 00:26:23,526 | INFO     | all job control threads have been joined
[2025-11-19 01:27:10] 2025-11-19 00:26:23,701 | INFO     | all data control threads have been joined
[2025-11-19 01:27:10] 2025-11-19 00:26:23,722 | INFO     | [job] retrieve thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:23,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:24,083 | INFO     | [job] job monitor thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:24,100 | INFO     | all payload control threads have been joined
[2025-11-19 01:27:10] 2025-11-19 00:26:24,119 | INFO     | [data] copytool_in thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:24,157 | INFO     | [payload] failed_post thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:24,532 | INFO     | [job] control thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:24,707 | INFO     | [data] control thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,031 | INFO     | [payload] validate_post thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,078 | INFO     | [job] validate thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,079 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,106 | INFO     | [payload] control thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,160 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,223 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,487 | INFO     | [data] copytool_out thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:25,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 01:27:10] 2025-11-19 00:26:25,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 01:27:10] 2025-11-19 00:26:26,698 | INFO     | [job] queue monitor thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:29,797 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 01:27:10] 2025-11-19 00:26:52,690 | INFO     | PID=1639211 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-19 01:27:10] 2025-11-19 00:26:52,690 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 01:27:10] 2025-11-19 00:26:52,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 01:27:10] 2025-11-19 00:26:52,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 01:27:10] 2025-11-19 00:27:03,973 | INFO     | [monitor] cgroup control has ended
[2025-11-19 01:27:10] 2025-11-19 00:27:05,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140654850733888)>', '<ExcThread(monitor, started 140653971355392)>']
[2025-11-19 01:27:10] 2025-11-19 00:27:05,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 01:27:10] 2025-11-19 00:27:05,759 | INFO     | [monitor] control thread has ended
[2025-11-19 01:27:10] 2025-11-19 00:27:10,638 | INFO     | all workflow threads have been joined
[2025-11-19 01:27:10] 2025-11-19 00:27:10,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 01:27:10] 2025-11-19 00:27:10,639 | INFO     | traces error code: 0
[2025-11-19 01:27:10] 2025-11-19 00:27:10,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 01:27:10] 2025-11-19 00:27:10,683 [wrapper] ==== pilot stdout END ====
[2025-11-19 01:27:10] 2025-11-19 00:27:10,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 01:27:10] 2025-11-19 00:27:10,690 [wrapper] pilotpid: 1639211
[2025-11-19 01:27:10] 2025-11-19 00:27:10,693 [wrapper] Pilot exit status: 0
[2025-11-19 01:27:10] 2025-11-19 00:27:10,700 [wrapper] pandaids: 6891584508
[2025-11-19 01:27:10] 2025-11-19 00:27:10,716 [wrapper] cleanup supervisor_pilot 1639217 1639212
[2025-11-19 01:27:10] 2025-11-19 00:27:10,719 [wrapper] Test setup, not cleaning
[2025-11-19 01:27:10] 2025-11-19 00:27:10,722 [wrapper] apfmon messages muted
[2025-11-19 01:27:10] 2025-11-19 00:27:10,725 [wrapper] ==== wrapper stdout END ====
[2025-11-19 01:27:10] 2025-11-19 00:27:10,727 [wrapper] ==== wrapper stderr END ====
[2025-11-19 01:27:10]  *** Error codes and diagnostics ***
[2025-11-19 01:27:10]     "exeErrorCode": 65,
[2025-11-19 01:27:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-19 01:27:10]     "pilotErrorCode": 1305,
[2025-11-19 01:27:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-19 01:27:10]  *** Listing of results directory ***
[2025-11-19 01:27:10] total 404056
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-19 01:27:10] -rwx------ 1 boinc boinc     36292 Nov 18 18:18 runpilot2-wrapper.sh
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:18 queuedata.json
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc       100 Nov 19 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 01:27:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 19 01:22 run_atlas
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc       105 Nov 19 01:22 job.xml
[2025-11-19 01:27:10] -rw-r--r-- 2 boinc boinc 409551589 Nov 19 01:22 EVNT.47493065._000464.pool.root.1
[2025-11-19 01:27:10] -rw-r--r-- 2 boinc boinc    590090 Nov 19 01:22 input.tar.gz
[2025-11-19 01:27:10] -rw-r--r-- 2 boinc boinc     15120 Nov 19 01:22 start_atlas.sh
[2025-11-19 01:27:10] drwxrwx--x 2 boinc boinc      4096 Nov 19 01:22 shared
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc         0 Nov 19 01:22 boinc_setup_complete
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc      6193 Nov 19 01:22 init_data.xml
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc         0 Nov 19 01:22 boinc_lockfile
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc      2769 Nov 19 01:22 pandaJob.out
[2025-11-19 01:27:10] -rw------- 1 boinc boinc    992806 Nov 19 01:23 agis_schedconf.cvmfs.json
[2025-11-19 01:27:10] -rw------- 1 boinc boinc   1525063 Nov 19 01:23 agis_ddmendpoints.agis.ALL.json
[2025-11-19 01:27:10] drwx------ 5 boinc boinc      4096 Nov 19 01:23 pilot3
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc       523 Nov 19 01:23 boinc_task_state.xml
[2025-11-19 01:27:10] -rw------- 1 boinc boinc       955 Nov 19 01:24 memory_monitor_summary.json
[2025-11-19 01:27:10] -rw------- 1 boinc boinc     56344 Nov 19 01:24 log.47493068._004631.job.log.tgz.1
[2025-11-19 01:27:10] -rw------- 1 boinc boinc        95 Nov 19 01:26 pilot_heartbeat.json
[2025-11-19 01:27:10] -rw------- 1 boinc boinc      8391 Nov 19 01:26 heartbeat.json
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc      8192 Nov 19 01:26 boinc_mmap_file
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc        23 Nov 19 01:26 wrapper_checkpoint.txt
[2025-11-19 01:27:10] -rw------- 1 boinc boinc      4752 Nov 19 01:27 pilotlog.txt
[2025-11-19 01:27:10] -rw------- 1 boinc boinc     92659 Nov 19 01:27 log.47493068._004631.job.log.1
[2025-11-19 01:27:10] -rw------- 1 boinc boinc       186 Nov 19 01:27 output.list
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc       620 Nov 19 01:27 runtime_log
[2025-11-19 01:27:10] -rw------- 1 boinc boinc    163840 Nov 19 01:27 result.tar.gz
[2025-11-19 01:27:10] -rw------- 1 boinc boinc       649 Nov 19 01:27 uUxNDmYWef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9zFKDmpH9iSm.diag
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc      8624 Nov 19 01:27 runtime_log.err
[2025-11-19 01:27:10] -rw-r--r-- 1 boinc boinc      8826 Nov 19 01:27 stderr.txt
[2025-11-19 01:27:10] No HITS result produced
[2025-11-19 01:27:10]  *** Contents of shared directory: ***
[2025-11-19 01:27:10] total 400716
[2025-11-19 01:27:10] -rw-r--r-- 2 boinc boinc 409551589 Nov 19 01:22 ATLAS.root_0
[2025-11-19 01:27:10] -rw-r--r-- 2 boinc boinc    590090 Nov 19 01:22 input.tar.gz
[2025-11-19 01:27:10] -rw-r--r-- 2 boinc boinc     15120 Nov 19 01:22 start_atlas.sh
[2025-11-19 01:27:10] -rw------- 1 boinc boinc    163840 Nov 19 01:27 result.tar.gz
01:27:11 (1635475): run_atlas exited; CPU time 30.727440
01:27:11 (1635475): called boinc_finish(0)

</stderr_txt>
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