Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:43:20 (1448078): wrapper (7.7.26015): starting
00:43:20 (1448078): wrapper: running run_atlas (--nthreads 3)
[2025-11-19 00:43:20] Arguments: --nthreads 3
[2025-11-19 00:43:20] Threads: 3
[2025-11-19 00:43:20] Checking for CVMFS
[2025-11-19 00:43:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 00:43:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 00:43:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 00:43:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 00:43:21] 2.9.2.0 4099368 324 65916 153021 0 88 34183416 36864001 0 130560 0 4634905 99.970 145365 7857 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-19 00:43:21] CVMFS is ok
[2025-11-19 00:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 00:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 00:43:21] Further information can be found at the LHC@home message board.
[2025-11-19 00:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 00:43:21] Checking for apptainer binary...
[2025-11-19 00:43:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 00:43:21] Running /usr/bin/apptainer --version
[2025-11-19 00:43:21] apptainer version 1.4.1-1.1
[2025-11-19 00:43:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 00:43:21] thA335
[2025-11-19 00:43:21] apptainer works
[2025-11-19 00:43:21] Set ATHENA_PROC_NUMBER=3
[2025-11-19 00:43:21] Set ATHENA_CORE_NUMBER=3
[2025-11-19 00:43:21] Starting ATLAS job with PandaID=6891592412
[2025-11-19 00:43:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 00:47:39]  *** The last 200 lines of the pilot log: ***
[2025-11-19 00:47:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 00:47:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 00:47:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 00:47:39] 
[2025-11-19 00:47:39] 2025-11-18 23:46:46,688 | INFO     | ***************************************
[2025-11-19 00:47:39] 2025-11-18 23:46:47,191 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-19 00:47:39] 2025-11-18 23:46:47,204 | INFO     | sufficient remaining disk space (827876966400 B)
[2025-11-19 00:47:39] 2025-11-18 23:46:47,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 00:47:39] 2025-11-18 23:46:47,204 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 00:47:39] 2025-11-18 23:46:47,204 | INFO     | update_server=False
[2025-11-19 00:47:39] 2025-11-18 23:46:47,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 00:47:39] 2025-11-18 23:46:47,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 00:47:39] 2025-11-18 23:46:47,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 00:47:39] 2025-11-18 23:46:47,205 | INFO     | aborting loop
[2025-11-19 00:47:39] 2025-11-18 23:46:47,232 | INFO     | all data control threads have been joined
[2025-11-19 00:47:39] 2025-11-18 23:46:47,486 | INFO     | all job control threads have been joined
[2025-11-19 00:47:39] 2025-11-18 23:46:48,210 | INFO     | [job] retrieve thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:48,211 | INFO     | [job] queue monitor thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:48,211 | INFO     | [job] job monitor thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:48,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 00:47:39] 2025-11-18 23:46:48,238 | INFO     | [data] control thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:48,272 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:48,492 | INFO     | [job] control thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:48,521 | INFO     | [payload] failed_post thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:48,641 | INFO     | all payload control threads have been joined
[2025-11-19 00:47:39] 2025-11-18 23:46:49,270 | INFO     | [payload] validate_post thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:49,356 | INFO     | [data] copytool_in thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:49,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:49,624 | INFO     | [job] validate thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:49,647 | INFO     | [payload] control thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:49,648 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:49,697 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:50,234 | INFO     | [data] copytool_out thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:46:50,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 00:47:39] 2025-11-18 23:46:54,358 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 00:47:39] 2025-11-18 23:47:17,879 | INFO     | PID=1451813 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-19 00:47:39] 2025-11-18 23:47:17,879 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 00:47:39] 2025-11-18 23:47:17,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 00:47:39] 2025-11-18 23:47:17,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 00:47:39] 2025-11-18 23:47:32,891 | INFO     | [monitor] cgroup control has ended
[2025-11-19 00:47:39] 2025-11-18 23:47:33,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716195239744)>', '<ExcThread(monitor, started 139715479070464)>']
[2025-11-19 00:47:39] 2025-11-18 23:47:34,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 00:47:39] 2025-11-18 23:47:34,969 | INFO     | [monitor] control thread has ended
