Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:32:41 (30011): wrapper (7.7.26015): starting
02:32:41 (30011): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 02:32:41] Arguments: --nthreads 8
[2025-11-22 02:32:41] Threads: 8
[2025-11-22 02:32:41] Checking for CVMFS
[2025-11-22 02:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 02:32:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 02:32:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 02:32:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 02:32:43] 2.11.2.0 17493 81311 122512 153154 1 269 13762113 25165824 4024 130560 2 22802353 99.865 13694291 1914 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 02:32:43] CVMFS is ok
[2025-11-22 02:32:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 02:32:43] Checking for apptainer binary...
[2025-11-22 02:32:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 02:32:43] Running /usr/bin/apptainer --version
[2025-11-22 02:32:44] apptainer version 1.3.2-1.el7
[2025-11-22 02:32:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 02:32:47] cg-vwn341.simple-grid.lan
[2025-11-22 02:32:47] apptainer works
[2025-11-22 02:32:47] Set ATHENA_PROC_NUMBER=8
[2025-11-22 02:32:47] Set ATHENA_CORE_NUMBER=8
[2025-11-22 02:32:47] Starting ATLAS job with PandaID=6891594840
[2025-11-22 02:32:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 04:02:03]  *** The last 200 lines of the pilot log: ***
[2025-11-23 04:02:03] 2025-11-23 03:00:54,246 | INFO     | time since job start (91480s) is within the limit (172800.0s)
[2025-11-23 04:02:03] 2025-11-23 03:00:54,613 | INFO     | monitor loop #6141: job 0:6891594840 is in state 'finished'
[2025-11-23 04:02:03] 2025-11-23 03:00:54,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 04:02:03] 2025-11-23 03:00:56,256 | INFO     | time since job start (91482s) is within the limit (172800.0s)
[2025-11-23 04:02:03] 2025-11-23 03:00:57,126 | INFO     | monitor loop #6142: job 0:6891594840 is in state 'finished'
[2025-11-23 04:02:03] 2025-11-23 03:00:57,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 04:02:03] 2025-11-23 03:00:58,263 | INFO     | time since job start (91484s) is within the limit (172800.0s)
[2025-11-23 04:02:03] 2025-11-23 03:00:59,637 | INFO     | monitor loop #6143: job 0:6891594840 is in state 'finished'
[2025-11-23 04:02:03] 2025-11-23 03:00:59,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 04:02:03] 2025-11-23 03:01:00,270 | INFO     | time since job start (91486s) is within the limit (172800.0s)
[2025-11-23 04:02:03] 2025-11-23 03:01:02,143 | INFO     | monitor loop #6144: job 0:6891594840 is in state 'finished'
[2025-11-23 04:02:03] 2025-11-23 03:01:02,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 04:02:03] 2025-11-23 03:01:02,279 | INFO     | time since job start (91488s) is within the limit (172800.0s)
[2025-11-23 04:02:03] 2025-11-23 03:01:04,285 | INFO     | time since job start (91490s) is within the limit (172800.0s)
[2025-11-23 04:02:03] 2025-11-23 03:01:04,649 | INFO     | monitor loop #6145: job 0:6891594840 is in state 'finished'
[2025-11-23 04:02:03] 2025-11-23 03:01:04,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,149 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 04:02:03] 2025-11-23 03:01:05,150 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-23 04:02:03] 2025-11-23 03:01:05,152 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6891594840/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,153 | INFO     | extracted standard info from prmon json
[2025-11-23 04:02:03] 2025-11-23 03:01:05,153 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 04:02:03] 2025-11-23 03:01:05,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 04:02:03] 2025-11-23 03:01:05,182 | INFO     | fitting pss+swap vs Time
[2025-11-23 04:02:03] 2025-11-23 03:01:05,184 | INFO     | sum of square deviations: 1031946013232.1749
[2025-11-23 04:02:03] 2025-11-23 03:01:05,251 | INFO     | sum of deviations: 2584334465804.2427
[2025-11-23 04:02:03] 2025-11-23 03:01:05,252 | INFO     | mean x: 1763821203.3114533
[2025-11-23 04:02:03] 2025-11-23 03:01:05,252 | INFO     | mean y: 2860921.8338914937
[2025-11-23 04:02:03] 2025-11-23 03:01:05,252 | INFO     | intersect: -4414331323.482279
[2025-11-23 04:02:03] 2025-11-23 03:01:05,254 | INFO     | chi2: 15.835822269881358
[2025-11-23 04:02:03] 2025-11-23 03:01:05,256 | INFO     | sum of square deviations: 1021613430623.5455
[2025-11-23 04:02:03] 2025-11-23 03:01:05,323 | INFO     | sum of deviations: 3078355260873.089
[2025-11-23 04:02:03] 2025-11-23 03:01:05,323 | INFO     | mean x: 1763821050.8158603
[2025-11-23 04:02:03] 2025-11-23 03:01:05,323 | INFO     | mean y: 2868211.8944892474
[2025-11-23 04:02:03] 2025-11-23 03:01:05,324 | INFO     | intersect: -5311928606.804033
[2025-11-23 04:02:03] 2025-11-23 03:01:05,325 | INFO     | chi2: 12.624440604474374
[2025-11-23 04:02:03] 2025-11-23 03:01:05,325 | INFO     | current chi2=12.624440604474374 (change=20.279222705819393 %)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,326 | INFO     | right removable region: 1487
[2025-11-23 04:02:03] 2025-11-23 03:01:05,328 | INFO     | sum of square deviations: 1021612236243.5454
[2025-11-23 04:02:03] 2025-11-23 03:01:05,412 | INFO     | sum of deviations: 2111743963970.6768
[2025-11-23 04:02:03] 2025-11-23 03:01:05,412 | INFO     | mean x: 1763821355.8158603
[2025-11-23 04:02:03] 2025-11-23 03:01:05,413 | INFO     | mean y: 2867892.827284946
[2025-11-23 04:02:03] 2025-11-23 03:01:05,413 | INFO     | intersect: -3643074246.0046997
[2025-11-23 04:02:03] 2025-11-23 03:01:05,414 | INFO     | chi2: 13.167942524399587
[2025-11-23 04:02:03] 2025-11-23 03:01:05,415 | INFO     | current chi2=13.167942524399587 (change=16.847118514053385 %)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,415 | INFO     | left removable region: 10
[2025-11-23 04:02:03] 2025-11-23 03:01:05,417 | INFO     | sum of square deviations: 999123376967.5322
[2025-11-23 04:02:03] 2025-11-23 03:01:05,489 | INFO     | sum of deviations: 2607482666069.981
[2025-11-23 04:02:03] 2025-11-23 03:01:05,490 | INFO     | mean x: 1763821325.3202438
[2025-11-23 04:02:03] 2025-11-23 03:01:05,490 | INFO     | mean y: 2878491.1543669603
[2025-11-23 04:02:03] 2025-11-23 03:01:05,490 | INFO     | intersect: -4600290284.433767
[2025-11-23 04:02:03] 2025-11-23 03:01:05,492 | INFO     | chi2: 9.100783992365525
[2025-11-23 04:02:03] 2025-11-23 03:01:05,492 | INFO     | current memory leak: 2.61 B/s (using 1477 data points, chi2=9.10)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,494 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | ..............................
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . Timing measurements:
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . get job = 0 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . initial setup = 10 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . payload setup = 93 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . stage-in = 0 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . payload execution = 91088 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . stage-out = 6 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | . log creation = 2 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,495 | INFO     | ..............................