[2025-11-19 00:47:39] 2025-11-18 23:47:38,991 | INFO     | all workflow threads have been joined
[2025-11-19 00:47:39] 2025-11-18 23:47:38,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 00:47:39] 2025-11-18 23:47:38,992 | INFO     | traces error code: 0
[2025-11-19 00:47:39] 2025-11-18 23:47:38,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 00:47:39] 2025-11-18 23:47:39,038 [wrapper] ==== pilot stdout END ====
[2025-11-19 00:47:39] 2025-11-18 23:47:39,041 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 00:47:39] 2025-11-18 23:47:39,044 [wrapper] pilotpid: 1451813
[2025-11-19 00:47:39] 2025-11-18 23:47:39,047 [wrapper] Pilot exit status: 0
[2025-11-19 00:47:39] 2025-11-18 23:47:39,054 [wrapper] pandaids: 6891592412
[2025-11-19 00:47:39] 2025-11-18 23:47:39,071 [wrapper] cleanup supervisor_pilot 1451819 1451814
[2025-11-19 00:47:39] 2025-11-18 23:47:39,073 [wrapper] Test setup, not cleaning
[2025-11-19 00:47:39] 2025-11-18 23:47:39,076 [wrapper] apfmon messages muted
[2025-11-19 00:47:39] 2025-11-18 23:47:39,078 [wrapper] ==== wrapper stdout END ====
[2025-11-19 00:47:39] 2025-11-18 23:47:39,081 [wrapper] ==== wrapper stderr END ====
[2025-11-19 00:47:39]  *** Error codes and diagnostics ***
[2025-11-19 00:47:39]     "exeErrorCode": 65,
[2025-11-19 00:47:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-19 00:47:39]     "pilotErrorCode": 1305,
[2025-11-19 00:47:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-19 00:47:39]  *** Listing of results directory ***
[2025-11-19 00:47:39] total 403912
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc    576529 Nov 18 18:59 pilot3.tar.gz
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc      5112 Nov 18 19:23 queuedata.json
[2025-11-19 00:47:39] -rwx------ 1 boinc boinc     36292 Nov 18 19:23 runpilot2-wrapper.sh
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc       100 Nov 19 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 00:47:39] -rwxr-xr-x 1 boinc boinc      7986 Nov 19 00:43 run_atlas
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc       105 Nov 19 00:43 job.xml
[2025-11-19 00:47:39] -rw-r--r-- 2 boinc boinc 409408425 Nov 19 00:43 EVNT.47493065._000647.pool.root.1
[2025-11-19 00:47:39] -rw-r--r-- 2 boinc boinc    590093 Nov 19 00:43 input.tar.gz
[2025-11-19 00:47:39] -rw-r--r-- 2 boinc boinc     15120 Nov 19 00:43 start_atlas.sh
[2025-11-19 00:47:39] drwxrwx--x 2 boinc boinc      4096 Nov 19 00:43 shared
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc         0 Nov 19 00:43 boinc_setup_complete
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc      6193 Nov 19 00:43 init_data.xml
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc         0 Nov 19 00:43 boinc_lockfile
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc      2773 Nov 19 00:43 pandaJob.out
[2025-11-19 00:47:39] -rw------- 1 boinc boinc    992790 Nov 19 00:43 agis_schedconf.cvmfs.json
[2025-11-19 00:47:39] -rw------- 1 boinc boinc   1525063 Nov 19 00:43 agis_ddmendpoints.agis.ALL.json
[2025-11-19 00:47:39] drwx------ 5 boinc boinc      4096 Nov 19 00:43 pilot3
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc       523 Nov 19 00:44 boinc_task_state.xml
[2025-11-19 00:47:39] -rw------- 1 boinc boinc       955 Nov 19 00:44 memory_monitor_summary.json
[2025-11-19 00:47:39] -rw------- 1 boinc boinc     55818 Nov 19 00:44 log.47493068._005965.job.log.tgz.1
[2025-11-19 00:47:39] -rw------- 1 boinc boinc        95 Nov 19 00:46 pilot_heartbeat.json
[2025-11-19 00:47:39] -rw------- 1 boinc boinc      8403 Nov 19 00:46 heartbeat.json
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc      8192 Nov 19 00:47 boinc_mmap_file
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc        22 Nov 19 00:47 wrapper_checkpoint.txt
[2025-11-19 00:47:39] -rw------- 1 boinc boinc      4752 Nov 19 00:47 pilotlog.txt
[2025-11-19 00:47:39] -rw------- 1 boinc boinc     93146 Nov 19 00:47 log.47493068._005965.job.log.1
[2025-11-19 00:47:39] -rw------- 1 boinc boinc       186 Nov 19 00:47 output.list
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc       620 Nov 19 00:47 runtime_log
[2025-11-19 00:47:39] -rw------- 1 boinc boinc    163840 Nov 19 00:47 result.tar.gz
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc      8624 Nov 19 00:47 runtime_log.err
[2025-11-19 00:47:39] -rw------- 1 boinc boinc       649 Nov 19 00:47 PE0KDm3Xff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3EGKDmiBsbdn.diag
[2025-11-19 00:47:39] -rw-r--r-- 1 boinc boinc      8529 Nov 19 00:47 stderr.txt
[2025-11-19 00:47:39] No HITS result produced
[2025-11-19 00:47:39]  *** Contents of shared directory: ***
[2025-11-19 00:47:39] total 400576
[2025-11-19 00:47:39] -rw-r--r-- 2 boinc boinc 409408425 Nov 19 00:43 ATLAS.root_0
[2025-11-19 00:47:39] -rw-r--r-- 2 boinc boinc    590093 Nov 19 00:43 input.tar.gz
[2025-11-19 00:47:39] -rw-r--r-- 2 boinc boinc     15120 Nov 19 00:43 start_atlas.sh
[2025-11-19 00:47:39] -rw------- 1 boinc boinc    163840 Nov 19 00:47 result.tar.gz
00:47:40 (1448078): run_atlas exited; CPU time 31.636551
00:47:40 (1448078): called boinc_finish(0)

</stderr_txt>
]]>

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