[2025-11-23 04:02:03] 2025-11-23 03:01:05,666 | INFO     | 
[2025-11-23 04:02:03] 2025-11-23 03:01:05,667 | INFO     | job summary report
[2025-11-23 04:02:03] 2025-11-23 03:01:05,667 | INFO     | --------------------------------------------------
[2025-11-23 04:02:03] 2025-11-23 03:01:05,667 | INFO     | PanDA job id: 6891594840
[2025-11-23 04:02:03] 2025-11-23 03:01:05,667 | INFO     | task id: 47493068
[2025-11-23 04:02:03] 2025-11-23 03:01:05,667 | INFO     | errors: (none)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 04:02:03] 2025-11-23 03:01:05,667 | INFO     | pilot state: finished 
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | transexitcode: 0
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | exeerrorcode: 0
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | exeerrordiag: 
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | exitcode: 0
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | exitmsg: OK
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | cpuconsumptiontime: 333896 s
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | nevents: 1000
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | neventsw: 0
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | pid: 8040
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | pgrp: 8040
[2025-11-23 04:02:03] 2025-11-23 03:01:05,668 | INFO     | corecount: 8
[2025-11-23 04:02:03] 2025-11-23 03:01:05,669 | INFO     | event service: False
[2025-11-23 04:02:03] 2025-11-23 03:01:05,669 | INFO     | sizes: {0: 2298626, 1: 2298825, 12: 2298825, 23: 2298853, 33: 2298881, 44: 2298937, 55: 2299093, 66: 2299121, 76: 2299149, 87: 2299205, 98: 2299233, 102: 2299803, 
[2025-11-23 04:02:03] 2025-11-23 03:01:05,669 | INFO     | --------------------------------------------------
[2025-11-23 04:02:03] 2025-11-23 03:01:05,669 | INFO     | 
[2025-11-23 04:02:03] 2025-11-23 03:01:05,669 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-23 04:02:03] 2025-11-23 03:01:05,885 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,885 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,885 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 04:02:03] 2025-11-23 03:01:05,887 | INFO     | job 6891594840 has completed (purged errors)
[2025-11-23 04:02:03] 2025-11-23 03:01:05,887 | INFO     | overall cleanup function is called
[2025-11-23 04:02:03] 2025-11-23 03:01:06,904 | INFO     | --- collectZombieJob: --- 10, [8040]
[2025-11-23 04:02:03] 2025-11-23 03:01:06,905 | INFO     | zombie collector waiting for pid 8040
[2025-11-23 04:02:03] 2025-11-23 03:01:06,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 04:02:03] 2025-11-23 03:01:06,905 | INFO     | collected zombie processes
[2025-11-23 04:02:03] 2025-11-23 03:01:06,905 | INFO     | will attempt to kill all subprocesses of pid=8040
[2025-11-23 04:02:03] 2025-11-23 03:01:07,044 | INFO     | process IDs to be killed: [8040] (in reverse order)
[2025-11-23 04:02:03] 2025-11-23 03:01:07,922 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 04:02:03] 2025-11-23 03:01:07,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 04:02:03] 2025-11-23 03:01:07,928 | INFO     | did not find any defunct processes belonging to 8040
[2025-11-23 04:02:03] 2025-11-23 03:01:07,932 | INFO     | did not find any defunct processes belonging to 8040
[2025-11-23 04:02:03] 2025-11-23 03:01:07,991 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 04:02:03] 2025-11-23 03:01:07,991 | INFO     | ready for new job
[2025-11-23 04:02:03] 2025-11-23 03:01:07,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 04:02:03] 2025-11-23 03:01:08,004 | INFO     | ***************************************
[2025-11-23 04:02:03] 2025-11-23 03:01:08,004 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 04:02:03] 2025-11-23 03:01:08,004 | INFO     | ***************************************
[2025-11-23 04:02:03] 2025-11-23 03:01:08,004 | INFO     | 
[2025-11-23 04:02:03] 2025-11-23 03:01:08,005 | INFO     | pilot is running in a VM
[2025-11-23 04:02:03] 2025-11-23 03:01:08,005 | INFO     | architecture information:
[2025-11-23 04:02:03] 2025-11-23 03:01:08,012 | INFO     | executing command: cat /etc/os-release
[2025-11-23 04:02:03] 2025-11-23 03:01:08,230 | INFO     | cat /etc/os-release:
[2025-11-23 04:02:03] NAME="CentOS Linux"
[2025-11-23 04:02:03] VERSION="7 (Core)"
[2025-11-23 04:02:03] ID="centos"
[2025-11-23 04:02:03] ID_LIKE="rhel fedora"
[2025-11-23 04:02:03] VERSION_ID="7"
[2025-11-23 04:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 04:02:03] ANSI_COLOR="0;31"
[2025-11-23 04:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 04:02:03] HOME_URL="https://www.centos.org/"
[2025-11-23 04:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 04:02:03] 
[2025-11-23 04:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 04:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 04:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 04:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 04:02:03] 
[2025-11-23 04:02:03] 2025-11-23 03:01:08,231 | INFO     | ***************************************
[2025-11-23 04:02:03] 2025-11-23 03:01:08,735 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-23 04:02:03] 2025-11-23 03:01:08,910 | INFO     | sufficient remaining disk space (495158558720 B)
[2025-11-23 04:02:03] 2025-11-23 03:01:08,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 04:02:03] 2025-11-23 03:01:08,911 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 04:02:03] 2025-11-23 03:01:08,911 | INFO     | update_server=False
[2025-11-23 04:02:03] 2025-11-23 03:01:08,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 04:02:03] 2025-11-23 03:01:08,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 04:02:03] 2025-11-23 03:01:08,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:02:03] 2025-11-23 03:01:08,912 | INFO     | aborting loop
[2025-11-23 04:02:03] 2025-11-23 03:01:09,427 | INFO     | all data control threads have been joined
[2025-11-23 04:02:03] 2025-11-23 03:01:09,555 | INFO     | all job control threads have been joined
[2025-11-23 04:02:03] 2025-11-23 03:01:09,917 | INFO     | [job] retrieve thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:09,919 | INFO     | [job] job monitor thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,033 | INFO     | [data] copytool_in thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,086 | INFO     | [job] validate thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,095 | INFO     | all payload control threads have been joined
[2025-11-23 04:02:03] 2025-11-23 03:01:10,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 04:02:03] 2025-11-23 03:01:10,407 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,434 | INFO     | [data] control thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,482 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,562 | INFO     | [job] control thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:02:03] 2025-11-23 03:01:10,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:10,809 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:11,102 | INFO     | [payload] control thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:11,243 | INFO     | [payload] validate_post thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:11,335 | INFO     | [payload] failed_post thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:11,684 | INFO     | [job] queue monitor thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:12,233 | INFO     | [data] copytool_out thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:12,921 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 04:02:03] 2025-11-23 03:01:37,534 | INFO     | PID=1401 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 04:02:03] 2025-11-23 03:01:37,534 | INFO     | .. there are 9 such processes running
[2025-11-23 04:02:03] 2025-11-23 03:01:37,535 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 04:02:03] 2025-11-23 03:01:37,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 04:02:03] 2025-11-23 03:01:37,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 04:02:03] 2025-11-23 03:01:53,414 | INFO     | [monitor] cgroup control has ended
[2025-11-23 04:02:03] 2025-11-23 03:01:53,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448503154496)>', '<ExcThread(monitor, started 140447779387136)>']
[2025-11-23 04:02:03] 2025-11-23 03:01:54,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 04:02:03] 2025-11-23 03:01:54,636 | INFO     | [monitor] control thread has ended
[2025-11-23 04:02:03] 2025-11-23 03:01:58,977 | INFO     | all workflow threads have been joined
[2025-11-23 04:02:03] 2025-11-23 03:01:58,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 04:02:03] 2025-11-23 03:01:58,978 | INFO     | traces error code: 0
[2025-11-23 04:02:03] 2025-11-23 03:01:58,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 04:02:03] 2025-11-23 03:01:59,377 [wrapper] ==== pilot stdout END ====
[2025-11-23 04:02:03] 2025-11-23 03:01:59,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 04:02:03] 2025-11-23 03:01:59,465 [wrapper] pilotpid: 1401
[2025-11-23 04:02:03] 2025-11-23 03:01:59,541 [wrapper] Pilot exit status: 0
[2025-11-23 04:02:03] 2025-11-23 03:01:59,910 [wrapper] pandaids: 6891594840
[2025-11-23 04:02:03] 2025-11-23 03:02:01,043 [wrapper] cleanup supervisor_pilot 23728 1402
[2025-11-23 04:02:03] 2025-11-23 03:02:01,119 [wrapper] Test setup, not cleaning
[2025-11-23 04:02:03] 2025-11-23 03:02:01,192 [wrapper] apfmon messages muted
[2025-11-23 04:02:03] 2025-11-23 03:02:01,210 [wrapper] ==== wrapper stdout END ====
[2025-11-23 04:02:03] 2025-11-23 03:02:01,245 [wrapper] ==== wrapper stderr END ====
[2025-11-23 04:02:03]  *** Error codes and diagnostics ***
[2025-11-23 04:02:03]     "exeErrorCode": 0,
[2025-11-23 04:02:03]     "exeErrorDiag": "",
[2025-11-23 04:02:03]     "pilotErrorCode": 0,
[2025-11-23 04:02:03]     "pilotErrorDiag": "",
[2025-11-23 04:02:03]  *** Listing of results directory ***
[2025-11-23 04:02:03] total 1325880
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc    576529 Nov 18 19:36 pilot3.tar.gz
[2025-11-23 04:02:03] -rwx------. 1 boinc boinc     36292 Nov 18 19:45 runpilot2-wrapper.sh
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc      5112 Nov 18 19:45 queuedata.json
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc       100 Nov 22 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 04:02:03] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 02:32 run_atlas
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc       105 Nov 22 02:32 job.xml
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc      6393 Nov 22 02:32 init_data.xml
[2025-11-23 04:02:03] -rw-r--r--. 2 boinc boinc 406177566 Nov 22 02:32 EVNT.47493065._000767.pool.root.1
[2025-11-23 04:02:03] -rw-r--r--. 2 boinc boinc     15120 Nov 22 02:32 start_atlas.sh
[2025-11-23 04:02:03] drwxrwx--x. 2 boinc boinc        68 Nov 22 02:32 shared
[2025-11-23 04:02:03] -rw-r--r--. 2 boinc boinc    590095 Nov 22 02:32 input.tar.gz
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc         0 Nov 22 02:32 boinc_lockfile
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc      2773 Nov 22 02:32 pandaJob.out
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc    989798 Nov 22 02:36 agis_schedconf.cvmfs.json
[2025-11-23 04:02:03] drwx------. 5 boinc boinc      4096 Nov 22 02:36 pilot3
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc       533 Nov 23 03:36 boinc_task_state.xml
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc 918207221 Nov 23 03:58 HITS.47493068._006312.pool.root.1
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc      1030 Nov 23 03:59 memory_monitor_summary.json
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc   1526164 Nov 23 03:59 agis_ddmendpoints.agis.ALL.json
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc   2553643 Nov 23 03:59 log.47493068._006312.job.log.tgz.1
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc        95 Nov 23 04:00 pilot_heartbeat.json
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc      8628 Nov 23 04:01 heartbeat.json
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc      8192 Nov 23 04:01 boinc_mmap_file
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc        29 Nov 23 04:01 wrapper_checkpoint.txt
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc      4884 Nov 23 04:01 pilotlog.txt
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc  12150551 Nov 23 04:02 log.47493068._006312.job.log.1
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc       353 Nov 23 04:02 output.list
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc       620 Nov 23 04:02 runtime_log
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc  14725120 Nov 23 04:02 result.tar.gz
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc      8717 Nov 23 04:02 runtime_log.err
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc       662 Nov 23 04:02 LkuMDm3sff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhJGKDmQ4IaMo.diag
[2025-11-23 04:02:03] -rw-r--r--. 1 boinc boinc     21441 Nov 23 04:02 stderr.txt
[2025-11-23 04:02:03] HITS file was successfully produced:
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc 918207221 Nov 23 03:58 shared/HITS.pool.root.1
[2025-11-23 04:02:03]  *** Contents of shared directory: ***
[2025-11-23 04:02:03] total 1308324
[2025-11-23 04:02:03] -rw-r--r--. 2 boinc boinc 406177566 Nov 22 02:32 ATLAS.root_0
[2025-11-23 04:02:03] -rw-r--r--. 2 boinc boinc     15120 Nov 22 02:32 start_atlas.sh
[2025-11-23 04:02:03] -rw-r--r--. 2 boinc boinc    590095 Nov 22 02:32 input.tar.gz
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc 918207221 Nov 23 03:58 HITS.pool.root.1
[2025-11-23 04:02:03] -rw-------. 1 boinc boinc  14725120 Nov 23 04:02 result.tar.gz
04:02:05 (30011): run_atlas exited; CPU time 334432.271371
04:02:05 (30011): called boinc_finish(0)

</stderr_txt>
]]>

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